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Oryza sativa
cluster # 4752 cluster # 4752       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4752#0 length = 1179 sequences # 3  

consensusID : consensus_4752#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1179
fasta sequence
                              [GTACAATTGATGAAACACTTCTTCAGCTGAAATTCGATCCAAAAGAGTTTGCTAGATGCAATAAGTTGATGGAGACATACAATGTGTTAGGTCAAGAATGGACATTCACTAAGCTGAAGGAACAGACCAAATATCTCTTTGATTCATTGATTGTGCTGGTTGAGTCGTTTCACGAGGCAGGCTATTGTTTCTCTCAGATATCCACAAGCACCGTTCTGGTAACATCATCTTGGAAATTTGTTCTGCTAGAGGGGTGTTTTGCTCTTAATAACTGGAGTGTTGAAGGGGTTAGAAAGGACTACAGAGATATTGCTGTTTTGTTCAGGAAGCTCCTATCCGAGTCCATGGGTGAAGAGACAGTTCATCCCCCTGATTTTGGGATGCTACTCAGCTTGATGGAAAAGGATGGCTTTCGGTACAAGTACTTGATTGGTACTCACGTATCATTGTTACCTGATGATAACATTAACATTGCTTATATGAAGATTCATGAGTTCATTCGGAAAATTTTGCTGGCTGAAGAGAAGGATAAAGCCAGGCAACTGAAACTCGGTATAACACGTTACAGTACAATTAGCACAAGAATAAGAAGACGCATTCCTTACAAGAATATCTGGTTGACCAAGGCTCGAAGCAATTCATTCATGACAGCATTCTTGGAGCAAAACGAAAGAAATATGGAGTTAGGAGGGACATATTTTGAACTGCTTGACACTATTAGACATTTCGTATGTCACAGGCTGGACTTGCTGAAGCTCGGTTTCAGATATAAGGCAAACGAGGTAGACCGCATGTGGTATGCAGAGTTTCCTACACTTTTAGCTGAGTTGCAGTTAGCTCTGTTCCTGGTTGGTCGACTTGAAGAACTGGAATTGGAGAAGAACTTTATGAACAGAAAACCAATGCGACCCAAAGTGTCAAGCCATGGTACTTTCTAACTTTCTATTCATTTCACTTCCTCCTCACCCCCCCCCAACGCCTTCTTTTTTTTTTGTACAATATGCTTGCCTGGTAATTTTGGATGCTTGTTCCTGGATATGTTAGTGAAGTTGATAGCTCAAGCCCTTTGAGTTCCAGGTCTTAGTACGTTCTACTGTATGTTCCCTGTTCAAGATGAAATGTATGTTGCACTTTATTTGCCCTGAGTTGCAGTCCTGTTAACATGAGGATGCCAAATGG]

