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Oryza sativa
cluster # 4581 cluster # 4581       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4581#0 length = 2894 sequences # 3  

consensusID : consensus_4581#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2894
fasta sequence
                              [TTTCCACACCCGTTATTCCCAACCGCATCGCGTCGCGTCGCCGGCTCAAGCAAACGCACCGGCGCCTCTCGCCGTCGCCGTCGCCGCCATCTACCAGCGCCTTCTTCTCCGGCGCATCCGTTTCACGCCCTCTCACTTCCTCGCCGGTTTCCACGGAGGAGGGAGCGATCCAATCCTCCGAGGAGGCGGCGGCGGCTGCGGGATCGCGGGATTCGTCGTTCGATCTGTGTGGCTGCGGGTGCGGGGGGGTGTGGTCGATGGCGGCGGCGGCGTCCAGGAAGGAGGAGGAGAGGAACGAGCGGGTCGTGAGGGGGCTCCTCAAGCTGCCGCCCAACCGCAGATGCATCAACTGCAACGGCCTCGGGCCGCAGTACGTGTGCACGAGCTTCTGGACATTCGTCTGCATCTCCTGCAGCGGCATCCACCGTGAGTTCACGCACCGTGTGAAGTCAGTATCTATGTCGACGTTCACCACGCAAGAGGTCGAGGCCCTCCAGAACGGTGGGAATCAAAGAGCCAGAGAATCGTTCTTAAAGGAATTTGATGCTCAGAAAATGAGGCTACCTGATAGCAGCAATGTCGACAGTCTTAGGGAATTCATAAAAGCTGTTTATGTGGAGAGAAGGTATGCTGGTGGAAGGTTTTCTGAAAGGCCTCCAAGAGATAAACAGAATCAAAAGAACAATGAACAAGAGCATAGAAGGGCTAGTTCGTACCATTCATTTTCTCAGAGCCCACCTTATGATTACCAATACGAAGAAAGACGCAATGGCAAGCAATCCGTGATGCTAACTAGGAAACCTGGTTCAGATAGGGGGCATGATGGGAAGATGTCTGGATTTGCTTACAGTCCACAGAGCCTGCATGAGAGGATGTCAGAAGACCGATTTGCCAATGAGAATTCTGGACCAAGAATTTCTGACTGCTCAGGGTCAAGCATCAGTAATACATTTAGAACGACACCACACTCACCGAATTTCCTTGATAAAGGGTGTTCCAGCCCCTCTATGCAACAAAATCAATCAAACATACAGGCTTCTAGTGGAATCACTCAATCTGAGAGAACTATATCAACAGGAAACATAGATTCGTCATCTACAAAATCAAGCAAATCAAGCTTAGCTGATATGTTTTTTGAATCTGATATTGCTCATAGAACTCAGCAAACGAAGGATTGCATTACTCCAAGTTTCACAGCTTTCTCTGATGTTGCCAACATTGCACAGAAAGATCTCCTTAATGAGCCTGTTGCGCAGCAACAACCTGTAACTGGTTTGGATCAACCAGTAGATTTTTTTGCTAGCATGCCTCCGGCAACTCCATCCACTGATAGAATGCTCACAGCAGCTCCATCAATGGACAATGCTGGGTGGGCTACATTTGACACACCACCAGAAGAAAAGCAACCTGGAGTGATTGGGCTTTCTGGCATTTCCGTAATGGATAAACATGCTTTGAGTGGTGATTTGTTTTCGTTTGAACCAAATAATGATCAACCAACGTGGCTCCAGAGCTCAAAGACATCAAAAAATAATGCTTCTGTGACTGATCAGTCTGATGTACCTTGTAAATATACATCCTCTGATGCAAGTAATTCTCAGGCTTGGAGTGCTTTTGAGGCCAAAAGTGTTAGCACCCAACAAGCCTCGCCAGATCTTTCACTAATGAGTTCTATAGAACCTAAAGAACCAATTGATGAAAATAAATTGCAGCTCTGGCATTCATTCGATGATGCAAGTGAGACTATGACTCTCAATCTGTCCAATGCTCAGCTGCAAACTAATGAGCACAAGAATGTTGATAACAATTCCCTAACAACAAGCAATCCATTTACTTGCTCCATAACGTCAAAGGTACCCCTTTGCTCCATAACAACCTAATATATTTTTCCGTCATGTAGGAATCTCGTGGTAATGATTCCCAAGAAATTTTCATGGGTGGATTAGCTCCTAGCGAACCCTTTGCTCCATTCCCTGAGCCATCACTGTTTGCTACTACTTCCGTGGGAGAAGCCTCTGTACAGCAGATGCCGTTGAATCCATTTGATCTTCCATTTGATGCTGACTCGGATTCTCCAGATATGTTTATGGATGTGACAGCGTTGCAAGCGGTTTTGCCTAATGCTGACCTATCAACTTCTTTCGTTGATGGTTTGCCGGAAACATGGTTCTCCAACAATGCGTCCGCTTATGTTCCACCGGGGTCACATGGTGGACCTCCATGCCTTGTCGAGCAAATCCCCAACTCTGCACTCAGGAACATAACATTGAGCGCTGTATCAACTGGAAATCCTTTTGCATAGAAAATGGCCTCAGCCTTCAGTTTACAAACTAGAAAAGCTAAAGGCTCGGTAAAATCCTTTTCCAAAAAGCAGCTCACCAGTCACCACCAAATTACAAATTGGTGTGTGATTCCGTCCTTTGGTTAGTGAAACTATGCATATGTACAAACAAGGAGGAACATCGTGAAGGGGACTGTGCGGAGAAATTTTGCACACATATGGTACAAACCAAGGAGGAACATCATGAAGGGGACTATACGGATAGGATAGGATGCGACTCGTTGGTTGTGGCAAATGACAAGCTCGGATGTGGGAAATGGTAGACTTTCTCACAAATCTTATCAACAACTGAAAATCAGTTTTAGTGTATTTTCTTTAGGCAAATGTGTACGGATACCATTGCTCCTTGGAGCTATAGTGCAGCATGTTAGCTGCGGAGTTCACTGGAAAGATTTTTTTTTTTTTTGTGGAAGTGATTATTTAGATTCCTCGGTATATGGATCAGTCCCAGAATCCTATTTTCAGTTTTTTTTGGACTAAACTAACATTATAGATTGTCTTCATTTCCACAATAGATCTGAGAATTCGTTTTTTTTAACAAAAATCTAAGAAG]

[+] EMBL AK066439             [TTTCCACACCCGTTATTCCCAACCGCATCGCGTCGCGTCGCCGGCTCAAGCAAACGCACCGGCGCCTCTCGCCGTCGCCGTCGCCGCCATCTACCAGCGCCTTCTTCTCCGGCGCATCCGTTTCACGCCCTCTCACTTCCTCGCCGGTTTCCACGGAGGAGGGAGCGATCCAATCCTCCGAGGAGGCGGCGGCGGCTGCGGGATCGCGGGATTCGTCGTTCGATCTGTGTGGCTGCGGGTGCGGGGGGGTGTGGTCGATGGCGGCGGCGGCGTCCAGGAAGGAGGAGGAGAGGAACGAGCGGGTCGTGAGGGGGCTCCTCAAGCTGCCGCCCAACCGCAGATGCATCAACTGCAACGGCCTCGGGCCGCAGTACGTGTGCACGAGCTTCTGGACATTCGTCTGCATCTCCTGCAGCGGCATCCACCGTGAGTTCACGCACCGTGTGAAGTCAGTATCTATGTCGACGTTCACCACGCAAGAGGTCGAGGCCCTCCAGAACGGTGGGAATCAAAGAGCCAGAGAATCGTTCTTAAAGGAATTTGATGCTCAGAAAATGAGGCTACCTGATAGCAGCAATGTCGACAGTCTTAGGGAATTCATAAAAGCTGTTTATGTGGAGAGAAGGTATGCTGGTGGAAGGTTTTCTGAAAGGCCTCCAAGAGATAAACAGAATCAAAAGAACAATGAACAAGAGCATAGAAGGGCTAGTTCGTACCATTCATTTTCTCAGAGCCCACCTTATGATTACCAATACGAAGAAAGACGCAATGGCAAGCAATCCGTGATGCTAACTAGGAAACCTGGTTCAGATAGGGGGCATGATGGGAAGATGTCTGGATTTGCTTACAGTCCACAGAGCCTGCATGAGAGGATGTCAGAAGACCGATTTGCCAATGAGAATTCTGGACCAAGAATTTCTGACTGCTCAGGGTCAAGCATCAGTAATACATTTAGAACGACACCACACTCACCGAATTTCCTTGATAAAGGGTGTTCCAGCCCCTCTATGCAACAAAATCAATCAAACATACAGGCTTCTAGTGGAATCACTCAATCTGAGAGAACTATATCAACAGGAAACATAGATTCGTCATCTACAAAATCAAGCAAATCAAGCTTAGCTGATATGTTTTTTGAATCTGATATTGCTCATAGAACTCAGCAAACGAAGGATTGCATTACTCCAAGTTTCACAGCTTTCTCTGATGTTGCCAACATTGCACAGAAAGATCTCCTTAATGAGCCTGTTGCGCAGCAACAACCTGTAACTGGTTTGGATCAACCAGTAGATTTTTTTGCTAGCATGCCTCCGGCAACTCCATCCACTGATAGAATGCTCACAGCAGCTCCATCAATGGACAATGCTGGGTGGGCTACATTTGACACACCACCAGAAGAAAAGCAACCTGGAGTGATTGGGCTTTCTGGCATTTCCGTAATGGATAAACATGCTTTGAGTGGTGATTTGTTTTCGTTTGAACCAAATAATGATCAACCAACGTGGCTCCAGAGCTCAAAGACATCAAAAAATAATGCTTCTGTGACTGATCAGTCTGATGTACCTTGTAAATATACATCCTCTGATGCAAGTAATTCTCAGGCTTGGAGTGCTTTTGAGGCCAAAAGTGTTAGCACCCAACAAGCCTCGCCAGATCTTTCACTAATGAGTTCTATAGAACCTAAAGAACCAATTGATGAAAATAAATTGCAGCTCTGGCATTCATTCGATGATGCAAGTGAGACTATGACTCTCAATCTGTCCAATGCTCAGCTGCAAACTAATGAGCACAAGAATGTTGATAACAATTCCCTAACAACAAGCAATCCATTTACTTGCTCCATAACGTCAAAGGTACCCCTTTGCTCCATAACAACCTAATATATTTTTCCGTCATGTAGGAATCTCGTGGTAATGATTCCCAAGAAATTTTCATGGGTGGATTAGCTCCTAGCGAACCCTTTGCTCCATTCCCTGAGCCATCACTGTTTGCTACTACTTCCGTGGGAGAAGCCTCTGTACAGCAGATGCCGTTGAATCCATTTGATCTTCCATTTGATGCTGACTCGGATTCTCCAGATATGTTTATGGATGTGACAGCGTTGCAAGCGGTTTTGCCTAATGCTGACCTATCAACTTCTTTCGTTGATGGTTTGCCGGAAACATGGTTCTCCAACAATGCGTCCGCTTATGTTCCACCGGGGTCACATGGTGGACCTCCATGCCTTGTCGAGCAAATCCCCAACTCTGCACTCAGGAACATAACATTGAGCGCTGTATCAACTGGAAATCCTTTTGCATAGAAAATGGCCTCAGCCTTCAGTTTACAAACTAGAAAAGCTAAAGGCTCGGTAAAATCCTTTTCCAAAAAGCAGCTCACCAGTCACCACCAAATTACAAATTGGTGTGTGATTCCGTCCTTTGGTTAGTGAAACTATGCATATGTACAAACAAGGAGGAACATCGTGAAGGGGACTGTGCGGAGAAATTTTGCACACATATGGTACAAACCAAGGAGGAACATCATGAAGGGGACTATACGGATAGGATAGGATGCGACTCGTTGGTTGTGGCAAATGACAAGCTCGGATGTGGGAAATGGTAGACTTTCTCACAAATCTTATCAACAACTGAAAATCAGTTTTAGTGTATTTTCTTTAGGCAAATGTGTACGGATACCATTGCTCCTTGGAGCTATAGTGCAGCATGTTAGCTGCGGAGTTCACTGGAAAGATTTTTTTTTTTTTTGTGGAAGTGATTATTTAGATTCCTCGGTATATGGATCAGTCCCAGAATCCTATTTTCAGTTTTTTTTGGACTAAACTAACATTATAGATTGTCTTCATTTCCACAATAGATCTGAGAATTCGTTTTTTTTAACAAAAATCTAAGAAG]
