Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4862 cluster # 4862       Sequences # 3       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4862#0 length = 2897 sequences # 1  
 consensus_4862#1 length = 2889 sequences # 1  
consensus_4862#2 length = 722 sequences # 1  
consensusID : consensus_4862#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2897
fasta sequence 
                              [AAAAGGAAAATCTCCCCTCCCGTCTCGTCGTCTCCTCCGCTCCTTGCGCCATCTCGCGGCCGAACAGGGGAGAGGAGGGGAGGGGATCCTGGTGAGGTCTCTGACGCGGAGCACATGGACGCGGAGATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCCCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGACTCCTCGTCGCCGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCCGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGCTGATCAAGTTCTTCCCTCCCCTTCTGCTTCGCCACCCGCCCCCATAATTAATTAATTAATCACGGAACCAAAAGATTTATTCTAGTTTAAGGTAGAGAAATGATAACATAAGAAGACAATAACAACACACACACACACACACAAAAATATAAGATAGAAGAGGAAGAGTTATTTTTCTCGGTTACAAACTCAAAGTTGCAGTTTAGAACTTGGTAAGTAGATGTTTCAGGCTGGTTGGTCAGTTAATGGTTTGAGTCCCCATGTCAGTACTGATCGATGTAAGCCTGACAAATTTTGGTAGGCTGATACTCTCCCTAGCCCTTCGCGTGACACATTCGAAGTGGAATGTGTCCAGTTTTCTGACGGGCTAGGTCCGCTATTTTGTCCTGGATACATATTCATTATTCATCATTGCCATTGGTAGTATATAATTTAAG]

[+] EMBL AK064367             [AAAAGGAAAATCTCCCCTCCCGTCTCGTCGTCTCCTCCGCTCCTTGCGCCATCTCGCGGCCGAACAGGGGAGAGGAGGGGAGGGGATCCTGGTGAGGTCTCTGACGCGGAGCACATGGACGCGGAGATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCCCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGACTCCTCGTCGCCGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCCGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGCTGATCAAGTTCTTCCCTCCCCTTCTGCTTCGCCACCCGCCCCCATAATTAATTAATTAATCACGGAACCAAAAGATTTATTCTAGTTTAAGGTAGAGAAATGATAACATAAGAAGACAATAACAACACACACACACACACACAAAAATATAAGATAGAAGAGGAAGAGTTATTTTTCTCGGTTACAAACTCAAAGTTGCAGTTTAGAACTTGGTAAGTAGATGTTTCAGGCTGGTTGGTCAGTTAATGGTTTGAGTCCCCATGTCAGTACTGATCGATGTAAGCCTGACAAATTTTGGTAGGCTGATACTCTCCCTAGCCCTTCGCGTGACACATTCGAAGTGGAATGTGTCCAGTTTTCTGACGGGCTAGGTCCGCTATTTTGTCCTGGATACATATTCATTATTCATCATTGCCATTGGTAGTATATAATTTAAG]