[+] EMBL CA765168             [GTACAATTGATGAAACACTTCTTCAGCTGAAATTCGATCCAAAAGAGTTTGCTAGATGCAATAAGTTGATGGAGACATACAATGTGTTAGGTCAAGAATGGACATTCACTAAGCTGAAGGAACAGACCAAATATCTCTTTGATTCATTGATTGTGCTGGTTGAGTCGTTTCACGAGGCAGGCTATTGTTTCTCTCAGATATCCACAAGCACCGTTCTGGTAACATCATCTTGGAAATTTGTTCTGCTAGAGGGGTGTTTTGCTCTTAATAACTGGAGTGTTGAAGGGGTTAGAAAGGACTACAGAGATATTGCTGTTTTGTTCAGGAAGCTCCTATCCGAGTCCATGGGTGAAGAGACAGTTCATCCCCCTGATTTTGGGATGCTACTCAGCTTGATGGAAAAGGATGGCTTTCGGTACAAGTACTTGATTGGTACTCACGTATCATTGTTACCTGATGATAACATTAACATTGCTTATATGAAGATTCATGAGTTCATTCGGAAAATTTTGCTGGCTGAAGAGAAGGATAAAGCCAGGCAACTGAAACTCGGTATAACACGTTACAGTACAATTAGCACAAGAATAAGAAGACGCATTCCTTACAAGAATATCTGGTTGACCAAGGCTCGAAGCAATTCATTCATGACAGCATTCTTGGAGCAAAACGAAAGAAATATGGAGTTAGGAGGGACATATTTTGAACTGCTTGACACTATTAGACATTTCTTATGTCACAGGCTGGACTTGCTGAAGCTCGGTTTCAGATATAA                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB638965             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATAACACGTTACAGTACAATTAGCACAAGAATAAGAAGACGCATTCCTTACAAGAATATCTGGTTGACCAAGGCTCGAAGCAATTCATTCATGACAGCATTCTTGGAGCAAAACGAAAGAAATATGGAGTTAGGAGGGACATATTTTGAACTGCTTGACACTATTAGACATTTCGTATGTCACAGGCTGGACTTGCTGAAGCTCGGTTTCAGATATAAGGCAAACGAGGTAGACCGCATGTGGTATGCAGAGTTTCCTACACTTTTAGCTGAGTTGCAGTTAGCTCTGTTCCTGGTTGGTCGACTTGAAGAACTGGAATTGGAGAAGAACTTTATGAACAGAAAACCAATGCGACCCAAAGTGTCAAGCCATGGTACTTTCTAACTTTCTATTCATTTCACTTCCTCCTCACCCCCCCCCAACGCCTTCTTTTTTTTTTGTACAATATGCTTGCCTGGTAATTTTGGATGCTTGTTCCTGGATATGTTAGTGAAGTTGATAGCTCAAGCCCTTTGAGTTCCAGGTCTTAGTACGTTCTACTGTATGTTCCCTGTTCAAGATGAAATGTATGTTGCACTTTATTTGCCCTGAGTTGCAGTCCTGTTAACATGAGGATGCCAAATGG]
[+] EMBL CB637208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATAACACTTTACAGTACAATTAGCACAAAAATAAGAAGACGCATTCCTTACAAGAATATCTGGTTGACCAAGGCTCGAAGCAATTCATTCATGACAGCATTCTTGGAGCAAAACGAAAGAAATATGGAGTTAGGAGGGACATATTTTGAACTGCTTGACACTATTAGACATTTCGTATGTCACAGGCTGGACTTGCTGAAGCTCGGTTTCAGATATAAGGCAAACGAGGTAGACCGCATGTGGTATGCAAAGTTTCCTACACTTTTAGCTGAGTTGCAGTTAGCTCTGTTCCTGGTTGGTCGACTTGAAGAACTGGAATTGGAGAAGAACTTTATGAACAGAAAACCAATGCGACCCAAAGTGTCAAGCCATGGTACTTTCTAACTTTCTATTCATTTCACTTCCTCCTCACCCCCCCCCAACGCCTTCTTTTTTTTTTGTACAATATGCTTGCCTGGTAATTTTGGATGCTTGTTCCTGGATATGTTAGTGAAGTTGATAGCTCAAGCCCTTTGAGTTCCAAGTCTTA                                                                                                ]


>consensus_4752#0 GTACAATTGATGAAACACTTCTTCAGCTGAAATTCGATCCAAAAGAGTTTGCTAGATGCA ATAAGTTGATGGAGACATACAATGTGTTAGGTCAAGAATGGACATTCACTAAGCTGAAGG AACAGACCAAATATCTCTTTGATTCATTGATTGTGCTGGTTGAGTCGTTTCACGAGGCAG GCTATTGTTTCTCTCAGATATCCACAAGCACCGTTCTGGTAACATCATCTTGGAAATTTG TTCTGCTAGAGGGGTGTTTTGCTCTTAATAACTGGAGTGTTGAAGGGGTTAGAAAGGACT ACAGAGATATTGCTGTTTTGTTCAGGAAGCTCCTATCCGAGTCCATGGGTGAAGAGACAG TTCATCCCCCTGATTTTGGGATGCTACTCAGCTTGATGGAAAAGGATGGCTTTCGGTACA AGTACTTGATTGGTACTCACGTATCATTGTTACCTGATGATAACATTAACATTGCTTATA TGAAGATTCATGAGTTCATTCGGAAAATTTTGCTGGCTGAAGAGAAGGATAAAGCCAGGC AACTGAAACTCGGTATAACACGTTACAGTACAATTAGCACAAGAATAAGAAGACGCATTC CTTACAAGAATATCTGGTTGACCAAGGCTCGAAGCAATTCATTCATGACAGCATTCTTGG AGCAAAACGAAAGAAATATGGAGTTAGGAGGGACATATTTTGAACTGCTTGACACTATTA GACATTTCGTATGTCACAGGCTGGACTTGCTGAAGCTCGGTTTCAGATATAAGGCAAACG AGGTAGACCGCATGTGGTATGCAGAGTTTCCTACACTTTTAGCTGAGTTGCAGTTAGCTC TGTTCCTGGTTGGTCGACTTGAAGAACTGGAATTGGAGAAGAACTTTATGAACAGAAAAC CAATGCGACCCAAAGTGTCAAGCCATGGTACTTTCTAACTTTCTATTCATTTCACTTCCT CCTCACCCCCCCCCAACGCCTTCTTTTTTTTTTGTACAATATGCTTGCCTGGTAATTTTG GATGCTTGTTCCTGGATATGTTAGTGAAGTTGATAGCTCAAGCCCTTTGAGTTCCAGGTC TTAGTACGTTCTACTGTATGTTCCCTGTTCAAGATGAAATGTATGTTGCACTTTATTTGC CCTGAGTTGCAGTCCTGTTAACATGAGGATGCCAAATGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)