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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4763 cluster # 4763       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4763#0 length = 548 sequences # 3  

consensusID : consensus_4763#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 548
fasta sequence
                              [AACATTCCAGGGACTGATGAAGGATCAGTTT-GC-ATTATGTTGTACAGAGAATCCTTCAGACATGTGATGAC-AATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT-CATTACAGGAGAAAA--CCGAGT-GCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGT-CACT-AAGCTGTACAGAT-GTTGACGCTAATCCTTTTTAAGCATTGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAAAAAGCAAAGCGTGTCGTTTAAAAAAA]

[+] EMBL BI808655             [AACATTCCAGGGACTGATGAAGGATCAGTTT GC ATTATGTTGTACAGAGAATCCTTCAGACATGTGATGAC AATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT CATTACAGGAGAAAA  CCGAGT GCGGATGGGGTCCAAGACTAGCC ATGTCAGCAGT CACT AAGCTGTACAGAT GTTGACGCTAATCCTTTTTAAGCATTGGCATC ATAAGGAAATCTGGTGAATTGAC AATGTGGAGATTTTTGTTTTGAGATAC CTGTAATAGCC ATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAAAAA                       ]
[+] EMBL OS0820A              [                       ATCAGTTTGGCAATTATGTTGTACAGAGAATCCTTCAGACATGTGATGACAAATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT CATTACAGGAGAAAA  CCGAGT GCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGT CACT AAGCTGTACAGAT GTTGACGCTAATCCTTTTTAAGCATNGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTG                                                                                                                                                                                 ]
[+] EMBL C98156               [                                                                                                                                                                          TAATCCATTACAGGAGAAAAACCCGAGTNCCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGTCCACTAAAGCTGTACAGATGGTTGACGCTAATCCTTTTTAAGCATTGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAGTTGGCAAAGCGTGTCGTTTAAAAAAA]


>consensus_4763#0 AACATTCCAGGGACTGATGAAGGATCAGTTTGCATTATGTTGTACAGAGAATCCTTCAGA CATGTGATGACAATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACT GAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAATCATTACAGG AGAAAACCGAGTGCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGTCACTAAGCTGTAC AGATGTTGACGCTAATCCTTTTTAAGCATTGGCATCAATAAGCAAATCTGGTGAATTGAC AAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGA GACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAA AGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAG TTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAAAAAGCAAAGCGTGTCGTT TAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)