cluster # 4774

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Oryza sativa
cluster # 4774 cluster # 4774 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4774#0 length = 1859 sequences # 3
consensusID : consensus_4774#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1859
fasta sequence
                              [TTCAGGTCAGCTAGCTACTGCAAATAGTCAATGAGTGAGGAGGCACCGCCATCGCCGGTGATGAGGCCGGTGTTCTACGATGGCTGCCCCGGCTGCGCCATGGAACGGAAGCTGGAGAGCAGCCAAGGCATCCCCTACAAGGAGTTCTTCTTTGTTGGGATCACCACCATTGCCTCTTCTTTACCAATATCCTCGTTGTTCCCATTCCTCTACTTCATGATAGAAGATCTGCATGTGGCAAAAAAGGAACAAGATATTGGATTATACGCTGGATTTCTTGGTGCATCATATATGATCGGTAGATGTTTTGCCTCACTCTTTTGGGGTGTAGTTGCAGATCGTATAGGGAGGAAGCCTATCATTAAATTTTCTATTTTATCAGTGGTCATATTCAACACTCTGTTCGGATTAAGTGTGAAGTATTGGATGGCAATCGCCACAAGATTCCTTCTTGGTGCTCTAAATGGCATGCTGGCCCCAATAAAGGCTTATTCCATTGAAGTTTGTCGACCTGAACATCAAGCTCTAGGATTATCAATAGTAAGCACTGGTTGGGGCGTAGGGCTTGTTGTGGGTCCAGCCATTGGAGGCTACTTTGCACAGCCTGCTAAGCAATATCCAAATGTATTTTCCGAGAAGTCAATATTTGGGAGGTTCCCATACTTCTTGCCATGCCTTTGTATCTCACTCATTGCTCTTGTTGTTCTTATAAGCTGCATATGGCTACCGGAGACACTTCATAAGCATAAAGATACTGAAGGTGAAATTGAAATGATTGACGACTCAAGAAGTACACTTGAAGAAGATTCACATAAACAGAAGAGTCTCTACAAGAACTGGCCATTGATATCCTCTATTATTGCATATTGTGTTTTCACCCTTCATGATACAGCATATAGTGAGATATTTTCCTTATGGGCTGTAAGTGAGAAAAGATATGGTGGGTTAAGTTTTTCGTCTAAAGAAGTTGGTCAAGTTCTTGCAGTTGCAGGTGCTGGTCTACTTGTGTATCAGCTTTTCATCTATAGATCGGTCCATAAATTTCTTGGATCCATCAATTCATCTCGTATTGCATCAGCTTTATCTGTACCAATTCTCGCTACTTATCCCTTTATGACACACTTGTCAGGGTTTAGACTT-GGAATAGCTCTTTACCTT-GGAACCATTTTAAAGGGTGTTTTATCAATAACTATCATAACGGGCACTTCCCTACTCCAAAATAATGCGGTTTCACAAAGTCAAAGAGGTGCTGCAAATGGCATATCTACGACGGCAATGTCATTCTTCAAGGCAATTGCTCCAGCAGGAGCAGGAGCTCTGTTCTCTTGGGCCCAAGAACGCCAAAATGAAGCCTTCTTCCCAGGGGATCAAATGATATTCTTTATTCTGAATGTGATTGAATTAATTGGACTTGCGTTGACCTTCAAGCCGTTCCTGGCAATACCAAATT-AAACAATTATCAGTTGAAGTAGAAGCTGGAATAGCACCCCCAAGCAATGAAGAATTATTATGCAAGACTA-CACTGTGTTGTGGTTTACTGAATTGATGTTTGGCTTAAGTGATGTACATAGAAATATATGGCCCATCTTCAGAATCATAAAATTAATGTACAAGAGACTGTTTATCTGAAAATGTTCTTCTTTCCATGAAGACCCTATGTATGGTGATGGATTAGAGTTTACATTGCGTGGATGCAAGCATAGACTTGAAGGCAGTGCAATGACTACTAATTTTAGCTTCCACATTTCTTGTACGCAAGCCTGTCTCTCTCCCCAGCTTCAAAGGAATGGGGAGATCTTGTTTCATGCGTACAGTGTTGGATGTTTACTACTCCGAATCAATCAATTACCCAGGAATTC]

