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Oryza sativa
cluster # 4685 cluster # 4685       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4685#0 length = 2312 sequences # 3  

consensusID : consensus_4685#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2312
fasta sequence
                              [CCACCGCAGCCATCCAACGAAAAACCCTAAAAACCCCTCTCTCTCCCCTTCGCTTCCATCCATGGCGGACCACCCTTCGTCTTCCCCTACGGCGGCCACGTCTCCGCCGCCGCGCAAGAGGCCGCGGGACGCCTCGCCGTCGGAGGAGGAGGAGGGCGGCCTCCCCGGCGGGCCGCCGTCGCCGTCGCCGTCGCCGGCGGGGTACATCTTCATGTGCAGCGGGGCGACGAAGCCGGAGTGCTACGCGCGCGGGGTGATGGGCCAGCCGCGGGGGAGGCTGCCCGCCGTCTCCCGGATCAGGCGGGGCGCCGCGCTCTTCCTCTACGACTTCGACTCCAGGCACCTCCACGGGCCCTACCGCGCCGCCTCCGACGGCGGCCTCGACCTCGCCCCCGCCGCCTTCGGTGGCCGCTTCCCCGCCCAGGTCAAATTTACAATTGATGGTGATTTCATGCCTATCCCAGAAAGTAGCCTAAGAAGTGCTATAAAAGAGAACTATTCCAATGGGAAGTTCAGCTCAGAACTTACCCTTGCACAGGTTGAAAATCTGAGAACATTGTTTCGCCCAATTATTGTGCAACCAGAACCTGGACTCCCAAATAATTTTGATGATAGGCAACCTGCTCGTCCTTGCTCCATGTCCCCTACTGCACCTTCTCTGGTGTGTGACAAACCACATTCTGCGGCAGAGAATGATGAGAATGGTTGCTCCAGTGGGTCCTCCATGTCATCGCCTGCTGGGTACATCTTCATGTGCAATGGCGTGACGAAAGCTGAGTGCTACAGGCACCGGGTGATGGGCTTGCCACTGGGGAGTCTAGACGTGGTGTCCCGGATCAGGCGTGGCACAGCGCTCTTTCTCTATGACTTCGATGCCAAGCACCTCTATGGGCCCTACCATGCCGATTCCAATGGTGGCCTCACACTCGTCCCGGATGCCTTCCGGGGCCGCTTTCCTGCCCAGGTTAAATTTACAGTTGATGGTGATTTCATGCCTATCCCAGAGAGTAGCCTAAGAACTGCTATAAAAGAGAATTATTCCAATGGGAAGTTCAGCCCAGAACTTACCCTTGTGCAGGTTGAGAAACTGAGAGCATTGTTTCGTCCAATTATTGTAATGCCAGAATCTGCACTCTTCCATAATGACAGTGACAGGCATCCTGTTCCTCCTGCTGTTTACCTACCTCCTGCTTCTCATCCATCACAGCCAGCTGCTTATGTGCATCAGCAGCACCAAACTTCTTATATTCCTCCTTTGACTGCTCATCCGATGCCACCTGAATCTTATGCACATTCATATGCTCAGATGCCTCCTCCAAACATGCAGTTCACTACACCTCCTTACCATATGTCAACAGCTGAGTATCCATATCAAGCAGCGCACACAGCATATAGTTCATTGCCCTCAGCCAACAATATCTCTATGGCCAACAATCTCTATGGCCAACAATCTCTTTCTGATCATGTTTCGGCTACTGGCTACTATACTGCCCCATATTATGCCGCCCACCAAATTGGCATGCACCCAGTTGATCCTCCAAGATCACACTACTTAGGAACTACATCTGAGAGAATTACCTACGGTACAGAGCATGAGGCGGCCACGACAAACTTGCAACCTATTAGCCATTATGGGTCCATTCCAAGTGGTGCAACCGCAGCACCTGAGGCAGCTGCGACAAACTCAGAACTAGTTTGTAATTCTGGGGCTACTCCAAGTGCTTCAGCAACTGGGGCAGCTATGACAAACTTACAACTCGTTAGGAATTATGGGTCTATGCCAAGCAGTGTGATTGGAGCTGCGGCACATTCATCTGAGGGGAGCCAATTCGAGCAGGCAGCCACTTACATCACTCATGCACCTGGAACCTACTACTGTTATGGAGCTTCCTCGGCGATCTACTCCTACCCAGGGAACACAGCATCCTGTGATGGAAACAATGTGGCTGCTGCTCCGTCAGTATATGCTGTCGCAGCACCACCAGCATACCAGTGATTACTCCATGGCCAACTGATGTTTCTGCTAACAATGTTATTCTCAGACCAAGTGCTGCTGCTTCTTCATCCTCCTGAGCTTCACATATGCCACCGGATGCACTAGCGATCCCGTATCATCGATGGTGGCCATAACCTCCCCATATAATTTTATCATGTAATTTTTGTGCATAAGGTATTAGAGTGATTCGTCTCCTACATGTAGCTTGGCTAGATTGGTGGCATCCTATGTAGCTGCATGTGTGAGCCAAGATTATATGTAAATACTCCTTGTTTATATTATAAGTTGCTTTGACTTATTTAAGTCAAAAAAAAAA]

[+] EMBL AK073354             [CCACCGCAGCCATCCAACGAAAAACCCTAAAAACCCCTCTCTCTCCCCTTCGCTTCCATCCATGGCGGACCACCCTTCGTCTTCCCCTACGGCGGCCACGTCTCCGCCGCCGCGCAAGAGGCCGCGGGACGCCTCGCCGTCGGAGGAGGAGGAGGGCGGCCTCCCCGGCGGGCCGCCGTCGCCGTCGCCGTCGCCGGCGGGGTACATCTTCATGTGCAGCGGGGCGACGAAGCCGGAGTGCTACGCGCGCGGGGTGATGGGCCAGCCGCGGGGGAGGCTGCCCGCCGTCTCCCGGATCAGGCGGGGCGCCGCGCTCTTCCTCTACGACTTCGACTCCAGGCACCTCCACGGGCCCTACCGCGCCGCCTCCGACGGCGGCCTCGACCTCGCCCCCGCCGCCTTCGGTGGCCGCTTCCCCGCCCAGGTCAAATTTACAATTGATGGTGATTTCATGCCTATCCCAGAAAGTAGCCTAAGAAGTGCTATAAAAGAGAACTATTCCAATGGGAAGTTCAGCTCAGAACTTACCCTTGCACAGGTTGAAAATCTGAGAACATTGTTTCGCCCAATTATTGTGCAACCAGAACCTGGACTCCCAAATAATTTTGATGATAGGCAACCTGCTCGTCCTTGCTCCATGTCCCCTACTGCACCTTCTCTGGTGTGTGACAAACCACATTCTGCGGCAGAGAATGATGAGAATGGTTGCTCCAGTGGGTCCTCCATGTCATCGCCTGCTGGGTACATCTTCATGTGCAATGGCGTGACGAAAGCTGAGTGCTACAGGCACCGGGTGATGGGCTTGCCACTGGGGAGTCTAGACGTGGTGTCCCGGATCAGGCGTGGCACAGCGCTCTTTCTCTATGACTTCGATGCCAAGCACCTCTATGGGCCCTACCATGCCGATTCCAATGGTGGCCTCACACTCGTCCCGGATGCCTTCCGGGGCCGCTTTCCTGCCCAGGTTAAATTTACAGTTGATGGTGATTTCATGCCTATCCCAGAGAGTAGCCTAAGAACTGCTATAAAAGAGAATTATTCCAATGGGAAGTTCAGCCCAGAACTTACCCTTGTGCAGGTTGAGAAACTGAGAGCATTGTTTCGTCCAATTATTGTAATGCCAGAATCTGCACTCTTCCATAATGACAGTGACAGGCATCCTGTTCCTCCTGCTGTTTACCTACCTCCTGCTTCTCATCCATCACAGCCAGCTGCTTATGTGCATCAGCAGCACCAAACTTCTTATATTCCTCCTTTGACTGCTCATCCGATGCCACCTGAATCTTATGCACATTCATATGCTCAGATGCCTCCTCCAAACATGCAGTTCACTACACCTCCTTACCATATGTCAACAGCTGAGTATCCATATCAAGCAGCGCACACAGCATATAGTTCATTGCCCTCAGCCAACAATATCTCTATGGCCAACAATCTCTATGGCCAACAATCTCTTTCTGATCATGTTTCGGCTACTGGCTACTATACTGCCCCATATTATGCCGCCCACCAAATTGGCATGCACCCAGTTGATCCTCCAAGATCACACTACTTAGGAACTACATCTGAGAGAATTACCTACGGTACAGAGCATGAGGCGGCCACGACAAACTTGCAACCTATTAGCCATTATGGGTCCATTCCAAGTGGTGCAACCGCAGCACCTGAGGCAGCTGCGACAAACTCAGAACTAGTTTGTAATTCTGGGGCTACTCCAAGTGCTTCAGCAACTGGGGCAGCTATGACAAACTTACAACTCGTTAGGAATTATGGGTCTATGCCAAGCAGTGTGATTGGAGCTGCGGCACATTCATCTGAGGGGAGCCAATTCGAGCAGGCAGCCACTTACATCACTCATGCACCTGGAACCTACTACTGTTATGGAGCTTCCTCGGCGATCTACTCCTACCCAGGGAACACAGCATCCTGTGATGGAAACAATGTGGCTGCTGCTCCGTCAGTATATGCTGTCGCAGCACCACCAGCATACCAGTGATTACTCCATGGCCAACTGATGTTTCTGCTAACAATGTTATTCTCAGACCAAGTGCTGCTGCTTCTTCATCCTCCTGAGCTTCACATATGCCACCGGATGCACTAGCGATCCCGTATCATCGATGGTGGCCATAACCTCCCCATATAATTTTATCATGTAATTTTTGTGCATAAGGTATTAGAGTGATTCGTCTCCTACATGTAGCTTGGCTAGATTGGTGGCATCCTATGTAGCTGCATGTGTGAGCCAAGATTATATGTAAATACTCCTTGTTTATATTATAAGTTGCTTTGACTTATTTAAGTCAAAct     ]
[+] EMBL CF328180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTGATGTTTCTGCTAACAATGTTATTCTCAGACCAAGTGCTGCTGCTTCTTCATCCTCCTGAGCTTCACATATGCCACCGGATGCACTAGCGATCCCGTATCATCGATGGTGGCCATAACCTCCCCATATAATTTTATCATGTAATTTTTGTGCATAAGGTATTAGAGTGATTCGTCTCCTACATGTAGCTTGGCTAGATTGGTGGCATCCTATGTAGCTGCATGTGTGAGCCAAGATTATATGTAAATACTCCTTGTTTATATTATAAGTTGCTTTGACTTATTTAAGTCANAAAAAAAA]
[-] EMBL CF328179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGATGTTTCTGCTAACAATGTTATTCTCAGACCAAGTGCTGCTGCTTCTTCATCCTCCTGAGCTTCACATATGCCACCGGATGCACTAGCGATCCCGTATCATCGATGGTGGCCATAACCTCCCCATATAATTTTATCATGTAATTTTTGTGCATAAGGTATTAGAGTGATTCGTCTCCTACATGTAGCTTGGCTAGATTGGTGGCATCCTATGTAGCTGCATGTGTGAGCCAAGATTATATGTAAATACTCCTTGTTTATATTATAAGTTGCTTTGACTTATTTAAGTCAAAAAAAAAA]


>consensus_4685#0 CCACCGCAGCCATCCAACGAAAAACCCTAAAAACCCCTCTCTCTCCCCTTCGCTTCCATC CATGGCGGACCACCCTTCGTCTTCCCCTACGGCGGCCACGTCTCCGCCGCCGCGCAAGAG GCCGCGGGACGCCTCGCCGTCGGAGGAGGAGGAGGGCGGCCTCCCCGGCGGGCCGCCGTC GCCGTCGCCGTCGCCGGCGGGGTACATCTTCATGTGCAGCGGGGCGACGAAGCCGGAGTG CTACGCGCGCGGGGTGATGGGCCAGCCGCGGGGGAGGCTGCCCGCCGTCTCCCGGATCAG GCGGGGCGCCGCGCTCTTCCTCTACGACTTCGACTCCAGGCACCTCCACGGGCCCTACCG