>consensus_4862#0
AAAAGGAAAATCTCCCCTCCCGTCTCGTCGTCTCCTCCGCTCCTTGCGCCATCTCGCGGC
CGAACAGGGGAGAGGAGGGGAGGGGATCCTGGTGAGGTCTCTGACGCGGAGCACATGGAC
GCGGAGATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCA
CAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGAT
GATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGC
CTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAG
AAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGC
TACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTC
TCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGC
AACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTG
ATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCCCTATGACTTCTCCGCGTCGTCA
CCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCA
GCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGC
CGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTC
GATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGA
CTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGG
AAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCC
AAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGC
GACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGC
CTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCT
CTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAG
CACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCG
GATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCT
GGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCC
GCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGAT
GGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACA
AAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGAAG
GCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGATAAATACAAGCTTGTGCTG
GAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTG
AAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTG
GAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGT
GGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACG
GCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATG
GCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCC
GGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCG
CCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCG
TTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCC
AAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCT
GGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGACTCC
TCGTCGCCGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGA
GACTGCCGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGC
TGATCAAGTTCTTCCCTCCCCTTCTGCTTCGCCACCCGCCCCCATAATTAATTAATTAAT
CACGGAACCAAAAGATTTATTCTAGTTTAAGGTAGAGAAATGATAACATAAGAAGACAAT
AACAACACACACACACACACACAAAAATATAAGATAGAAGAGGAAGAGTTATTTTTCTCG
GTTACAAACTCAAAGTTGCAGTTTAGAACTTGGTAAGTAGATGTTTCAGGCTGGTTGGTC
AGTTAATGGTTTGAGTCCCCATGTCAGTACTGATCGATGTAAGCCTGACAAATTTTGGTA
GGCTGATACTCTCCCTAGCCCTTCGCGTGACACATTCGAAGTGGAATGTGTCCAGTTTTC
TGACGGGCTAGGTCCGCTATTTTGTCCTGGATACATATTCATTATTCATCATTGCCATTG
GTAGTATATAATTTAAG

consensusID : consensus_4862#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2889
fasta sequence 
                              [CTCCGCTCCTTGCGCCATCTCGCGGCCGAACAGGGGAGAGGAGGGGAGGGGATCCTGGTGAGGTCTCTGACGCGGAGCACATGGACGCGGAGATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCTCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGACATGTATGAGCATCTGGTTCAGAAAAAGGGTAAGCTGAAGAAGGAGGTGCTGTCCTTGAAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGACTCCTCGTCGCGGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCGGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGCTGATCAAGTTCTTCCCTCCCCTTCTGCTTCGCCACCCGCCCCCATAATTAATTAATTAATCACGGAACCAAAAGATTTATTCTAGTTTAAGGTAGAGAAATGATAACATAAGAAGACAATAACAACACACACACACACACACAAAAATATAAGATAGAAGAGGAAGAGTTATTTTTCTCGGTTACAAACTCAAAGTTGCAGTTTAGAACTTGGTAAGTAGATGTTTCAGGCTGGTTGGTCAGTTAATGGTTTGAGTCCCCATGTCTGTACTGATCGATGTAAGCCTGACAAATTTTGGTAGGCTGATACTCTCCCTAGCCCTTCGCGTGACACATTCGAAGTGGAATGTGTCCAGTTTTCTGACGGGCTAGGTCCGCTATTTTGTCCTGGATACATATTC]

[+] EMBL AK101644             [CTCCGCTCCTTGCGCCATCTCGCGGCCGAACAGGGGAGAGGAGGGGAGGGGATCCTGGTGAGGTCTCTGACGCGGAGCACATGGACGCGGAGATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCTCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGACATGTATGAGCATCTGGTTCAGAAAAAGGGTAAGCTGAAGAAGGAGGTGCTGTCCTTGAAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGACTCCTCGTCGCGGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCGGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGCTGATCAAGTTCTTCCCTCCCCTTCTGCTTCGCCACCCGCCCCCATAATTAATTAATTAATCACGGAACCAAAAGATTTATTCTAGTTTAAGGTAGAGAAATGATAACATAAGAAGACAATAACAACACACACACACACACACAAAAATATAAGATAGAAGAGGAAGAGTTATTTTTCTCGGTTACAAACTCAAAGTTGCAGTTTAGAACTTGGTAAGTAGATGTTTCAGGCTGGTTGGTCAGTTAATGGTTTGAGTCCCCATGTCTGTACTGATCGATGTAAGCCTGACAAATTTTGGTAGGCTGATACTCTCCCTAGCCCTTCGCGTGACACATTCGAAGTGGAATGTGTCCAGTTTTCTGACGGGCTAGGTCCGCTATTTTGTCCTGGATACATATTC]