[+] EMBL AK069533             [TTCAGGTCAGCTAGCTACTGCAAATAGTCAATGAGTGAGGAGGCACCGCCATCGCCGGTGATGAGGCCGGTGTTCTACGATGGCTGCCCCGGCTGCGCCATGGAACGGAAGCTGGAGAGCAGCCAAGGCATCCCCTACAAGGAGTTCTTCTTTGTTGGGATCACCACCATTGCCTCTTCTTTACCAATATCCTCGTTGTTCCCATTCCTCTACTTCATGATAGAAGATCTGCATGTGGCAAAAAAGGAACAAGATATTGGATTATACGCTGGATTTCTTGGTGCATCATATATGATCGGTAGATGTTTTGCCTCACTCTTTTGGGGTGTAGTTGCAGATCGTATAGGGAGGAAGCCTATCATTAAATTTTCTATTTTATCAGTGGTCATATTCAACACTCTGTTCGGATTAAGTGTGAAGTATTGGATGGCAATCGCCACAAGATTCCTTCTTGGTGCTCTAAATGGCATGCTGGCCCCAATAAAGGCTTATTCCATTGAAGTTTGTCGACCTGAACATCAAGCTCTAGGATTATCAATAGTAAGCACTGGTTGGGGCGTAGGGCTTGTTGTGGGTCCAGCCATTGGAGGCTACTTTGCACAGCCTGCTAAGCAATATCCAAATGTATTTTCCGAGAAGTCAATATTTGGGAGGTTCCCATACTTCTTGCCATGCCTTTGTATCTCACTCATTGCTCTTGTTGTTCTTATAAGCTGCATATGGCTACCGGAGACACTTCATAAGCATAAAGATACTGAAGGTGAAATTGAAATGATTGACGACTCAAGAAGTACACTTGAAGAAGATTCACATAAACAGAAGAGTCTCTACAAGAACTGGCCATTGATATCCTCTATTATTGCATATTGTGTTTTCACCCTTCATGATACAGCATATAGTGAGATATTTTCCTTATGGGCTGTAAGTGAGAAAAGATATGGTGGGTTAAGTTTTTCGTCTAAAGAAGTTGGTCAAGTTCTTGCAGTTGCAGGTGCTGGTCTACTTGTGTATCAGCTTTTCATCTATAGATCGGTCCATAAATTTCTTGGATCCATCAATTCATCTCGTATTGCATCAGCTTTATCTGTACCAATTCTCGCTACTTATCCCTTTATGACACACTTGTCAGGGTTTAGACTT GGAATAGCTCTTTACCTT GGAACCATTTTAAAGGGTGTTTTATCAATAACTATCATAACGGGCACTTCCCTACTCCAAAATAATGCGGTTTCACAAAGTCAAAGAGGTGCTGCAAATGGCATATCTACGACGGCAATGTCATTCTTCAAGGCAATTGCTCCAGCAGGAGCAGGAGCTCTGTTCTCTTGGGCCCAAGAACGCCAAAATGAAGCCTTCTTCCCAGGGGATCAAATGATATTCTTTATTCTGAATGTGATTGAATTAATTGGACTTGCGTTGACCTTCAAGCCGTTCCTGGCAATACCAAATT AAACAATTATCAGTTGAAGTAGAAGCTGGAATAGCACCCCCAAGCAATGAAGAATTATTATGCAAGACTA CACTGTGTTGTGGTTTACTGAATTGATGTTTGGCTTAAGTGATGTACATAGAAATATATGGCCCATCTTCAGAATCATAAAATTAATGTACAAGAGACTGTTTATCTGAAAATGTTCTTCTTTCCATGAAGACCCTATGTATGGTGATGGATTAGAGTTTACATTGCGTGGATGCAAGCATAGACTTGAAGGCAGTGCAATGACTACTAATTTTAGCTTCCACATTTCTTGTACGCAAGCCTGTCTCTCTCCCCAGCTTCAAAGGAATGGGGAGATCTTGTTTCATGCGTACAGTGTTGGATGTTTACTACTCCGAATCAATCAATTACCCAGGAATTC]
[+] EMBL OSR19571A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCATATTGTGTTTTCACCCTTCATGATACAGCATATAGTGAGATATTTTCCTTATGGGCTGTAAGTGAGAAAAGATATGGTGGGTTAAGTTTTTCGTCTAAAGAAGTTGGTCAAGTTCTTGCAGTTGCAGGTGCTGGTCTACTTGTGTATCAGCTTTTCATCTATAGATCGGTCCATAAATTTCTTGGATCCATCAATTCATCTCGTATTGCATCAGCTTTATCTGTACCAATTCTCGCTACTTATCCCTTTATGACACACTTGTCAGGGTTTAGACTTGGGAATAGCTCTTTACCTTGGGAACCATTTTAAAGGGTGTTTTATCAATAACTATCATAACGGGCACTTCCCTACTCCAAAATAATGCGGNTTCACAAAGTCAAAGAGGTGCTGCAAATGGCATATCTACGACGGCAATGTCATTCTTCAAGGCAA TGCTCCAGCAGGGGCAGGAGCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU031823             