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Oryza sativa
cluster # 468 cluster # 468       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_468#0 length = 985 sequences # 2  

consensusID : consensus_468#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 985
fasta sequence
                              [CAGGCGCCCTCCATCTCCGTCCCTCCCCCCATGTCGGCGTTGTTCCCCGTACCCCCCAGTCGGCAGCGCCCTCCCCCGAGCTGACGACGCCGTTCCCTCGAGCCGGCGACTCAGCCGTGGCGCTTCCTCTCTCCCTATCCCTCTACGTGCGACCCCATGCCAAGGCAGTGGTCCGCGACGAGCCGGGGAGCTATGGCCGAGAGCAGCGACGGGCGGCGACGCCTCTCCGCCCCTCGCCTCCTCTCCCCTGCCATGGGGCTGCGGGAGGGCTCGACCGTGGCGGGCGGTGGCAGCAGGCGACGGCGCCCTCCCGGCAGGAGGGGAGGGGGCGAACAAGGGCGGTGCCCTTCCCTCCGCCGGATCCAGCGGGAGGGGAGGCGGCGGCAGCCCGTCGGCGTCCCAGCGGCGGTGGCGCCCTCCCCTCCGTTGGATCCAGCGGGAGGGGAGCCGGCGGCGGCCCGGCGTACCTGCGACGGCGGCACCCTCCCCTTCGATCTAGCTGTATGGGAATTTTTGGATAAAATTTGTGTGTATATGCTTCAGTTTTTCTTGTCTCTGATTCTATTTGTCTGATTCCGAGTGGGATTTAGGGAGGGGGGATTTGTGTAATGTGAGATTTGGGGAGGGGGGGGGGGACGGGGACGGGCGATTGAATCGGACATGTGAGATTTTGGGAGGGGGGGGGACGGGGACGGGCGATTGAATCGGACTTTCTTTTTTTTGGCTCGCGATTGGGATTCGAGGGCGGGGGCTGCTGGTGCGCACCGCCGACGGACGAAGGCGGTCCTGTGACGATTGTGATGATGTGGGATTTGAAGAGGAGGTGTGCTCAATGTGGGATTCTATTTGTGTGATATGGAATTCCGACTGGGATTTTAGGGGGGGAAGGGGGTGTCGGACGAAAAATCACCGCAAGGATATGTATGTATGAAGATATTAGCAGAGTTCTCTCTTTTATAAATCATCCCTTGGATTGAATAAATAC]

[+] EMBL AK072190             [CAGGCGCCCTCCATCTCCGTCCCTCCCCCCATGTCGGCGTTGTTCCCCGTACCCCCCAGTCGGCAGCGCCCTCCCCCGAGCTGACGACGCCGTTCCCTCGAGCCGGCGACTCAGCCGTGGCGCTTCCTCTCTCCCTATCCCTCTACGTGCGACCCCATGCCAAGGCAGTGGTCCGCGACGAGCCGGGGAGCTATGGCCGAGAGCAGCGACGGGCGGCGACGCCTCTCCGCCCCTCGCCTCCTCTCCCCTGCCATGGGGCTGCGGGAGGGCTCGACCGTGGCGGGCGGTGGCAGCAGGCGACGGCGCCCTCCCGGCAGGAGGGGAGGGGGCGAACAAGGGCGGTGCCCTTCCCTCCGCCGGATCCAGCGGGAGGGGAGGCGGCGGCAGCCCGTCGGCGTCCCAGCGGCGGTGGCGCCCTCCCCTCCGTTGGATCCAGCGGGAGGGGAGCCGGCGGCGGCCCGGCGTACCTGCGACGGCGGCACCCTCCCCTTCGATCTAGCTGTATGGGAATTTTTGGATAAAATTTGTGTGTATATGCTTCAGTTTTTCTTGTCTCTGATTCTATTTGTCTGATTCCGAGTGGGATTTAGGGAGGGGGGATTTGTGTAATGTGAGATTTGGGGAGGGGGGGGGGGACGGGGACGGGCGATTGAATCGGACATGTGAGATTTTGGGAGGGGGGGGGACGGGGACGGGCGATTGAATCGGACTTTCTTTTTTTTGGCTCGCGATTGGGATTCGAGGGCGGGGGCTGCTGGTGCGCACCGCCGACGGACGAAGGCGGTCCTGTGACGATTGTGATGATGTGGGATTTGAAGAGGAGGTGTGCTCAATGTGGGATTCTATTTGTGTGATATGGAATTCCGACTGGGATTTTAGGGGGGGAAGGGGGTGTCGGACGAAAAATCACCGCAAGGATATGTATGTATGAAGATATTAGCAGAGTTCTCTCTTTTATAAATCATCCCTTGGATTGAATAAATAC]
[+] EMBL AU070859             [                                                                                                                                                                                                                                                                                                                                                  GCGGTGCCCTTCCCTCCGCCGGATCCAGCGGGAGGGGAGGCGGCGGCAGCCCGTCGGNGTCCCAGCGGCGGTGGCGCCCTCCCCTCCGTTGGATCCAGCGGGNGGGGAGCCGGCGGCGGCCCGGCGTACCTGCGACGGCGGCACCCTCCCCTTCGATCTAGCTGTATGGGAATTTTTGGATAAAATTTGTGTGTATATGCTTCNGTTTTTCTaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_468#0 CAGGCGCCCTCCATCTCCGTCCCTCCCCCCATGTCGGCGTTGTTCCCCGTACCCCCCAGT CGGCAGCGCCCTCCCCCGAGCTGACGACGCCGTTCCCTCGAGCCGGCGACTCAGCCGTGG CGCTTCCTCTCTCCCTATCCCTCTACGTGCGACCCCATGCCAAGGCAGTGGTCCGCGACG AGCCGGGGAGCTATGGCCGAGAGCAGCGACGGGCGGCGACGCCTCTCCGCCCCTCGCCTC CTCTCCCCTGCCATGGGGCTGCGGGAGGGCTCGACCGTGGCGGGCGGTGGCAGCAGGCGA CGGCGCCCTCCCGGCAGGAGGGGAGGGGGCGAACAAGGGCGGTGCCCTTCCCTCCGCCGG ATCCAGCGGGAGGGGAGGCGGCGGCAGCCCGTCGGCGTCCCAGCGGCGGTGGCGCCCTCC CCTCCGTTGGATCCAGCGGGAGGGGAGCCGGCGGCGGCCCGGCGTACCTGCGACGGCGGC ACCCTCCCCTTCGATCTAGCTGTATGGGAATTTTTGGATAAAATTTGTGTGTATATGCTT CAGTTTTTCTTGTCTCTGATTCTATTTGTCTGATTCCGAGTGGGATTTAGGGAGGGGGGA TTTGTGTAATGTGAGATTTGGGGAGGGGGGGGGGGACGGGGACGGGCGATTGAATCGGAC ATGTGAGATTTTGGGAGGGGGGGGGACGGGGACGGGCGATTGAATCGGACTTTCTTTTTT TTGGCTCGCGATTGGGATTCGAGGGCGGGGGCTGCTGGTGCGCACCGCCGACGGACGAAG GCGGTCCTGTGACGATTGTGATGATGTGGGATTTGAAGAGGAGGTGTGCTCAATGTGGGA TTCTATTTGTGTGATATGGAATTCCGACTGGGATTTTAGGGGGGGAAGGGGGTGTCGGAC GAAAAATCACCGCAAGGATATGTATGTATGAAGATATTAGCAGAGTTCTCTCTTTTATAA ATCATCCCTTGGATTGAATAAATAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)