[+] EMBL CF304642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAAAATGAGGCTACCTGATAGCAGCAATGTCGACAGTCTTAGGGAATTCATAAAAGCTGTTTATGTGGAGAGAAGGTATGCTGGTGGAAGGTTTTCTGAAAGGCCTCCAAGAGATAAACAGAATCAAAAGAACAATGAACAAGAGCATAGAAGGGCTAGTTCGTACCATTCATTTTCTCAGAGCCCACCTTATGATTACCAATACGAAGAAAGACGCAATGGCAAGCAATCCGTGATGCTAACTAGGAAACCTGGTTCAGATAGGGGGCATGATGGGAAGATGTCTGGATTTGCTTACAGTCCACAGAGCCTGCATGAGAGGATGTCAGAAGACCGATTTGCCAATGAGAATTCTGGACCAAGAATTTCTGACTGCTCAGGGTCAAGCATCAGTAATACATTTAGAACGACACCACACTCACCGAATTTCCTTGATAAAGGGTGTTCCAGCCCCTCTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF326126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAATCCCCAACTCTGCACTCAGGAACATAACATTGAGCGCTGTATCAACTGGAAATCCTTTTGCATAGAAAATGGCCTCAGCCTTCAGTTTACAAACTAGAAAAGCTAAAGGCTCGGTAAAATCCTTTTCCAAAAAGCAGCTCACCAGTCACCACCAAATTACCAATTGGTGTGTGATTCCGTCCTTTGGTTAGTGAAACTATGCATATGTACAAACAAGGAGGAACATCGTGAAGGGGACTGTGCGGAGAAATTTTGCACACATATGGTACAAACCAAGGAGGAACATCATGAAGGGGACTATACGGATAGGATAGGATGCGACTCGTTGGTTGTGGCAAATGACAAGCTCGGATGTGGGAAATGGTAGACTTTCTCACAAATCTTATCAACAACTGAAAATCAGTTTTAGTGTATTTTCTTTAGGCAAATGTGTACGGATACCATTGCTCCTTGGAGCTATAGTGCAGCATGTTAGCTGCGGAGTTCACTGGAAAaaaaaaaaa                                                                                                                                                          ]


>consensus_4581#0 TTTCCACACCCGTTATTCCCAACCGCATCGCGTCGCGTCGCCGGCTCAAGCAAACGCACC GGCGCCTCTCGCCGTCGCCGTCGCCGCCATCTACCAGCGCCTTCTTCTCCGGCGCATCCG TTTCACGCCCTCTCACTTCCTCGCCGGTTTCCACGGAGGAGGGAGCGATCCAATCCTCCG AGGAGGCGGCGGCGGCTGCGGGATCGCGGGATTCGTCGTTCGATCTGTGTGGCTGCGGGT GCGGGGGGGTGTGGTCGATGGCGGCGGCGGCGTCCAGGAAGGAGGAGGAGAGGAACGAGC GGGTCGTGAGGGGGCTCCTCAAGCTGCCGCCCAACCGCAGATGCATCAACTGCAACGGCC TCGGGCCGCAGTACGTGTGCACGAGCTTCTGGACATTCGTCTGCATCTCCTGCAGCGGCA TCCACCGTGAGTTCACGCACCGTGTGAAGTCAGTATCTATGTCGACGTTCACCACGCAAG AGGTCGAGGCCCTCCAGAACGGTGGGAATCAAAGAGCCAGAGAATCGTTCTTAAAGGAAT TTGATGCTCAGAAAATGAGGCTACCTGATAGCAGCAATGTCGACAGTCTTAGGGAATTCA TAAAAGCTGTTTATGTGGAGAGAAGGTATGCTGGTGGAAGGTTTTCTGAAAGGCCTCCAA GAGATAAACAGAATCAAAAGAACAATGAACAAGAGCATAGAAGGGCTAGTTCGTACCATT CATTTTCTCAGAGCCCACCTTATGATTACCAATACGAAGAAAGACGCAATGGCAAGCAAT CCGTGATGCTAACTAGGAAACCTGGTTCAGATAGGGGGCATGATGGGAAGATGTCTGGAT TTGCTTACAGTCCACAGAGCCTGCATGAGAGGATGTCAGAAGACCGATTTGCCAATGAGA