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTGGACTTGCGTTGACCTTCAAGCCGTTCCTGGCAATACCAAATTNCAACAATTATCAGTTGAAGTAGAAGCTGGAATANCACCCCCAAGCAATGAAGAATTATTATGCAAGACTACCACTGTGTTGTGGTTTACTGAATTGATGTTTGGCTTAAGTGATGTACATAGAAATATATGGCCCATCTTCAGAATCATAAAATTAATGTACAAGAGACTGTTTATCTGAAAATGTTCTTCTTTCCATGAAGACCCTATGTATGGTGATGGATTAGAGTTTACATTGCGTGGATGCAAGCATAGACTTGAAGGCAGTGCAATGACTACTAATTTTAGCTTCCACATTTCTTGTACGCAAGCCTGTCTCTCTCCCCAGCTTCAAAGGAATGGGGAGATCTTGTTTCATGCGTACAGTGTTGGATGTTTACTACTCCAAAaaaaa                 ]




>consensus_4774#0
TTCAGGTCAGCTAGCTACTGCAAATAGTCAATGAGTGAGGAGGCACCGCCATCGCCGGTG
ATGAGGCCGGTGTTCTACGATGGCTGCCCCGGCTGCGCCATGGAACGGAAGCTGGAGAGC
AGCCAAGGCATCCCCTACAAGGAGTTCTTCTTTGTTGGGATCACCACCATTGCCTCTTCT
TTACCAATATCCTCGTTGTTCCCATTCCTCTACTTCATGATAGAAGATCTGCATGTGGCA
AAAAAGGAACAAGATATTGGATTATACGCTGGATTTCTTGGTGCATCATATATGATCGGT
AGATGTTTTGCCTCACTCTTTTGGGGTGTAGTTGCAGATCGTATAGGGAGGAAGCCTATC
ATTAAATTTTCTATTTTATCAGTGGTCATATTCAACACTCTGTTCGGATTAAGTGTGAAG
TATTGGATGGCAATCGCCACAAGATTCCTTCTTGGTGCTCTAAATGGCATGCTGGCCCCA
ATAAAGGCTTATTCCATTGAAGTTTGTCGACCTGAACATCAAGCTCTAGGATTATCAATA
GTAAGCACTGGTTGGGGCGTAGGGCTTGTTGTGGGTCCAGCCATTGGAGGCTACTTTGCA
CAGCCTGCTAAGCAATATCCAAATGTATTTTCCGAGAAGTCAATATTTGGGAGGTTCCCA
TACTTCTTGCCATGCCTTTGTATCTCACTCATTGCTCTTGTTGTTCTTATAAGCTGCATA
TGGCTACCGGAGACACTTCATAAGCATAAAGATACTGAAGGTGAAATTGAAATGATTGAC
GACTCAAGAAGTACACTTGAAGAAGATTCACATAAACAGAAGAGTCTCTACAAGAACTGG
CCATTGATATCCTCTATTATTGCATATTGTGTTTTCACCCTTCATGATACAGCATATAGT
GAGATATTTTCCTTATGGGCTGTAAGTGAGAAAAGATATGGTGGGTTAAGTTTTTCGTCT
AAAGAAGTTGGTCAAGTTCTTGCAGTTGCAGGTGCTGGTCTACTTGTGTATCAGCTTTTC
ATCTATAGATCGGTCCATAAATTTCTTGGATCCATCAATTCATCTCGTATTGCATCAGCT
TTATCTGTACCAATTCTCGCTACTTATCCCTTTATGACACACTTGTCAGGGTTTAGACTT
GGAATAGCTCTTTACCTTGGAACCATTTTAAAGGGTGTTTTATCAATAACTATCATAACG
GGCACTTCCCTACTCCAAAATAATGCGGTTTCACAAAGTCAAAGAGGTGCTGCAAATGGC
ATATCTACGACGGCAATGTCATTCTTCAAGGCAATTGCTCCAGCAGGAGCAGGAGCTCTG
TTCTCTTGGGCCCAAGAACGCCAAAATGAAGCCTTCTTCCCAGGGGATCAAATGATATTC
TTTATTCTGAATGTGATTGAATTAATTGGACTTGCGTTGACCTTCAAGCCGTTCCTGGCA
ATACCAAATTAAACAATTATCAGTTGAAGTAGAAGCTGGAATAGCACCCCCAAGCAATGA
AGAATTATTATGCAAGACTACACTGTGTTGTGGTTTACTGAATTGATGTTTGGCTTAAGT
GATGTACATAGAAATATATGGCCCATCTTCAGAATCATAAAATTAATGTACAAGAGACTG
TTTATCTGAAAATGTTCTTCTTTCCATGAAGACCCTATGTATGGTGATGGATTAGAGTTT
ACATTGCGTGGATGCAAGCATAGACTTGAAGGCAGTGCAATGACTACTAATTTTAGCTTC
CACATTTCTTGTACGCAAGCCTGTCTCTCTCCCCAGCTTCAAAGGAATGGGGAGATCTTG
TTTCATGCGTACAGTGTTGGATGTTTACTACTCCGAATCAATCAATTACCCAGGAATTC
clustalw multiple alignements is not computed in this case