>consensus_4862#1
CTCCGCTCCTTGCGCCATCTCGCGGCCGAACAGGGGAGAGGAGGGGAGGGGATCCTGGTG
AGGTCTCTGACGCGGAGCACATGGACGCGGAGATGGCGGCTCCTGCGCTTGCGGCAGCTC
ATCTGCTGGACTCGCCCATGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTA
GCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCAC
CCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCG
GAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGT
CCATACGCGTGGTAAAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGT
CCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGC
TCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGG
CCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCT
GCCTCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTG
CCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCG
ACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTT
CCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGG
AGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACA
ACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGA
GCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGA
GGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCG
AGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCT
TCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACA
CCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGG
ACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGG
AGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTG
GGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGG
TGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTA
ATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGA
AGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTA
TGAAGGACATGTATGAGCATCTGGTTCAGAAAAAGGGTAAGCTGAAGAAGGAGGTGCTGT
CCTTGAAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGG
CTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAG
ATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTG
TTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCA
CCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGC
CACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGG
GAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCT
GCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGG
TCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGG
CATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCAC
CTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCT
CCGGCCTCACCTTACGCCATGTGGACTCCTCGTCGCGGTCGTCCGCGCCATGCGGTGCTA
GGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCGGGGGGATCAGCGTCGTGGGCACCG
AGCTGGCACTGGCCACTCCGTCCTACTGCTGATCAAGTTCTTCCCTCCCCTTCTGCTTCG
CCACCCGCCCCCATAATTAATTAATTAATCACGGAACCAAAAGATTTATTCTAGTTTAAG
GTAGAGAAATGATAACATAAGAAGACAATAACAACACACACACACACACACAAAAATATA
AGATAGAAGAGGAAGAGTTATTTTTCTCGGTTACAAACTCAAAGTTGCAGTTTAGAACTT
GGTAAGTAGATGTTTCAGGCTGGTTGGTCAGTTAATGGTTTGAGTCCCCATGTCTGTACT
GATCGATGTAAGCCTGACAAATTTTGGTAGGCTGATACTCTCCCTAGCCCTTCGCGTGAC
ACATTCGAAGTGGAATGTGTCCAGTTTTCTGACGGGCTAGGTCCGCTATTTTGTCCTGGA
TACATATTC

consensusID : consensus_4862#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 722
fasta sequence 
                              [CNCGGTGNCGGCCCGCTTTTTTTTTTTTTTTTTTTTTTTTANCCTCATGGAGTGATAGAGTTAGCAATAATGANCTTTAGTTCCTATATATGTTTAAGGTTCCATATACTTGCATGCATGTGCAATTTACTGACACTAGTGCTGTTAAGTTCAGTTAACATCAGCAGCTAATTAGTCTGGGCAGTGTCACAGAAAAAAAAATCTTAAAGCAATACTAGATCACAGACTCACAGCTAGTAATTCGGTTCACACATATGGATCACTTTGTCAGGAAATCATGCATGCACAGAAAAATTGCTCCCCTGTGTTTATTTTGCTTCTAGGTACAGTACAGAGTGGTACGTGATGTTAATTGGTGTCTCTCTTCCACAAGGCTAGAGGTTTAATTCCATCTCACGCACGCTGCACGCGCACCCTCTATCCCAAGCTTTCCCGTTTCAGTATCTCTGATCGCTCACTGCACCTGCATTACACGAGCCAAAACGCCTGACCTGTGCTTTGCATGTGTTGTGTTGGCCCATTTCCAAGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCC]

[-] EMBL CA765986             [CNCGGTGNCGGCCCGCTTTTTTTTTTTTTTTTTTTTTTTTANCCTCATGGAGTGATAGAGTTAGCAATAATGANCTTTAGTTCCTATATATGTTTAAGGTTCCATATACTTGCATGCATGTGCAATTTACTGACACTAGTGCTGTTAAGTTCAGTTAACATCAGCAGCTAATTAGTCTGGGCAGTGTCACAGAAAAAAAAATCTTAAAGCAATACTAGATCACAGACTCACAGCTAGTAATTCGGTTCACACATATGGATCACTTTGTCAGGAAATCATGCATGCACAGAAAAATTGCTCCCCTGTGTTTATTTTGCTTCTAGGTACAGTACAGAGTGGTACGTGATGTTAATTGGTGTCTCTCTTCCACAAGGCTAGAGGTTTAATTCCATCTCACGCACGCTGCACGCGCACCCTCTATCCCAAGCTTTCCCGTTTCAGTATCTCTGATCGCTCACTGCACCTGCATTACACGAGCCAAAACGCCTGACCTGTGCTTTGCATGTGTTGTGTTGGCCCATTTCCAAGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCC]




