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Oryza sativa
cluster # 4819 cluster # 4819       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4819#0 length = 938 sequences # 3  

consensusID : consensus_4819#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 938
fasta sequence
                              [CGGCTCCCCCACCCACCCATGTCTCCTTCCTCCTTCCTCCACCACCCACGTCTCCTTCCTCCTTCCTCCACTCCCTCCTTTCTCCCTCCTAGCCTTCTCCCTCCCACCTCTCCCCAGCGGCGGCCGGTTGTGGCAAACGGAGAAAGGTTGCGGCCGGCTGCGCCCTCTCGCCAGATATGGGGGCGACGGCAGTGGCGGGGAAGGGGCGGCGGCTGGCTGCGGCAAAGGGCGACGGTAGCGGCGGGGAAGGGTCGGCCGGCTACGGTGGCAGGCGATGAGTCCGGCGAAGAGCTCTCCTTCTCCCTCCCACCTCTCCCTAGCAGCGGCCGGCTGCGCCCTCTTGCCAGATATGGGGGTGGCGGCAGCGGCGGGGAAGGGATGGCAACCGGCTGCGGTGGCGGGCGACGAGTCCGGCAGCAAGCTCCCCTTCTCCCTCCCACCTCTCCCCAGCGGCGGCCGGCTGCGCCCTCTTGCCAGATCTGGGGCAACAGCAGCGGCGGGGAAGGGGCGGCGGCTGGCTGCGGCAAAGGGCAACGATAGC-GGCGGGGAAGGGACGGGGGCCGGCTG-CGGTGGTGGGCGACGGGTCCGG-CGGTGGGCTCTCCTTCTCCCTCTCCCTCCTCCGCTG-CCGCTAGCTG-CCG-TCGCCACCACCGCCGTGGGCTGCCGCTAGC-TA-GGGGACGGCCGAATCCGGTCGCCGCGATGTCGGGGAGGCCGGATCCGCCGCCGCCGACGACCTGGGAGGCCGGATCCGCCGCCGCGACGACCTGGGAGGCCAGATCTG-CCGCTGACGCCGACGGGGGCAGCGCCGCGACGACTTCAAATTTTTTTTCTGATGCTTGAATGCTTGGGTGAATGGAAATTTTTTAATGTAAATTGTTGATGTAATTTTCTGTTGATTTTTGAATGCGTGGTTAAATTTCTGTGAAAAAAAAAAAAAAAAA]

