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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4758 cluster # 4758       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4758#0 length = 959 sequences # 3  

consensusID : consensus_4758#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 959
fasta sequence
                              [GTACAAGCGATGTTGGGCTGGAATGTCCTGTACTGCGTCCTGGACACTCAGAATGGTTATGTCAATTATTAAAAAAGCTGGGGGAGCCTTGAAATGGCTAATTCAGGAACAAGAAGGTGCTGCACGCAGAATGCACATATATTCAGGGATAGTTGTTCCTGCTCCCCATGTGACAGTGGGTTTCACCACGTGTTTCCAACTTCCGGATGCAGAAATGAACTCATTCCTGCTGTTCACCTGTAAGGTTATGGAAAGAGCAGAGATCAGTATATCTGTTCGAAGCTACAAATCCTGAGCAGCATGGTGGGATAGGCTGCTCAACCGCAGCAACAGGTTGAAGTGGTTGGACGATGACCGTCATGAAATACCAATAACAACAAATGGAAGGACGTTTATATCGTGAGACACTCTGGCAGTTAGGCTATATAAACTCGTGGAAGACGAAAAGCATGTTACTACCTTCATCTCAAAATATAAGGGATTTCGGCAATGCAAAAATCCCTTATA-TTTTCAGGAAGGAGGTAATACCTACGAAGAAATCTGCTCCAACGTGTAGCATCAGTTGAACT--GTGGAAGTGTCACT-GGCAGTTTGTCGCCAGGCATAACATTGGAAGCACGAGTGCACGAC-TGGTGTGCGGAAGCAATTGTAC-AAAATTACGTCAACTAAGAGACATGGAACACAACTGATTCCCT-GGAGCAGTC-AAAAGGGTACCCTGAGCAGAACAACTGATTTTCGGCAGAGAACTTCCCAAGTTATAGGAAGTATCTGTTCCAT-GAACTGTAGTACTAATTTAGAATTTAAGTTAATTCACCCTTAAGTTATTATACTTTTCATGGATTTCGGATTGTTGCAGTCTGAACTATGGAATTCAAGNTATACAAACTTGTAAGAACGGCACCGTAGTGTATAGTACATCTGGATGAAATGGTGAACGGCATATGANGCCAAGGCGNTTGGG]