>consensus_4862#2
CNCGGTGNCGGCCCGCTTTTTTTTTTTTTTTTTTTTTTTTANCCTCATGGAGTGATAGAG
TTAGCAATAATGANCTTTAGTTCCTATATATGTTTAAGGTTCCATATACTTGCATGCATG
TGCAATTTACTGACACTAGTGCTGTTAAGTTCAGTTAACATCAGCAGCTAATTAGTCTGG
GCAGTGTCACAGAAAAAAAAATCTTAAAGCAATACTAGATCACAGACTCACAGCTAGTAA
TTCGGTTCACACATATGGATCACTTTGTCAGGAAATCATGCATGCACAGAAAAATTGCTC
CCCTGTGTTTATTTTGCTTCTAGGTACAGTACAGAGTGGTACGTGATGTTAATTGGTGTC
TCTCTTCCACAAGGCTAGAGGTTTAATTCCATCTCACGCACGCTGCACGCGCACCCTCTA
TCCCAAGCTTTCCCGTTTCAGTATCTCTGATCGCTCACTGCACCTGCATTACACGAGCCA
AAACGCCTGACCTGTGCTTTGCATGTGTTGTGTTGGCCCATTTCCAAGAGGCCACAGGTG
AGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCC
AACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCC
TCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTT
CC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4862#0      AAAAGGAAAATCTCCCCTCCCGTCTCGTCGTCTCCTCCGCTCCTTGCGCCATCTCGCGGC 60
consensus_4862#1      ----------------------------------CTCCGCTCCTTGCGCCATCTCGCGGC 26
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CGAACAGGGGAGAGGAGGGGAGGGGATCCTGGTGAGGTCTCTGACGCGGAGCACATGGAC 120
consensus_4862#1      CGAACAGGGGAGAGGAGGGGAGGGGATCCTGGTGAGGTCTCTGACGCGGAGCACATGGAC 86
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      GCGGAGATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCA 180
consensus_4862#1      GCGGAGATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCA 146
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGAT 240
consensus_4862#1      CAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGAT 206
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      GATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGC 300
consensus_4862#1      GATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGC 266
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAG 360
consensus_4862#1      CTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAG 326
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      AAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGC 420
consensus_4862#1      AAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGC 386
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTC 480
consensus_4862#1      TACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTC 446
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGC 540
consensus_4862#1      TCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGC 506
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      AACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTG 600
consensus_4862#1      AACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTG 566
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      ATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCCCTATGACTTCTCCGCGTCGTCA 660
consensus_4862#1      ATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCTCTATGACTTCTCCGCGTCGTCA 626
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCA 720
consensus_4862#1      CCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCA 686
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      GCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGC 780
consensus_4862#1      GCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGC 746
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTC 840
consensus_4862#1      CGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTC 806
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      GATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGA 900
consensus_4862#1      GATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGA 866
consensus_4862#2      ----------------------------CNCGGTGNCGGC--CCGCTTTTTTTTTTTTTT 30
                                                      *   * **  * **   *     **   

consensus_4862#0      CTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGG 960
consensus_4862#1      CTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGG 926
consensus_4862#2      TTTTTTTTTTANCCTCATGGAGTG-ATAGAGTTAGCAATAATGANCTTTAGTTCCTATAT 89
                       *    **    *  *   * * * *   **  * *** *         *   *      