ATTCTGGACCAAGAATTTCTGACTGCTCAGGGTCAAGCATCAGTAATACATTTAGAACGA CACCACACTCACCGAATTTCCTTGATAAAGGGTGTTCCAGCCCCTCTATGCAACAAAATC AATCAAACATACAGGCTTCTAGTGGAATCACTCAATCTGAGAGAACTATATCAACAGGAA ACATAGATTCGTCATCTACAAAATCAAGCAAATCAAGCTTAGCTGATATGTTTTTTGAAT CTGATATTGCTCATAGAACTCAGCAAACGAAGGATTGCATTACTCCAAGTTTCACAGCTT TCTCTGATGTTGCCAACATTGCACAGAAAGATCTCCTTAATGAGCCTGTTGCGCAGCAAC AACCTGTAACTGGTTTGGATCAACCAGTAGATTTTTTTGCTAGCATGCCTCCGGCAACTC CATCCACTGATAGAATGCTCACAGCAGCTCCATCAATGGACAATGCTGGGTGGGCTACAT TTGACACACCACCAGAAGAAAAGCAACCTGGAGTGATTGGGCTTTCTGGCATTTCCGTAA TGGATAAACATGCTTTGAGTGGTGATTTGTTTTCGTTTGAACCAAATAATGATCAACCAA CGTGGCTCCAGAGCTCAAAGACATCAAAAAATAATGCTTCTGTGACTGATCAGTCTGATG TACCTTGTAAATATACATCCTCTGATGCAAGTAATTCTCAGGCTTGGAGTGCTTTTGAGG CCAAAAGTGTTAGCACCCAACAAGCCTCGCCAGATCTTTCACTAATGAGTTCTATAGAAC CTAAAGAACCAATTGATGAAAATAAATTGCAGCTCTGGCATTCATTCGATGATGCAAGTG AGACTATGACTCTCAATCTGTCCAATGCTCAGCTGCAAACTAATGAGCACAAGAATGTTG ATAACAATTCCCTAACAACAAGCAATCCATTTACTTGCTCCATAACGTCAAAGGTACCCC TTTGCTCCATAACAACCTAATATATTTTTCCGTCATGTAGGAATCTCGTGGTAATGATTC CCAAGAAATTTTCATGGGTGGATTAGCTCCTAGCGAACCCTTTGCTCCATTCCCTGAGCC ATCACTGTTTGCTACTACTTCCGTGGGAGAAGCCTCTGTACAGCAGATGCCGTTGAATCC ATTTGATCTTCCATTTGATGCTGACTCGGATTCTCCAGATATGTTTATGGATGTGACAGC GTTGCAAGCGGTTTTGCCTAATGCTGACCTATCAACTTCTTTCGTTGATGGTTTGCCGGA AACATGGTTCTCCAACAATGCGTCCGCTTATGTTCCACCGGGGTCACATGGTGGACCTCC ATGCCTTGTCGAGCAAATCCCCAACTCTGCACTCAGGAACATAACATTGAGCGCTGTATC AACTGGAAATCCTTTTGCATAGAAAATGGCCTCAGCCTTCAGTTTACAAACTAGAAAAGC TAAAGGCTCGGTAAAATCCTTTTCCAAAAAGCAGCTCACCAGTCACCACCAAATTACAAA TTGGTGTGTGATTCCGTCCTTTGGTTAGTGAAACTATGCATATGTACAAACAAGGAGGAA CATCGTGAAGGGGACTGTGCGGAGAAATTTTGCACACATATGGTACAAACCAAGGAGGAA CATCATGAAGGGGACTATACGGATAGGATAGGATGCGACTCGTTGGTTGTGGCAAATGAC AAGCTCGGATGTGGGAAATGGTAGACTTTCTCACAAATCTTATCAACAACTGAAAATCAG TTTTAGTGTATTTTCTTTAGGCAAATGTGTACGGATACCATTGCTCCTTGGAGCTATAGT GCAGCATGTTAGCTGCGGAGTTCACTGGAAAGATTTTTTTTTTTTTTGTGGAAGTGATTA TTTAGATTCCTCGGTATATGGATCAGTCCCAGAATCCTATTTTCAGTTTTTTTTGGACTA AACTAACATTATAGATTGTCTTCATTTCCACAATAGATCTGAGAATTCGTTTTTTTTAAC AAAAATCTAAGAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)