[+] EMBL AK066886             [CGGCTCCCCCACCCACCCATGTCTCCTTCCTCCTTCCTCCACCACCCACGTCTCCTTCCTCCTTCCTCCACTCCCTCCTTTCTCCCTCCTAGCCTTCTCCCTCCCACCTCTCCCCAGCGGCGGCCGGTTGTGGCAAACGGAGAAAGGTTGCGGCCGGCTGCGCCCTCTCGCCAGATATGGGGGCGACGGCAGTGGCGGGGAAGGGGCGGCGGCTGGCTGCGGCAAAGGGCGACGGTAGCGGCGGGGAAGGGTCGGCCGGCTACGGTGGCAGGCGATGAGTCCGGCGAAGAGCTCTCCTTCTCCCTCCCACCTCTCCCTAGCAGCGGCCGGCTGCGCCCTCTTGCCAGATATGGGGGTGGCGGCAGCGGCGGGGAAGGGATGGCAACCGGCTGCGGTGGCGGGCGACGAGTCCGGCAGCAAGCTCCCCTTCTCCCTCCCACCTCTCCCCAGCGGCGGCCGGCTGCGCCCTCTTGCCAGATCTGGGGCAACAGCAGCGGCGGGGAAGGGGCGGCGGCTGGCTGCGGCAAAGGGCAACGATAGC GGCGGGGAAGGGACGGGGGCCGGCTG CGGTGGTGGGCGACGGGTCCGG CGGTGGGCTCTCCTTCTCCCTCTCCCTCCTCCGCTG CCGCTAGCTG CCG TCGCCACCACCGCCGTGGGCTGCCGCTAGC TA GGGGACGGCCGAATCCGGTCGCCGCGATGTCGGGGAGGCCGGATCCGCCGCCGCCGACGACCTGGGAGGCCGGATCCGCCGCCGCGACGACCTGGGAGGCCAGATCTG CCGCTGACGCCGACGGGGGCAGCGCCGCGACGACTTCAAATTTTTTTTCTGATGCTTGAATGCTTGGGTGAATGGAAATTTTTTAATGTAAATTGTTGATGTAATTTTCTGTTGATTTTTGAATGCGTGGTTA                           ]
[+] EMBL AU056976             [                                                                                                                                                                                                              CGGCGGCTGGCTGCGGCAAAGGGCGACGGTAGCGGCGGGGAAGGGTCGGCCGGCTACGGTGGCAGGCGATGAGTCCGGCGAAGAGCTCTCCTTCTCCCTCCCACCTCTCCCTAGCAGCGGCCGGCTGCGCCCTCTTGCCAGATATGGGGGTGGCGGCA CGGCGGGGAAGGGATGGCAACCGGCTGCGGTGGCGGGCGACGAGTCCGGCAGCAAGCTCCCCTTCTCCCTCCCACCTCTCCCCAGCGGCGGCCGGCTGCGCCCTCTTGCCAGATCTGGGGCAACAGCAGCGGCGGGGAAGGGGCGGCGGCTGGCTGCGGCAAAGGGCAACGATAGCGGGCGGGGAAGGGACGGGGGCCGGCTG CNGTGGTGGGCGACGGGTCCGGNCGGTGGGCTCTCCTTCTCCCTCTCCCTCNTCCGCTG CCGCTAGCTG CCGTTCGCCACCANCGCCGTGGGCTGCCGCTAGC TAGGGGGACGGCCGA                                                                                                                                                                                                                                                                 ]
[+] EMBL AU095644             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCAGCGGCGGGGAAGGGGCGGCGGCTGGCTGCGGCAAAGGGCAACGATAGC GGCGGGNAAGGGACGGGGGCCGGCTGCCGGTGGTGGGCGACGGGTCCGG CGGTGGGCTCTCCTTCTCCCTCTCCCTCCTNCCCTGCCCGCTAGCTGCCCG TCGCCACCACCGCCGTGGGCTGCCGCTAGCTTA GGGGACGGCCGAATCCGGTCGCCGCGATGTCGGGGAGGCCGGATCCGCCGCCGCCGACGACCTGGGAGGCCGGATCCGCCGCCGCGACGACCTGGGAGGCCAGATCTGNCCG TGACGCCGACGGGGGCAGCGCCGCGACGACTTCAAATTTTTTTTCTGATGCTTGAATGCTTGGGTGAATGGAAATTTTTTAATGTAAATTGTTGATGTAATTTTCTGTTGATTTTTGAATGCGTGGTTAAATTTCTGTGAAAAAAAAAAAAAAAAA]


>consensus_4819#0 CGGCTCCCCCACCCACCCATGTCTCCTTCCTCCTTCCTCCACCACCCACGTCTCCTTCCT CCTTCCTCCACTCCCTCCTTTCTCCCTCCTAGCCTTCTCCCTCCCACCTCTCCCCAGCGG CGGCCGGTTGTGGCAAACGGAGAAAGGTTGCGGCCGGCTGCGCCCTCTCGCCAGATATGG GGGCGACGGCAGTGGCGGGGAAGGGGCGGCGGCTGGCTGCGGCAAAGGGCGACGGTAGCG GCGGGGAAGGGTCGGCCGGCTACGGTGGCAGGCGATGAGTCCGGCGAAGAGCTCTCCTTC TCCCTCCCACCTCTCCCTAGCAGCGGCCGGCTGCGCCCTCTTGCCAGATATGGGGGTGGC GGCAGCGGCGGGGAAGGGATGGCAACCGGCTGCGGTGGCGGGCGACGAGTCCGGCAGCAA GCTCCCCTTCTCCCTCCCACCTCTCCCCAGCGGCGGCCGGCTGCGCCCTCTTGCCAGATC TGGGGCAACAGCAGCGGCGGGGAAGGGGCGGCGGCTGGCTGCGGCAAAGGGCAACGATAG CGGCGGGGAAGGGACGGGGGCCGGCTGCGGTGGTGGGCGACGGGTCCGGCGGTGGGCTCT CCTTCTCCCTCTCCCTCCTCCGCTGCCGCTAGCTGCCGTCGCCACCACCGCCGTGGGCTG CCGCTAGCTAGGGGACGGCCGAATCCGGTCGCCGCGATGTCGGGGAGGCCGGATCCGCCG CCGCCGACGACCTGGGAGGCCGGATCCGCCGCCGCGACGACCTGGGAGGCCAGATCTGCC GCTGACGCCGACGGGGGCAGCGCCGCGACGACTTCAAATTTTTTTTCTGATGCTTGAATG CTTGGGTGAATGGAAATTTTTTAATGTAAATTGTTGATGTAATTTTCTGTTGATTTTTGA ATGCGTGGTTAAATTTCTGTGAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)