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Oryza sativa
cluster # 4775 cluster # 4775       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4775#0 length = 1497 sequences # 3  

consensusID : consensus_4775#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1497
fasta sequence
                              [TAGAATCACAGTCCAAGAAGATAACCACTTCCTAGAGCCGGCCAAGGCAAATTAAAGTACCAAGAGAGAATTCCAGCAGCACAAAAGCTAGAGGTTTATTACTAGCAAAGCCAGTATATATCAACGGCCTGTAGCAATCTGCTGACAGGACAAGGTGTGTTCTTGCAGTCCACATAAGCAGAAACCAAGTAAGGATAAACATAAAACGACGTCATTTCGATCGATTGAGTATATATATACTTCTAGCTAGTGATCTCTCTTCCTTGTCACATATATTTCGTCTATGTTATTTATTTACAGGCCCACTACTACACATCGTCCTTGTATGGGCAAAAAAATATTCTCTCTGTCCTAGCTGGTCTTGAGGAAATATTTCTCGAACTAAAACCAATTATTGAACTCTTTTAAAGTTGACAAACTAGTAGGATGTTAATTAAACAGGTCACATTTTATTTTCAGAGCAAAAGGCTCAGCTAGCTATATAGTTGGAGGTTGGAGATAGAAGTCGATCATCCATCAACCAGTTGCTGCCTCCAATTAATTCTCAAAATTTTGAAGTCCGCGTATATATTGTTGAAACAGGAACTCAATTTAATTCATCAGCAATTGACAGGTGACTAGCACCATATAGCATGCAGCTAGCCAATAATCCGGAAAAAGAAATTAAAAGGTAGATCCAAGAATGAATTAGAGCTAGAGAGACTTATATTTATAAAACGTCCTCCACCATGACAGTGACCAGATGATATAAATCCATGCGTAGTACACGGATCGAAGCACCACATAAGCAATCTGATCATCATCATCATCCTCGTCGTCGACCTCGTATAGCTCACGAGCCAGCTTTGCATGGGAGCCATGTGTGCACATAGTGCCTAATAAAATCATCATGAAACATGCAAATCCAATGGAATAGGAGGAGTCGCCACTATGCCACAAATGCTGACATGACATGTTGGCTCTCCTATGTCCACATAAGCAGGAGTATGGATAAAGTGAACTTTCCAGGTGGCCCCTCTGGCCTCCATGTATCCGACTAGGCACCCGGCCTCCCATCCACTCAAAGAGACAGCAGCAACAGGACAAGGGGTGACCTGGTGTCCACGTAGGAGCCAAAAAGCGCAGGGTAACCAACCTGATTGGGACAAGAGAAATTGCTAAGGGGCACAATTAATCAAACTCCGTGTAGCATGCATTATGTTTATTTGTGTGACTCTCTTGTGTTTCGGTGCTTCGAACCAACTGAAGATTTGTACGGAGAATAGTAAAAAAAAAAAAAATTTCAAAACGATGTAACGAGTAACCAATTCAACCGAGAAGGTGACATGTTCCTGCTACGATGAGAAAAATAGCCAATTAAGATGAAATTCAGTACACTGAAAGGACAAAACTATAGGTTGAATTTTTGGGCTTTGTATGTCACATGTTTTGTACTTTTTAGCCGGCCAGAGGTCAGCTATGAAGGTCGGATCAAATGCAAATGCCATCGTCCCTTTC]

