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Oryza sativa
cluster # 4563 cluster # 4563       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4563#0 length = 863 sequences # 3  

consensusID : consensus_4563#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 863
fasta sequence
                              [TCAGTCTCACGGTTTCTGCTTTCCCATCCGCCGCGGCCATGGCGCTCGTCACCGTCCACGCGCGCCTCGCCGCCGCCGCCTCCTCCGCCTCGCCGCCGCTTCGCTCCGCCGCCTCCTGCACCCGCCTCCGTGCCCTCAGTACAGTCACCGGAACCCGCCTCAGCATTCGGCACCAACAGCGCCGGCGCTGGCGGCGGCCGAGGCGCGCCGCCGCCATCGCCGCGTCGCTCGACCTCAACGAGGACAACGTCCGCCTCGCCATCGACGAAGCCAAGGCCGAGCTGGGTCAGCTGTTCGACACATCGGTGGGAATCACAGGGCAAGTTGATCTCGCGGAGCTGGACGGGCCGTTCGTGAAGCTCCGGCTCAAGGGCAAGTTCTGGCACACCCGCGCCACCGTGCTCGCGCGGATCGGCAACTACCTCAAGAACCGCATCCCGGAAATCTTGGAAGTGGAGATAGAAGATGAGAAGCAGCTTGATGATAGCCCTGCAGCCTTCTGAGTGGCATTCACCAGTCAATGGCTCCCTCCAATGCACATTGCACAAACCTGAATTTCTGAAGTTAAGCTGAAGAACCAAGTCTGCTGGAATGCACTATCCTACATTCCTACCTTACTTTTCTGGTCAACATCGCACAAATTCAGGGATCTCCAATTCCCCTACATTTTGATTGTGGAGATGCGTATGATTTGAGACTATTCTATTTTACTAGCACTCACGAGTCGCAAGAACCTGAAAACTGTACTGACGGGACCTACTTACGGAGAGGTTTATTAGACGCTTTTCCTGATTCTGAGCTTGTTGGTATCACCTTTATGTGTATTTATTTAAAAAAAGGGTGTAGCAATGATGTGCTGCTAT]

