cluster # 470

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Oryza sativa
cluster # 470 cluster # 470 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_470#0 length = 688 sequences # 2

consensusID : consensus_470#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence

                              [TTAAATCTTAATCCTACCACTAATCCTATGCAAAAAG-AAAAAAAAAACATGAGGAATCCAAGCCAAATGCTGCGACTGCTGCTGCTGCGGGTGGCAATCCTCGCCGCCGTTCTCGCGACACCGTCGCTGGGCCGAGTGATAGGGGGCAGCAAGTGCAAGTGCCTCATGTGCGTCTGCGACGTGGACCCGCACCCGCTCCCGCCGTCGCGCCACCACCCGCCGCCGCCGGAGGAGCCGGAGCCGGAGCCGACGCCGGTGAACCACCACTACCCTCCGCCGACGACGCCCGCGTACTCCCTCCCGCCGCCGGCGCAGCCGTACGGGCAGTACCCGTACCCGTACCCGTCGCAGGGGCAGGCCGGGGCGGCGTACTGGCCGCCGTCGACGCCGGCGGAGATGTACCCGCAGGTCAGGGGGTACATCCGGTCCGCCGCCGCTCACCGTCGGCGTCCCGGCCACGGCGGGCTCTCGTCGCGCTTGGTCGTCGTCTCCGTCTTGCTCGTGTCCGGCCTAATGCCACTGCTCGTGTAGTCGTGTGATCGTGTCTCCTGTGTTTTCGTTTAGTACGGCCGGGCCGACCGCGCCGAAGTTTCGCGGCCTGCGACTTTGCGACCGCAGCATATGTTGCGGCTGTCACGTTTACTGATTTGGCATGTAAATAAGATTACAACTGTATCGCGTCAACACG]

[+] EMBL AK105136             [TTAAATCTTAATCCTACCACTAATCCTATGCAAAAAG AAAAAAAAAACATGAGGAATCCAAGCCAAATGCTGCGACTGCTGCTGCTGCGGGTGGCAATCCTCGCCGCCGTTCTCGCGACACCGTCGCTGGGCCGAGTGATAGGGGGCAGCAAGTGCAAGTGCCTCATGTGCGTCTGCGACGTGGACCCGCACCCGCTCCCGCCGTCGCGCCACCACCCGCCGCCGCCGGAGGAGCCGGAGCCGGAGCCGACGCCGGTGAACCACCACTACCCTCCGCCGACGACGCCCGCGTACTCCCTCCCGCCGCCGGCGCAGCCGTACGGGCAGTACCCGTACCCGTACCCGTCGCAGGGGCAGGCCGGGGCGGCGTACTGGCCGCCGTCGACGCCGGCGGAGATGTACCCGCAGGTCAGGGGGTACATCCGGTCCGCCGCCGCTCACCGTCGGCGTCCCGGCCACGGCGGGCTCTCGTCGCGCTTGGTCGTCGTCTCCGTCTTGCTCGTGTCCGGCCTAATGCCACTGCTCGTGTAGTCGTGTGATCGTGTCTCCTGTGTTTTCGTTTAGTACGGCCGGGCCGACCGCGCCGAAGTTTCGCGGCCTGCGACTTTGCGACCGCAGCATATGTTGCGGCTGTCACGTTTACTGATTTGGCATGTAAATAAGATTACAACTGTATCGCGTCAACACG]
[+] EMBL OSS1349A             [               ACCACTAATCCTATGCAAAAAGAAAAAAAAAAACATGAGGAATCCAAGCCAAATGCTGCGACTGCTGCTGCTGCGGGTGGCAATCCTCGCCGCCGTTCTCGCGACACCGTCGTTNGGCCGAGTGATAGGGGGCAGCAAGTGCAAGTGCCTCATGTGCGTCTGCGACGTGGACCCGCACCCGCTCCCGCCGTCGCGCCACCACCCGCCGCCGCCGGAGGAGCCGGAGCCGGAGCCGACGCCGGTGAACCACCACTACCCTCCGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_470#0
TTAAATCTTAATCCTACCACTAATCCTATGCAAAAAGAAAAAAAAAACATGAGGAATCCA
AGCCAAATGCTGCGACTGCTGCTGCTGCGGGTGGCAATCCTCGCCGCCGTTCTCGCGACA
CCGTCGCTGGGCCGAGTGATAGGGGGCAGCAAGTGCAAGTGCCTCATGTGCGTCTGCGAC
GTGGACCCGCACCCGCTCCCGCCGTCGCGCCACCACCCGCCGCCGCCGGAGGAGCCGGAG
CCGGAGCCGACGCCGGTGAACCACCACTACCCTCCGCCGACGACGCCCGCGTACTCCCTC
CCGCCGCCGGCGCAGCCGTACGGGCAGTACCCGTACCCGTACCCGTCGCAGGGGCAGGCC
GGGGCGGCGTACTGGCCGCCGTCGACGCCGGCGGAGATGTACCCGCAGGTCAGGGGGTAC
ATCCGGTCCGCCGCCGCTCACCGTCGGCGTCCCGGCCACGGCGGGCTCTCGTCGCGCTTG
GTCGTCGTCTCCGTCTTGCTCGTGTCCGGCCTAATGCCACTGCTCGTGTAGTCGTGTGAT
CGTGTCTCCTGTGTTTTCGTTTAGTACGGCCGGGCCGACCGCGCCGAAGTTTCGCGGCCT
GCGACTTTGCGACCGCAGCATATGTTGCGGCTGTCACGTTTACTGATTTGGCATGTAAAT
AAGATTACAACTGTATCGCGTCAACACG

clustalw multiple alignements is not computed in this case