cluster # 4821

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Oryza sativa
cluster # 4821 cluster # 4821 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4821#0 length = 883 sequences # 3

consensusID : consensus_4821#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 883
fasta sequence

                              [TTTTTTCTATCTTTTACAGCATGCATGTACTACTATATTAATCTCTTTGAAGACCAAATATTTTTCAAATGCACTAATACTAGTATAAGATTTCAATAACGTGTAATGCAAATTATCATGGTATTATTATATATAATTTGTTATGGCAGCAATGGCAGGCATTATGAACTGAACCTACCACTAGTTAATGCATAAATATGCATTATGATATTTTTTGCATTATTAACTTTAGTACGTGTATGTTAAGTTAATGTCATGTNTATGGTTGTTCTATTTAAATATATATACTAGGAAACTAGAATGTGTTCATATGGATTTAATTACCTCTAAAAGGACAAACTATTATTAACTATGTACTTATATTTGCAAAACGTTAAATTTCCGTCATATTCCGACTAATCATCCGTATTCCGATTAATCGTTTGGCAGTACTCTCCCCGTCCGACATCCGTATTTCGTCTTCCATAACACTGTGTGCCACTTGATTCAAACGCTCCCAATTTCACGGTTGACCCCCATCCCGTCTTCGCAGTTTCTCGCCGTAGGCCGCAATGCTTCGCCGTCTCTCGAAAAGCTGCATGCTGCATGGAATCGTAGTGCGACACATGGGCAATGCCCTCGCTGGCTGGGAATTGTGCGCTCTTGGCCAGGAATCGTCGCCGCCACTGCCAGCCACCAGCCATCAACATCGAACCTGACACATGGGCCCTATCAGTCAGTCACCCACCCTCCTAGGGTCTCCTCCTTTGTCAGGCCCATGAGGCTACTACGCGGTGCCCCTGTTCCCCAGCACAGAGCTTTGAGTGGCGGCGACAACCAAAAAGGACTGAACGCGAAGAAG-ATGATGCCACACGGAGCTTCCCGTCGCTATCACCATCGAGCT]

[+] EMBL CF297837             [TTTTTTCTATCTTTTACAGCATGCATGTACTACTATATTAATCTCTTTGAAGACCAAATATTTTTCAAATGCACTAATACTAGTATAAGATTTCAATAACGTGTAATGCAAATTATCATGGTATTATTATATATAATTTGTTATGGCAGCAATGGCAGGCATTATGAACTGAACCTACCACTAGTTAATGCATAAATATGCATTATGATATTTTTTGCATTATTAACTTTAGTACGTGTATGTTAAGTTAATGTCATGTNTATGGTTGTTCTATTTAAATATATATACTAGGAAACTAGAATGTGTTCATATGGATTTAATTACCTCTAAAAGGACAAACTATTATTAACTATGTACTTATATTTGCAAAACGTTAAATTTCCGTCATATTCCGACTAATCATCCGTATTCCGATTAATCGTTTGGCAGTACTCTCCCCGTCCGACATCCGTATTTCGTCTTCCATAACACTGTGTGCCACTTGATTCA                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF279563             [                                                                                                                                                                                                                                                                                   ttttttttTATACTAGGAAAATATACTGTGTTCATATGGATTTAATTACCTCTAAAAGGACAAACTATTATTAACTATGTACTTATATTTGCAAAACGTTAAATTTCCGTCATATTCCGACTAATCATCCGTATTCCGATTAATCGTTTGGCTTTTCTTTTCCCGTCCGACATCCGTTTTTCGTCTTCCATAACACTGGGGTCCATTTGATTCAAACGCTCCCAATTTCACGGTTGACCCCCATCCCGTCTTCGCAGTTTCTCGCCGTAGGCCGCAATGCTTCGCCGTCTCTCGAAAAGCTGCATGCTGCATGGAATCGTAGTGCGACACATGGGCAATGCCCTCGCTGGCTGGGAATTGTGCGCTCTTGGCCAGGAATCGTCGCCGCCACTGCCAGCCACCAGCCATCAACATCGAACCTGACACATGGGCCCTATCAGTCAGTCACCCACCCTCCTAGGGTCTCCTCCTTTGTCAGGCCCATGAGGCTACTACGCGGTGCCCCTGTTCCCCAGCACAGAGCTTTGAGTGGCGGCGACAACCAAAAAGGACTGAACGCGAAGAAG ATGATGCCACACGGAGCTTCCCGTCGCTATCACCATCGAGCT]
[-] EMBL OSC30301             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTCGAAAAGCTGCATGCTGCATGGAATCGTAGTGCGACACATGGGCAATGCCCTCGCTGGCTGGGAATTGTGCGCTCTTGGCCAGGAATCGTCGCCGCAACTGCCAGCCACCAGCCATCAACATCGAACCTGACACATGGGCCCTATCAGTCAGTCACCCACCCTCCTAGGGTCTCCTCCTTTGTCAGGCCCATGAGGCTACTACGCGGTGCCCCTGTTCCCCAGCACAGAGCTTTGAGTGGCGGCGACAACCAAAAAGGACTGAACGCGAAGAAGAATGATGCCACACGGAGCTTCCCGTCGCTATCACCA       ]




>consensus_4821#0
TTTTTTCTATCTTTTACAGCATGCATGTACTACTATATTAATCTCTTTGAAGACCAAATA
TTTTTCAAATGCACTAATACTAGTATAAGATTTCAATAACGTGTAATGCAAATTATCATG
GTATTATTATATATAATTTGTTATGGCAGCAATGGCAGGCATTATGAACTGAACCTACCA
CTAGTTAATGCATAAATATGCATTATGATATTTTTTGCATTATTAACTTTAGTACGTGTA
TGTTAAGTTAATGTCATGTNTATGGTTGTTCTATTTAAATATATATACTAGGAAACTAGA
ATGTGTTCATATGGATTTAATTACCTCTAAAAGGACAAACTATTATTAACTATGTACTTA
TATTTGCAAAACGTTAAATTTCCGTCATATTCCGACTAATCATCCGTATTCCGATTAATC
GTTTGGCAGTACTCTCCCCGTCCGACATCCGTATTTCGTCTTCCATAACACTGTGTGCCA
CTTGATTCAAACGCTCCCAATTTCACGGTTGACCCCCATCCCGTCTTCGCAGTTTCTCGC
CGTAGGCCGCAATGCTTCGCCGTCTCTCGAAAAGCTGCATGCTGCATGGAATCGTAGTGC
GACACATGGGCAATGCCCTCGCTGGCTGGGAATTGTGCGCTCTTGGCCAGGAATCGTCGC
CGCCACTGCCAGCCACCAGCCATCAACATCGAACCTGACACATGGGCCCTATCAGTCAGT
CACCCACCCTCCTAGGGTCTCCTCCTTTGTCAGGCCCATGAGGCTACTACGCGGTGCCCC
TGTTCCCCAGCACAGAGCTTTGAGTGGCGGCGACAACCAAAAAGGACTGAACGCGAAGAA
GATGATGCCACACGGAGCTTCCCGTCGCTATCACCATCGAGCT

clustalw multiple alignements is not computed in this case