[+] EMBL CF326671             [TCAGTCTCACGGTTTCTGCTTTCCCATCCGCCGCGGCCATGGCGCTCGTCACCGTCCACGCGCGCCTCGCCGCCGCCGCCTCCTCCGCCTCGCCGCCGCTTCGCTCCGCCGCCTCCTGCACCCGCCTCCGTGCCCTCAGTACAGTCACCGGAACCCGCCTCAGCATTCGGCACCAACAGCGCCGGCGCTGGCGGNGGCCGAGGCGCGCCGCCGCCATCGCCGCGTCGCTCGACCTCAACGAGGACAACGTCCGCCTCGCCATCGACGAATCCAAGGCCGAGCTGGGTCAGCTGCTCGACACATCGGTGGGAATCACAGGGCAAGGTGATCTCGCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK062669             [                         ATCCGCCGCGGCCATGGCGCTCGTCACCGTCCACGCGCGCCTCGCCGCCGCCGCCTCCTCCGCCTCGCCGCCGCTTCGCTCCGCCGCCTCCTGCACCCGCCTCCGTGCCCTCAGTACAGTCACCGGAACCCGCCTCAGCATTCGGCACCAACAGCGCCGGCGCTGGCGGCGGCCGAGGCGCGCCGCCGCCATCGCCGCGTCGCTCGACCTCAACGAGGACAACGTCCGCCTCGCCATCGACGAAGCCAAGGCCGAGCTGGGTCAGCTGTTCGACACATCGGTGGGAATCACAGGGCAAGTTGATCTCGCGGAGCTGGACGGGCCGTTCGTGAAGCTCCGGCTCAAGGGCAAGTTCTGGCACACCCGCGCCACCGTGCTCGCGCGGATCGGCAACTACCTCAAGAACCGCATCCCGGAAATCTTGGAAGTGGAGATAGAAGATGAGAAGCAGCTTGATGATAGCCCTGCAGCCTTCTGAGTGGCATTCACCAGTCAATGGCTCCCTCCAATGCACATTGCACAAACCTGAATTTCTGAAGTTAAGCTGAAGAACCAAGTCTGCTGGAATGCACTATCCTACATTCCTACCTTACTTTTCTGGTCAACATCGCACAAATTCAGGGATCTCCAATTCCCCTACATTTTGATTGTGGAGATGCGTATGATTTGAGACTATTCTATTTTACTAGCACTCACGAGTCGCAAGAACCTGAAAACTGTACTGACGGGACCTACTTACGGAGAGGTTTATTAGACGCTTTTCCTGATTCTGAGCTTGTTGGTATCACCTTTATGTGTATTTATTTAAAAAAAGGGTGTAGCAATGATGTGCTGCTAT]
[+] EMBL CF325832             [                                     CATGGCGCTCGTCACCGTCCACGCGCGCCTCGCCGCCGCCGCCTCCTCCGCCTCGCCGCCGCTTCGCTCCGCCGCCTCCTGCACCCGCCTCCGTGCCCTCAGTACAGTCACCGGAACCCGCCTCAGCATTCGGCACCAACAGCGCCGGCGCTGGCGGCGGCCGAGGCGCGCCGCCGCCATCGCCGCGTCGCTCGACCTCAACGAGGACAACGTCCGCCTCGCCATCGACGAAGCCAAGGCCGAGCTGGGTCAGCTGTTCGACACATCGGTGGGAATCACAGGGCAAGTTGATCTCGCGGAGCTGGACGGGCCGTTCGTGAAGCTCCGGCTCAAGGGCAAGTTCTGGCACACCCGCGCCACCGTGCTCGCGCGGATCGGCAACTACCTCAAGAACCGCATCCCGGAAATCTTGGAAGTGGAGATAGAAGATGAGAAGCAGCTTGATGATAGCCCTGCAGCCTTCTGAGTGGCATTCACCAGTCAATGGCTCCCTCCAATGCACATTGCACAAACCTGAATTTCTGAGGTTAAGCTGAA                                                                                                                                                                                                                                                                                                 ]


>consensus_4563#0 TCAGTCTCACGGTTTCTGCTTTCCCATCCGCCGCGGCCATGGCGCTCGTCACCGTCCACG CGCGCCTCGCCGCCGCCGCCTCCTCCGCCTCGCCGCCGCTTCGCTCCGCCGCCTCCTGCA CCCGCCTCCGTGCCCTCAGTACAGTCACCGGAACCCGCCTCAGCATTCGGCACCAACAGC GCCGGCGCTGGCGGCGGCCGAGGCGCGCCGCCGCCATCGCCGCGTCGCTCGACCTCAACG AGGACAACGTCCGCCTCGCCATCGACGAAGCCAAGGCCGAGCTGGGTCAGCTGTTCGACA CATCGGTGGGAATCACAGGGCAAGTTGATCTCGCGGAGCTGGACGGGCCGTTCGTGAAGC TCCGGCTCAAGGGCAAGTTCTGGCACACCCGCGCCACCGTGCTCGCGCGGATCGGCAACT ACCTCAAGAACCGCATCCCGGAAATCTTGGAAGTGGAGATAGAAGATGAGAAGCAGCTTG ATGATAGCCCTGCAGCCTTCTGAGTGGCATTCACCAGTCAATGGCTCCCTCCAATGCACA TTGCACAAACCTGAATTTCTGAAGTTAAGCTGAAGAACCAAGTCTGCTGGAATGCACTAT CCTACATTCCTACCTTACTTTTCTGGTCAACATCGCACAAATTCAGGGATCTCCAATTCC CCTACATTTTGATTGTGGAGATGCGTATGATTTGAGACTATTCTATTTTACTAGCACTCA CGAGTCGCAAGAACCTGAAAACTGTACTGACGGGACCTACTTACGGAGAGGTTTATTAGA CGCTTTTCCTGATTCTGAGCTTGTTGGTATCACCTTTATGTGTATTTATTTAAAAAAAGG GTGTAGCAATGATGTGCTGCTAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)