These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4763#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 548 fasta sequence [AACATTCCAGGGACTGATGAAGGATCAGTTT-GC-ATTATGTTGTACAGAGAATCCTTCAGACATGTGATGAC-AATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT-CATTACAGGAGAAAA--CCGAGT-GCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGT-CACT-AAGCTGTACAGAT-GTTGACGCTAATCCTTTTTAAGCATTGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAAAAAGCAAAGCGTGTCGTTTAAAAAAA] [+] EMBL BI808655 [AACATTCCAGGGACTGATGAAGGATCAGTTT GC ATTATGTTGTACAGAGAATCCTTCAGACATGTGATGAC AATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT CATTACAGGAGAAAA CCGAGT GCGGATGGGGTCCAAGACTAGCC ATGTCAGCAGT CACT AAGCTGTACAGAT GTTGACGCTAATCCTTTTTAAGCATTGGCATC ATAAGGAAATCTGGTGAATTGAC AATGTGGAGATTTTTGTTTTGAGATAC CTGTAATAGCC ATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAAAAA ] [+] EMBL OS0820A [ ATCAGTTTGGCAATTATGTTGTACAGAGAATCCTTCAGACATGTGATGACAAATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT CATTACAGGAGAAAA CCGAGT GCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGT CACT AAGCTGTACAGAT GTTGACGCTAATCCTTTTTAAGCATNGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTG ] [+] EMBL C98156 [ TAATCCATTACAGGAGAAAAACCCGAGTNCCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGTCCACTAAAGCTGTACAGATGGTTGACGCTAATCCTTTTTAAGCATTGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAGTTGGCAAAGCGTGTCGTTTAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||