cluster # 4701

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Oryza sativa
cluster # 4701 cluster # 4701 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4701#0 length = 783 sequences # 3

consensusID : consensus_4701#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 783
fasta sequence

                              [GAGCTTTGACATAGCGGTTAGCTGCGACGAGGCGGAGTGTGTTGACATTTGCGTCCGTGGCACGTTGGGATATCTTGACCCGGAGTTTGTACGCACAAGAACTCTGAAGCCAGCGAGCGACGTCTATAATTTTGGCGTTGTGATGCTGGAAGTATTGTCAGGCAGGAGGGCAATTTGCCGCTGGAAGGAGGATCATGGCGATGGCGATGGCGATAGCCCCATGGATTCTTTGGTTAACCACGCGCTGCCACTCATCGATGCGGGGCAGGTGCTCCATCTGCTGGATAGGCGGCCGGCGGAGGAGCCAACGCCAAGGCAGCTCGAGGCGGCGGACCTGGTGGCACGCACGGCAGCGCACTGCCTGCAAGAGAATGGGGACGACCGGCCGGCCATGTCGGACGTCATGACCAGACTCCAGGCGGCGCTGGAGCTCGTCCGTTGCGATGATGAGTAGCATGGTCTGGGCATCTTCACGGATGCATGATTTATAGATCATAATACTGCTGTAGTGCTGTTACACCTTCCCGAGATGTAGAGGCCGGGTTAATACAATCTGTTATCTAAAAAAATTTGGCATCCTAGCTCCCTGGTGAAGGATATGATATGATATAGACAAATTAATGTATGGGATTAATACATGATGAGATTGTAAACAAGTTTCACTGCGGTCTTTGTGTAGTGAGGCTATCCAAAATTTTCTTTCCACTGGAATTGCTAGTTAGAATCATACTTCTAGTCCGATTTTATAGTTCTTTTTCAGACATGTCCAAAACAGGCATTGTT]