CGCCGCCTCCGACGGCGGCCTCGACCTCGCCCCCGCCGCCTTCGGTGGCCGCTTCCCCGC CCAGGTCAAATTTACAATTGATGGTGATTTCATGCCTATCCCAGAAAGTAGCCTAAGAAG TGCTATAAAAGAGAACTATTCCAATGGGAAGTTCAGCTCAGAACTTACCCTTGCACAGGT TGAAAATCTGAGAACATTGTTTCGCCCAATTATTGTGCAACCAGAACCTGGACTCCCAAA TAATTTTGATGATAGGCAACCTGCTCGTCCTTGCTCCATGTCCCCTACTGCACCTTCTCT GGTGTGTGACAAACCACATTCTGCGGCAGAGAATGATGAGAATGGTTGCTCCAGTGGGTC CTCCATGTCATCGCCTGCTGGGTACATCTTCATGTGCAATGGCGTGACGAAAGCTGAGTG CTACAGGCACCGGGTGATGGGCTTGCCACTGGGGAGTCTAGACGTGGTGTCCCGGATCAG GCGTGGCACAGCGCTCTTTCTCTATGACTTCGATGCCAAGCACCTCTATGGGCCCTACCA TGCCGATTCCAATGGTGGCCTCACACTCGTCCCGGATGCCTTCCGGGGCCGCTTTCCTGC CCAGGTTAAATTTACAGTTGATGGTGATTTCATGCCTATCCCAGAGAGTAGCCTAAGAAC TGCTATAAAAGAGAATTATTCCAATGGGAAGTTCAGCCCAGAACTTACCCTTGTGCAGGT TGAGAAACTGAGAGCATTGTTTCGTCCAATTATTGTAATGCCAGAATCTGCACTCTTCCA TAATGACAGTGACAGGCATCCTGTTCCTCCTGCTGTTTACCTACCTCCTGCTTCTCATCC ATCACAGCCAGCTGCTTATGTGCATCAGCAGCACCAAACTTCTTATATTCCTCCTTTGAC TGCTCATCCGATGCCACCTGAATCTTATGCACATTCATATGCTCAGATGCCTCCTCCAAA CATGCAGTTCACTACACCTCCTTACCATATGTCAACAGCTGAGTATCCATATCAAGCAGC GCACACAGCATATAGTTCATTGCCCTCAGCCAACAATATCTCTATGGCCAACAATCTCTA TGGCCAACAATCTCTTTCTGATCATGTTTCGGCTACTGGCTACTATACTGCCCCATATTA TGCCGCCCACCAAATTGGCATGCACCCAGTTGATCCTCCAAGATCACACTACTTAGGAAC TACATCTGAGAGAATTACCTACGGTACAGAGCATGAGGCGGCCACGACAAACTTGCAACC TATTAGCCATTATGGGTCCATTCCAAGTGGTGCAACCGCAGCACCTGAGGCAGCTGCGAC AAACTCAGAACTAGTTTGTAATTCTGGGGCTACTCCAAGTGCTTCAGCAACTGGGGCAGC TATGACAAACTTACAACTCGTTAGGAATTATGGGTCTATGCCAAGCAGTGTGATTGGAGC TGCGGCACATTCATCTGAGGGGAGCCAATTCGAGCAGGCAGCCACTTACATCACTCATGC ACCTGGAACCTACTACTGTTATGGAGCTTCCTCGGCGATCTACTCCTACCCAGGGAACAC AGCATCCTGTGATGGAAACAATGTGGCTGCTGCTCCGTCAGTATATGCTGTCGCAGCACC ACCAGCATACCAGTGATTACTCCATGGCCAACTGATGTTTCTGCTAACAATGTTATTCTC AGACCAAGTGCTGCTGCTTCTTCATCCTCCTGAGCTTCACATATGCCACCGGATGCACTA GCGATCCCGTATCATCGATGGTGGCCATAACCTCCCCATATAATTTTATCATGTAATTTT TGTGCATAAGGTATTAGAGTGATTCGTCTCCTACATGTAGCTTGGCTAGATTGGTGGCAT CCTATGTAGCTGCATGTGTGAGCCAAGATTATATGTAAATACTCCTTGTTTATATTATAA GTTGCTTTGACTTATTTAAGTCAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)