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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4604 cluster # 4604       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4604#0 length = 470 sequences # 3  

consensusID : consensus_4604#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 470
fasta sequence
                              [AAGCCAAAAAAANNCGTTCTGTTNACAAGTTCNCNAAANTCATTTTCAAAAAAAAAANTTCCCTTNTCCANACAAAACAAACTAGCAAACATGCATGACAAGACCTGCCCCAAGTGCGGAGCTGCTTCCGATGGCAGCTCCAAGACGTGCGGCTCGTGCGGAGCTAGCTGTCCCGTCTAAGATCTGTTCGAGCATCTACGATCATCACCACCTTCGGTTTAATCCAATTTTCTCGTGACACTCTGTTTTCACAAGTAAACGGAGGGTAACGTCAGAATACGGATCTCAGACTTTCGGTGTGGCAATTTGGGGGGCTTTTCTTTTGGGGGGCGTTTGGGATGGTGCCAATTCTTTCTTTGGGAATCGGGGCAGTACATGAGATGAGAGACTACATGACTGCGATAGGGCTTTTGTAGTTGTAACGAAAGGGACGAAGTGAAGACGACAAGAAAATACCATGAGAAAAAAAA]

[+] EMBL AT003636             [AAGCCAAAAAAANNCGTTCTGTTNACAAGTTCNCNAAANTCATTTTCAAAAAAAAAANTTCCCTTNTCCANACAAAACAAACTAGCAAACATGCATGACAAGACCTGCCCCAAGTGCGGAGCTGCTTCCGATGGCAGCTCCAAGACGTGCGGCTCGTGCGGAGCTAGCTGTCCCGTCTAAGATCTGTTCGAGCATCTACGATCATCACCACCTTCGGTTTAATCCAATTTTCTCGTGACACTCTGTTTTCACAAGTAAACGGAGGGTAACGTCAGAATACGGATCTCAGACTTTCGGTGTGGCAATTTGGGGGGCTTTTCTTTTGGGGGGCGTTTGGGATGGTGCCAATTCTTTCTTTGGGAATCGGGGCAGTACATGAGATGAGAGACTACATGACTGCGATAGGGCTTTTGTAGTTGTAACGAAAGGGACGAAGTGAAGACGACAAGAAAATACCATGAGAAAAAAAA]
[+] EMBL AT003635             [                                                                                                 ACAAGACCTGCCCCAAGTGCGGAGCTGCTTCCGATGGCAGCTCCAAGACGTGCGGCTCGTGCGGAGCTAGCTGTCCCGTCTAAGATCTGTTCGAGCATCTACGATCATCACCACCTTCGGTTTAATCCAATTTTCTCGTGACACTCTGTTTTCACAAGTAAACGGAGGGTAACGTCAGAATACGGATCTCAGACTTTCGGTGTGGCAATTTGGGGGGCTTTTCTTTTGGGGGGCGTTTGGGATGGTGCCAATTCTTTCTTTGGGAATCGGGGCAGTACATGAGATGAGAGACTACATGACTGCGATAGGGCTTTTGTAGTTGTAACGAAAGGGACGAAGTGAAGACGACAAGAAAATACCATGAGAAAAAAAA]
[+] EMBL AT003744             [                                                                                                                                                                                                     ACGGTCATCACCACCTTCGGTTTAATCCNATTTTCTCGTGACACTCTGTTTTCACAAGTAAACGGAGGGTAACGTCAGAATACGGATCTCAGACTTTCGGTGTGGCAATTTGGGGGGCTTTTCTTTTGGGGGGCGTTTGGGATGGTGCCAATTCTTTCTTTGGGAATCGGGGCAGTACATGAGATGAGAGACTACATGACTGCGATAGGGCTTTTGTAGTTGTAACGAAAGGGACGAAGTGAAGACGACAAGAAAATACCATGAGAAAAAAAA]


>consensus_4604#0 AAGCCAAAAAAANNCGTTCTGTTNACAAGTTCNCNAAANTCATTTTCAAAAAAAAAANTT CCCTTNTCCANACAAAACAAACTAGCAAACATGCATGACAAGACCTGCCCCAAGTGCGGA GCTGCTTCCGATGGCAGCTCCAAGACGTGCGGCTCGTGCGGAGCTAGCTGTCCCGTCTAA GATCTGTTCGAGCATCTACGATCATCACCACCTTCGGTTTAATCCAATTTTCTCGTGACA CTCTGTTTTCACAAGTAAACGGAGGGTAACGTCAGAATACGGATCTCAGACTTTCGGTGT GGCAATTTGGGGGGCTTTTCTTTTGGGGGGCGTTTGGGATGGTGCCAATTCTTTCTTTGG GAATCGGGGCAGTACATGAGATGAGAGACTACATGACTGCGATAGGGCTTTTGTAGTTGT AACGAAAGGGACGAAGTGAAGACGACAAGAAAATACCATGAGAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)