These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4768#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1733 fasta sequence [AATCCACCACCTCTTTGCCATGGCCTCTCTTGCTCTGGTTTTCCTTGCCCTCTTGTTGCCTACCATCTCATGGCTATGGGACTACATCATTGTGCCCCATATATGGAGGCCTTACATTGCAGCCAAGAGGCTCAGGGAGCAAGGAATCCGTGGACTACCCTACAAGTTCTTGAAAGGCTGCAATGAGGATGTGAAGAAAATGAAGGATGCTGCAGATGATCTGGTTCTTGATGTTCATGACCACAATTACCTCCCAAGGGTTATGCCATAGTACCTGAAATGGAGATCTCAATATGGAGAGCCCTTTGTATACTGGTTTGGGGCAAAGCCTCGAATCTGCATCTTCAACTATGAGTGGGCCAGGCAGATTCTTTCAAGCAAGTCAGGACACTTTCTGAAGAATGACACTACCCCAACAGTGTT-GGCGTTGCTTGGCAA-GGGACTAGTACTGGTCGAAGGAATTGATTGGGAGCGCCATCGCAGAGTAATCAACCCTGCTTTCACCAT-GGATAAGATAAAGATGATGACAAAAACAATGGTAGCTTGTGCTCAAAACATGGTGAAGGAATTGGAAGATCAAGCATCCAGCAACAAGAATGGAGAAACTCAAGTGGAATTGGACAAACAATTCCAAGAGTTAACAGCAGATATCATATCTCATACGGCCTTCGGAAGCAGCTATAAGTTAGGAATAGAAGCGTTCCATGCACAGAAAGAGCTCCAGGAAATTGCTGTAAAATCTCTCCTCAAC-GTGCAGATACCAGGATTCAGTTCAGCTACCTTCCTACAAAAGGGAATTGGAGGAAATTGACACTTGAAAAGAAGCTTAGGGGCACTCTCATGCAGATCATACAATCCCGATTATCATCAAAAGGAAGTGGATACGGAAGCGATCTCCTTGGTTTGATGCTTGAGGCTTGCATTGCAACAGATCAGGGAAGGGAGCAACATCAGCTCAGCTTAAGCATCGATGAAATTATACATGAGTGCAAAACATTCTTCTTTGCTGGTCATGAAACCACGTCACTTCTTCTTACCTGGACAGTGTTTTTGCTCAGTGTGTATCCAGAATGGCAGGCAAGACTCCGGTTGGAAGCTTTGAGGGAATGTGGAAAAGAAAATCCAAATGGTGACAACCTTAGCAAACTGAAAGAGATGTCAATGGTATTCCTTGAGACCCTAAGGCTCTATGGTCCTGCTCTTTTCCTTCAAAGAAAACCTCTAACAGATATTACAGTAGGAGAAACAAAAATACCCAAAGACCATGCAATTATCATACCTTCAGCAATTATGCACCGGGACAAGGAGATTTGGGGTGACGATACAGATGAATTCAATCCATTAAGATTTCAGAACGGGGTCACAAGAGCAGCCAAAGTTCCACATGCCCTACTGGCATTCTCAATAGGGCCAAGGTCTTGCATCGGTCAGAATTTTGCGATGTTGGAAGCCAAGTCAGTTATGGCTATGATCCTAAAAAAGTTCTCATTCACACTTTCCCCTAACTATGTTCATGCACCTGTAGACCTGTTAACTCTTCAGCCTAAGTTTGGTCTTCCTGTTGTTCTAAGGCTACTGGATGCATGAAGTTAGATGATTTACATGTTACCAAACTTAAATGGAATCTGTATGCCAAAGGTTGCTACTGACCTACGGCACTATACATTGTACCCCACAGTGGATGTATCCTTATAAAATAAAATAGCTCGGGCCATGATTCAATGTGAATTACT] [+] EMBL AK069394 [AATCCACCACCTCTTTGCCATGGCCTCTCTTGCTCTGGTTTTCCTTGCCCTCTTGTTGCCTACCATCTCATGGCTATGGGACTACATCATTGTGCCCCATATATGGAGGCCTTACATTGCAGCCAAGAGGCTCAGGGAGCAAGGAATCCGTGGACTACCCTACAAGTTCTTGAAAGGCTGCAATGAGGATGTGAAGAAAATGAAGGATGCTGCAGATGATCTGGTTCTTGATGTTCATGACCACAATTACCTCCCAAGGGTTATGCCATAGTACCTGAAATGGAGATCTCAATATGGAGAGCCCTTTGTATACTGGTTTGGGGCAAAGCCTCGAATCTGCATCTTCAACTATGAGTGGGCCAGGCAGATTCTTTCAAGCAAGTCAGGACACTTTCTGAAGAATGACACTACCCCAACAGTGTT