[+] EMBL CF304320             [TAGAATCACAGTCCAAGAAGATAACCACTTCCTAGAGCCGGCCAAGGCAAATTAAAGTACCAAGAGAGAATTCCAGCAGCACAAAAGCTAGAGGTTTATTACTAGCAAAGCCAGTATATATCAACGGCCTGTAGCAATCTGCTGACAGGACAAGGTGTGTTCTTGCAGTCCACATAAGCAGAAACCAAGTAAGGATAAACATAAAACGACGTCATTTCGATCGATTGAGTATATATATACTTCTAGCTAGTGATCTCTCTTCCTTGTCACATATATTTCGTCTATGTTATTTATTTACAGGCCCACTACTACACATCGTCCTTGTATGGGCAAAAAAATATTCTCTCTGTCCTAGCTGGTCTTGAGGAAATATTTCTCGAACTAAAACCAATTATTGAACTCTTTTAAAGTTGACAAACTAGTAGGATGTTAATTAAACAGGTCACATTTTATTTTCAGAGCAAAAGGCTCAGCTAGCTATATAGTTGGAGGTTGGAGATAGAAGTCGATCATCCATCAACCAGTTGCTGCCTCCAATTAATTCTCAAAATTTTGAAGTCCGCGTATATATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB650736             [                          ACTTCCTAGAGCCGGCCAAGGCAAATTAAAGTACCAAGAGAGAATTCCAGCAGCACAAAAGCTAGAGGTTTATTACTAGCAAAGCCAGTATATATCAACGGCCTGTAGCAATCTGCTGACAGGACAAGGTGTGTTCTTGCAGTCCACATAAGCAGAAACCAAGTAAGGATAAACATAAAACGACGTCATTTCGATCGATTGAGTATATATATACTTCTAGCTAGTGATCTCTCTTCCTTGTCACATATATTTCGTCTATGTTATTTATTTACAGGCCCACTACTACACATCGTCCTTGTATGGGCAAAAAAATATTCTCTCTGTCCTAGCTGGTCTTGAGGAAATATTTCTCGAACTAAAACCAATTATTGAACTCTTTTAAAGTTGACAAACTAGTAGGATGTTAATTAAACAGGTCACATTTTATTTTCAGAGCAAAAGGCT AGCTAGCTATATAGTTGGAGGTTGGAGATAGAAGTCGATCATCCATCAACCAGTTGCTGCCTCCAATTAATTCTCAAAATTTTGAAGTCCGCGTATATATTGTTGAAACAGGAACTCAATTTAATTCATCAGCAATTGACAGGTGACTAGCACCATATAGCATGCAGCTAGCCAATAATCCGGAAAAAGAAATTAAAAGGTAGATCCAAGAATGAATTAGAGCTAGAGAGACTTATATTTATAAAACGTCCTCCACCATGACAGTGACCAGATGATATAAATCCATGCGTAGTACACGGATCGAAGCACCACATAAGCAATCTGATCATCATCATCATCCTCGTCGTCGACCTCGTATAGCTCACGAGCCAGCTTTGCATGGGAGCCATGTGTGCACATAGTGCCTAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB650737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTAGAGCTAGAGAGACTTATATTTATAAAACGTCCTCCACCATGACAGTGACCAGATGATATAAATCCATGCGTAGTACACGGATCGAAGCACCACATAAGCAATCTGATCATCATCATCATCCTCGTCGTCGACCTCGTATAGCTCACGAGCCAGCTTTGCATGGAGGCCATGTGTGCACATAGTGCCTAATAAAATCATCATGAAACATGCAAATCCAATGGAATAGGAGGAGTCGCCACTATGCCACAAATGCTGACATGACATGTTGGCTCTCCTATGTCCACATAAGCAGGAGTATGGATAAAGTGAACTTTCCAGGTGGCCCCTCTGGCCTCCATGTATCCGACTAGGCACCCGGCCTCCCATCCACTCAAAGAGACAGCAGCAACAGGACAAGGGGTGACCTGGTGTCCACGTAGGAGCCAAAAAGCGCAGGGTAACCAACCTGATTGGGACAAGAGAAATTGCTAAGGGGCACAATTAATCAAACTCCGTGTAGCATGCATTATGTTTATTTGTGTGACTCTCTTGTGTTTCGGTGCTTCGAACCAACTGAAGATTTGTACGGAGAATAGTAAAAAAAAAAAAAATTTCAAAACGATGTAACGAGTAACCAATTCAACCGAGAAGGTGACATGTTCCTGCTACGATGAGAAAAATAGCCAATTAAGATGAAATTCAGTACACTGAAAGGACAAAACTATAGGTTGAATTTTTGGGCTTTGTATGTCACATGTTTTGTACTTTTTAGCCGGCCAGAGGTCAGCTATGAAGGTCGGATCAAATGCAAATGCCATCGTCCCTTTC]


>consensus_4775#0 TAGAATCACAGTCCAAGAAGATAACCACTTCCTAGAGCCGGCCAAGGCAAATTAAAGTAC CAAGAGAGAATTCCAGCAGCACAAAAGCTAGAGGTTTATTACTAGCAAAGCCAGTATATA TCAACGGCCTGTAGCAATCTGCTGACAGGACAAGGTGTGTTCTTGCAGTCCACATAAGCA GAAACCAAGTAAGGATAAACATAAAACGACGTCATTTCGATCGATTGAGTATATATATAC TTCTAGCTAGTGATCTCTCTTCCTTGTCACATATATTTCGTCTATGTTATTTATTTACAG GCCCACTACTACACATCGTCCTTGTATGGGCAAAAAAATATTCTCTCTGTCCTAGCTGGT CTTGAGGAAATATTTCTCGAACTAAAACCAATTATTGAACTCTTTTAAAGTTGACAAACT AGTAGGATGTTAATTAAACAGGTCACATTTTATTTTCAGAGCAAAAGGCTCAGCTAGCTA TATAGTTGGAGGTTGGAGATAGAAGTCGATCATCCATCAACCAGTTGCTGCCTCCAATTA ATTCTCAAAATTTTGAAGTCCGCGTATATATTGTTGAAACAGGAACTCAATTTAATTCAT CAGCAATTGACAGGTGACTAGCACCATATAGCATGCAGCTAGCCAATAATCCGGAAAAAG AAATTAAAAGGTAGATCCAAGAATGAATTAGAGCTAGAGAGACTTATATTTATAAAACGT CCTCCACCATGACAGTGACCAGATGATATAAATCCATGCGTAGTACACGGATCGAAGCAC CACATAAGCAATCTGATCATCATCATCATCCTCGTCGTCGACCTCGTATAGCTCACGAGC CAGCTTTGCATGGGAGCCATGTGTGCACATAGTGCCTAATAAAATCATCATGAAACATGC AAATCCAATGGAATAGGAGGAGTCGCCACTATGCCACAAATGCTGACATGACATGTTGGC TCTCCTATGTCCACATAAGCAGGAGTATGGATAAAGTGAACTTTCCAGGTGGCCCCTCTG GCCTCCATGTATCCGACTAGGCACCCGGCCTCCCATCCACTCAAAGAGACAGCAGCAACA GGACAAGGGGTGACCTGGTGTCCACGTAGGAGCCAAAAAGCGCAGGGTAACCAACCTGAT TGGGACAAGAGAAATTGCTAAGGGGCACAATTAATCAAACTCCGTGTAGCATGCATTATG TTTATTTGTGTGACTCTCTTGTGTTTCGGTGCTTCGAACCAACTGAAGATTTGTACGGAG AATAGTAAAAAAAAAAAAAATTTCAAAACGATGTAACGAGTAACCAATTCAACCGAGAAG GTGACATGTTCCTGCTACGATGAGAAAAATAGCCAATTAAGATGAAATTCAGTACACTGA AAGGACAAAACTATAGGTTGAATTTTTGGGCTTTGTATGTCACATGTTTTGTACTTTTTA GCCGGCCAGAGGTCAGCTATGAAGGTCGGATCAAATGCAAATGCCATCGTCCCTTTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)