[-] EMBL CB638752             [GAGCTTTGACATAGCGGTTAGCTGCGACGAGGCGGAGTGTGTTGACATTTGCGTCCGTGGCACGTTGGGATATCTTGACCCGGAGTTTGTACGCACAAGAACTCTGAAGCCAGCGAGCGACGTCTATAATTTTGGCGTTGTGATGCTGGAAGTATTGTCAGGCAGGAGGGCAATTTGCCGCTGGAAGGAGGATCATGGCGATGGCGATGGCGATAGCCCCATGGATTCTTTGGTTAACCACGCGCTGCCACTCATCGATGCGGGGCAGGTGCTCCATCTGCTGGATAGGCGGCCGGCGGAGGAGCCAACGCCAAGGCAGCTCGAGGCGGCGGACCTGGTGGCACGCACGGCAGCGCACTGCTTGCAAGAGAATGGGGACGACCGGCCGGCCATGTCGGACGTCATGACCAGACTCCAGGCGGCGCTGGAGCTCGTCCGTTGCGATGATGAGTAGCATGGTCTGGGCATCTTCACGGATGCATGATTTATAGATCATAATACTGCTGTAGTGCTGTTACACCTTCCCGAGATGTAGAGGCCGGGTTAATACAATCTGTTATCTAAAAAAATTTGGCATCCTAGCTCCCTGGTGAAGGATATGATATGATATAGACAAATTAATGTATGGGATTAATACATGATGAG                                                                                                                                          ]
[-] EMBL CB638740             [ AGCTTTGACATAGCGGTTAGCTGCGACGAGGCGGAGTGTGTTGACATTTGCGTCCGTGGCACGTTGGGATATCTTGACCCGGAGTTTGTACGCACAAGAACTCTGAAGCCAGCGAGCGACGTCTATAATTTTGGCGTTGTGATGCTGGAAGTATTGTCAGGCAGGAGGGCAATTTGCCGCTGGAAGGAGGATCATGGCGATGGCGATGGCGATAGCCCCATGGATTCTTTGGTTAACCACGCGCTGCCACTCATCGATGCGGGGCAGGTGCTCCATCTGCTGGATAGGCGGCCGGCGGAGGAGCCAACGCCAAGGCAGCTCGAGGCGGCGGACCTGGTGGCACGCACGGCAGCGCACTGCCTGCAAGAGAATGGGGACGACCGGCCGGCCATGTCGGACGTCATGACCAGACTCCAGGCGGCGCTGGAGCTCGTCCGTTGCGATGATGAGTAGCATGGTCTGGGCATCTTCACGGATGCATGATTTATAGATCATAATACTGCTGTAGTGCTGTTACACCTTCCCGAGATGTAGAGGCCGGGTTAATACAATCTGTTATCTAAAAAAATTTGGCATCCTAGCTCCCTGGTGAAGGATATGATATGATATAGACAAATTAATGTATGGGATTAATACATGATGAG                                                                                                                                          ]
[+] EMBL AK105217             [                                                                           TGACCCGGAGTTTGTACGCACAAGAACTCTGAAGCCAGCGAGCGACGTCTATAATTTTGGCGTTGTGATGCTGGAAGTATTGTCAGGCAGGAGGGCAATTTGCCGCTGGAAGGAGGATCATGGCGATGGCGATGGCGATAGCCCCATGGATTCTTTGGTTAACCACGCGCTGCCACTCATCGATGCGGGGCAGGTGCTCCATCTGCTGGATAGGCGGCCGGCGGAGGAGCCAACGCCAAGGCAGCTCGAGGCGGCGGACCTGGTGGCACGCACGGCAGCGCACTGCCTGCAAGAGAATGGGGACGACCGGCCGGCCATGTCGGACGTCGTGACCAGACTCCAGGCGGCGCTGGAGCTCGTCCGTTGCGATGATGAGTAGCATGGTCTGGGCATCTTCACGGATGCATGATTTATAGATCATAATACTGCTGTAGTGCTGTTACACCTTCCCGAGATGTAGAGGCCGGGTTAATACAATCTGTTATCTAAAAAAATTTGGCATCCTAGCTCCCTGGTGAAGGATATGATATGATATAGACAAATTAATGTATGGGATTAATACATGATGAGATTGTAAACAAGTTTCACTGCGGTCTTTGTGTAGTGAGGCTATCCAAAATTTTCTTTCCACTGGAATTGCTAGTTAGAATCATACTTCTAGTCCGATTTTATAGTTCTTTTTCAGACATGTCCAAAACAGGCATTGTT]




>consensus_4701#0
GAGCTTTGACATAGCGGTTAGCTGCGACGAGGCGGAGTGTGTTGACATTTGCGTCCGTGG
CACGTTGGGATATCTTGACCCGGAGTTTGTACGCACAAGAACTCTGAAGCCAGCGAGCGA
CGTCTATAATTTTGGCGTTGTGATGCTGGAAGTATTGTCAGGCAGGAGGGCAATTTGCCG
CTGGAAGGAGGATCATGGCGATGGCGATGGCGATAGCCCCATGGATTCTTTGGTTAACCA
CGCGCTGCCACTCATCGATGCGGGGCAGGTGCTCCATCTGCTGGATAGGCGGCCGGCGGA
GGAGCCAACGCCAAGGCAGCTCGAGGCGGCGGACCTGGTGGCACGCACGGCAGCGCACTG
CCTGCAAGAGAATGGGGACGACCGGCCGGCCATGTCGGACGTCATGACCAGACTCCAGGC
GGCGCTGGAGCTCGTCCGTTGCGATGATGAGTAGCATGGTCTGGGCATCTTCACGGATGC
ATGATTTATAGATCATAATACTGCTGTAGTGCTGTTACACCTTCCCGAGATGTAGAGGCC
GGGTTAATACAATCTGTTATCTAAAAAAATTTGGCATCCTAGCTCCCTGGTGAAGGATAT
GATATGATATAGACAAATTAATGTATGGGATTAATACATGATGAGATTGTAAACAAGTTT
CACTGCGGTCTTTGTGTAGTGAGGCTATCCAAAATTTTCTTTCCACTGGAATTGCTAGTT
AGAATCATACTTCTAGTCCGATTTTATAGTTCTTTTTCAGACATGTCCAAAACAGGCATT
GTT

clustalw multiple alignements is not computed in this case