GGCGTTGCTTGGCAA GGGACTAGTACTGGTCGAAGGAATTGATTGGGAGCGCCATCGCAGAGTAATCAACCCTGCTTTCACCAT GGATAAGATAAAGATGATGACAAAAACAATGGTAGCTTGTGCTCAAAACATGGTGAAGGAATTGGAAGATCAAGCATCCAGCAACAAGAATGGAGAAACTCAAGTGGAATTGGACAAACAATTCCAAGAGTTAACAGCAGATATCATATCTCATACGGCCTTCGGAAGCAGCTATAAGTTAGGAATAGAAGCGTTCCATGCACAGAAAGAGCTCCAGGAAATTGCTGTAAAATCTCTCCTCAAC GTGCAGATACCAGGATTCAGTTCAGCTACCTTCCTACAAAAGGGAATTGGAGGAAATTGACACTTGAAAAGAAGCTTAGGGGCACTCTCATGCAGATCATACAATCCCGATTATCATCAAAAGGAAGTGGATACGGAAGCGATCTCCTTGGTTTGATGCTTGAGGCTTGCATTGCAACAGATCAGGGAAGGGAGCAACATCAGCTCAGCTTAAGCATCGATGAAATTATACATGAGTGCAAAACATTCTTCTTTGCTGGTCATGAAACCACGTCACTTCTTCTTACCTGGACAGTGTTTTTGCTCAGTGTGTATCCAGAATGGCAGGCAAGACTCCGGTTGGAAGCTTTGAGGGAATGTGGAAAAGAAAATCCAAATGGTGACAACCTTAGCAAACTGAAAGAGATGTCAATGGTATTCCTTGAGACCCTAAGGCTCTATGGTCCTGCTCTTTTCCTTCAAAGAAAACCTCTAACAGATATTACAGTAGGAGAAACAAAAATACCCAAAGACCATGCAATTATCATACCTTCAGCAATTATGCACCGGGACAAGGAGATTTGGGGTGACGATACAGATGAATTCAATCCATTAAGATTTCAGAACGGGGTCACAAGAGCAGCCAAAGTTCCACATGCCCTACTGGCATTCTCAATAGGGCCAAGGTCTTGCATCGGTCAGAATTTTGCGATGTTGGAAGCCAAGTCAGTTATGGCTATGATCCTAAAAAAGTTCTCATTCACACTTTCCCCTAACTATGTTCATGCACCTGTAGACCTGTTAACTCTTCAGCCTAAGTTTGGTCTTCCTGTTGTTCTAAGGCTACTGGATGCATGAAGTTAGATGATTTACATGTTACCAAACTTAAATGGAATCTGTATGCCAAAGGTTGCTACTGACCTACGGCACTATACATTGTACCCCACAGTGGATGTATCCTTATAAAATAAAATAGCTCGGGCCATGATTCAATGTGAATTACT] [+] EMBL C26232 [ TCATTGTGCCCCATATATGGAGGCCTTACATTGCAGCCAAGAGG TCAGGGA NAAGGAATCCGTGGACCACCCTACAAGTTCTTGAAAGGCTGCAATGAGGATGTGAAGAAAATGAAGGATGCTGCAGATGATCTGGTTCTTGATGTTCATGACCACAATTACCTCCCAAGGGTTATGCCATAGTACCTGAAATGGAGATCTCAATATGGAGAGCCCTTTGTATACTGGTTTGGGGCAAAG CTCGAATCTGCATCTTCAACTATGAGTGGGCCAGGCAGATTCTTTCAAGCAAGTCAGGACACTTTCTGAAGAATGACACTACCCCAACAGTGTTNGGCGTTGCTTNGCAAGGGGACTAGTACTTGTCGAAGGAATTGATTGGGAGCGCCATCGCAGAGTAATC ACCCTGCTTTCACCATNGGATAAGAT AAGGTGATGA ] [+] EMBL OS1186A [ CGTTGCTTGGCAA GGGACTAGTACTGGTCGAAGGAATTGATTGGGAGCGCCATCGCAGAGTAATCAACCCTGCTTTCACCAT GGATAAGATAAAGATGATGACAAAAACAATGGTAGCTTGTNCTCAAAACATGGTGAAGGAATTGGAAGATCAAGCATCCAGCAACAAGAATGGAGAAACTCAAGTGGAATTGGACAAACAATTCCAAGAGTTAACAGCAGATATCATATCTCATACGGCCTTCGGAAGCAGCTATAAGTTAGGAATAGAAGCGTTCCATGCACAGANAGAGCTCCAGGAAATTGCTGTAAAATCTCTCCTCAACGGTGCAGATACCAGG GTTCAGCTACCTTCCTACAAANGGGAATTGGAGG AATTTACACTTGAAAAG AGCTTAGGGGCACTCTCATGCAGTTCATACAATCCCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||