[+] EMBL CB096757             [GTACAAGCGATGTTGGGCTGGAATGTCCTGTACTGCGTCCTGGACACTCAGAATGGTTATGTCAATTATTAAAAAAGCTGGGGGAGCCTTGAAATGGCTAATTCAGGAACAAGAAGGTGCTGCACGCAGAATGCACATATATTCAGGGATAGTTGTTCCTGCTCCCCATGTGACAGTGGGTTTCACCACGTGTTTCCAACTTCCGGATGCAGAAATGAACTCATTCCTGCTGTTCACCTGTAAGGTTATGGAAAGAGCAGAGATCAGTATATCTGTTCGAAGCTACAAATCCTGAGCAGCATGGTGGGATAGGCTGCTCAACCGCAGCAACAGGTTGAAGTGGTTGGACGATGACCGTCATGAAATACCAATAACAACAAATGGAAGGACGTTTATATCGTGAGACACTCTGGCAGTTAGGCTATATAAACTCGTGGAAGACGAAAAGCATGTTACTACCTTCATCTCAAAATATAAGGGATTTCGGCAATGCAAAAATCCCTTATATTTTTCAGGAAGGAGATAATACCTACGAAGAAATCTGCTCCAACGTGTAGCATCAGTTGAACTGGGGGGAAGTGTCACTGGGCAGTTTGTCGCCAGGCATAACATTGGAAGCACGAGTGCACGACTTGGTGTGCGGAAGCAATTGTACAAAAATTACGTCAACTAAGAGACATGGAACACAACTGATTNCCTGGGAGCAGTCAAAAAGGGTACCCTGAGCAGAACAACTGATTTTCGGCAGA NACTTTCC AGNTTTAGGAAGNATCTGTT CATGGAACTGGAGTACTAATTT                                                                                                                                                                      ]
[+] EMBL CA765201             [                                                                                                                                                                              AGTGGGTTT ACCACGTGTTTCC ACTTCCGGATGCAGAAATGAACTCACTCCTGCTGTTCACCTGTAAGGTTATGGAAAGAGCAGAGATCAGTATATCTGTTCGAAGCTACAAATCCTGAGCAGCATGGTGGGATAGGCTGCTCAACCGCAGCAACAGGTTGAAGTGGTTGGACGATGACCGTCATGAAATACCAATAACAACAAATGGAAGGACGTTTATATCGTGAGACACTCTGGCAGTTAGGCTATATAAACTCGTGGAAGACGAAAAGCATGTTACTACCTTCATCTCAAAATATAAGGGATTTCGGCAATGCAAAAATCCCTTATA TTTTCAGGAAGGAGGTAATACCTACGAAGAAATCTGCTCCAACGTGTAGCATCAGTTGAACT  GTGGAAGTGTCACT GGCAGTTTGTCGCCAGGCATAACATTGGAAGCACGAGTGCACGAC TGGTGTGCGGAAGCAATTGTAC AAAATTACGTCAACTAAGAGACATGGAACACAACTGATTCCCT GGAGCAGTC AAAAGGGTACCCTGAGCAGAACAACTGATTTTCGGCAGAGAACTTCCCAAGTTATAGGAAGTATCTGTTCCAT GAACTGTAGTACTAATTTAGAATTTAAGTTAATTCACCCTTAAGTTATTATACTTTTCATGGATTTCGGATTGTTGCAGTCTGAACTATGGAATTCAAGNTATACAAACTTGTAAGAACGGCACCGTAGTGTATAGTACATCTGGATGAAATGGTGAACGGCATATGANGCCAAGGCGNTTGG ]
[-] EMBL CB674027             [                                                                                                                                                                                                                                                                 CAGAGATCAGTATATCTGTTCGAAGCTACAAATCCTGAGCAGCATGGTGGGATAGGCTGCTCAACCGCAGCAACAGGTTGAAGTGGTTGGACGATGACCGTCATGAAATACCAATAACAACAAATGGAAGGACGTTTATATCGTGAGACACTCTGGCAGTTAGGCTATATAAACTCGTGGAAGACGAAAAGCATGTTACTACCTTCATCTCAAAATATAAGGGATTTCGGCAATGCAAAAATCCCTTATA TTTTCAGGAAGGAGGTAATACCTACGAAGAAATCTGCTCCAACGTGTAGCATCAGTTGAACT  GTGGAAGTGTCACT GGCAGTTTGTCGCCAGGCATAACATTGGAAGCACGAGTGCACGAC TGGTGTGCGGAAGCAATTGTAC AAAATTACGTCAACTAAGAGACATGGAACACAACTGATTCCCT GGAGCAGTC AAAAGGGTACCCTGAGCAGAACAACTGATTTTCGGCAGAGAACTTCCCAAGTTATAGGAAGTATCTGTTCCAT GAACTGTAGTACTAATTTAGAATTTAAGTTAATTCACCCTTAAGTTATTATACTTTTCATGGATTTCGGATTGTTGCAGTCTGAACTATGGAATTCAAGTTATACAAACTTGTAAGAACGGCACCGTAGTGTATAGTACATCTGGATGAAATGTTGAATGGCATATGAGGCCAAGGCGTTTGGG]


>consensus_4758#0 GTACAAGCGATGTTGGGCTGGAATGTCCTGTACTGCGTCCTGGACACTCAGAATGGTTAT GTCAATTATTAAAAAAGCTGGGGGAGCCTTGAAATGGCTAATTCAGGAACAAGAAGGTGC TGCACGCAGAATGCACATATATTCAGGGATAGTTGTTCCTGCTCCCCATGTGACAGTGGG TTTCACCACGTGTTTCCAACTTCCGGATGCAGAAATGAACTCATTCCTGCTGTTCACCTG TAAGGTTATGGAAAGAGCAGAGATCAGTATATCTGTTCGAAGCTACAAATCCTGAGCAGC ATGGTGGGATAGGCTGCTCAACCGCAGCAACAGGTTGAAGTGGTTGGACGATGACCGTCA TGAAATACCAATAACAACAAATGGAAGGACGTTTATATCGTGAGACACTCTGGCAGTTAG GCTATATAAACTCGTGGAAGACGAAAAGCATGTTACTACCTTCATCTCAAAATATAAGGG ATTTCGGCAATGCAAAAATCCCTTATATTTTCAGGAAGGAGGTAATACCTACGAAGAAAT CTGCTCCAACGTGTAGCATCAGTTGAACTGTGGAAGTGTCACTGGCAGTTTGTCGCCAGG CATAACATTGGAAGCACGAGTGCACGACTGGTGTGCGGAAGCAATTGTACAAAATTACGT CAACTAAGAGACATGGAACACAACTGATTCCCTGGAGCAGTCAAAAGGGTACCCTGAGCA GAACAACTGATTTTCGGCAGAGAACTTCCCAAGTTATAGGAAGTATCTGTTCCATGAACT GTAGTACTAATTTAGAATTTAAGTTAATTCACCCTTAAGTTATTATACTTTTCATGGATT TCGGATTGTTGCAGTCTGAACTATGGAATTCAAGNTATACAAACTTGTAAGAACGGCACC GTAGTGTATAGTACATCTGGATGAAATGGTGAACGGCATATGANGCCAAGGCGNTTGGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)