consensus_4862#0      AAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCC 1020
consensus_4862#1      AAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCC 986
consensus_4862#2      ATGTTTAAGGTTCCATATACTTGCATG--CATGTGCA-ATTTACTGACACTAGTGCTGTT 146
                      * *    ***   ** * *   *****  ** * *** *    *    *  *     *  

consensus_4862#0      AAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGC 1080
consensus_4862#1      AAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGC 1046
consensus_4862#2      AAGTTCAGTTAACATCAGCAGCTAATTAGTCTGGGCAGTGTCACAGAAAAAAAAATCTTA 206
                      ***       *   **   **    *      * *  * ***   **    ***  *   

consensus_4862#0      GACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGC 1140
consensus_4862#1      GACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGC 1106
consensus_4862#2      AAGCAATACTAGATCACAGACTCACAGCTAGTAATTCGGTTCACACATATGGATCACTTT 266
                       * *          **  ***     *   *     **** * **     ***       

consensus_4862#0      CTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGC-AGGC 1199
consensus_4862#1      CTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGC-AGGC 1165
consensus_4862#2      GT-CAGGAAATCATGCATGCACAGAAAAATTGCTCCCCTGTGTTTATTTTGCTTCTAGGT 325
                       * * *** ** ****   * **       **** *  ** *    *  ***  * *** 

consensus_4862#0      TCTGCGGGAGGAAGCCCGCAA-GCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCA 1258
consensus_4862#1      TCTGCGGGAGGAAGCCCGCAA-GCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCA 1224
consensus_4862#2      ACAGTACAGAGTGGTACGTGATGTTAATTGGTGTCTCTCTTCCACAAGGCTAGAGGTTTA 385
                       * *      *  *  **  * *   ** **** * *    *  *  * * *   * * *

consensus_4862#0      AGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATG 1318
consensus_4862#1      AGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATG 1284
consensus_4862#2      ATTCCATCTCACGCACGCTGC---------ACGCGCACC--CTCTATCCCAAGCTTTCCC 434
                      *   ***  *  *** * * *          **** ***   **  ** *  **      

consensus_4862#0      CGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGG 1378
consensus_4862#1      CGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGG 1344
consensus_4862#2      GTTTCAGTATCTCTGATCGCTCACTG----CACCTGCATTACACGAGCCAAAACGCCTGA 490
                            **  *   **   **  ***    *  * *   *   ****  *   ** *** 

consensus_4862#0      CTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGT 1438
consensus_4862#1      CTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGT 1404
consensus_4862#2      CCTGTGCTTTGCATGTGTTGTGTTGGCCCATTTCCAAGAGGCCAC-AGGTGAGCAGATA- 548
                      *  * *  *   **   *  **   ***     *   * **   * ******  *  *  

consensus_4862#0      CCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTG 1498
consensus_4862#1      CCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTG 1464
consensus_4862#2      CTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGAT-GATGCCAACCATG 607
                      *  *        * *   *    * **      *  *** *  * * * **   *   **

consensus_4862#0      ATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAA 1558
consensus_4862#1      ATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAA 1524
consensus_4862#2      ACGA-GTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTC-ATC 665
                      * *  **  **   *  ***   * ***     ** *   *    ***  *      *  

consensus_4862#0      CAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGA 1618
consensus_4862#1      CAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGA 1584
consensus_4862#2      TGCCACCCACACCTACCACACCGGAGGGTTCTACGA-GATCGACCACGAGAAGCTTCC-- 722
                          * *     *      * *  *  * **** ** *    *  *  ***** *     

consensus_4862#0      AGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGA----------------- 1661
consensus_4862#1      AGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGACATGTATGAGCATCTGG 1644
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      ----------------------------------------------TAAATACAAGCTTG 1675
consensus_4862#1      TTCAGAAAAAGGGTAAGCTGAAGAAGGAGGTGCTGTCCTTGAAGGATAAATACAAGCTTG 1704
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTT 1735
consensus_4862#1      TGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTT 1764
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAA 1795
consensus_4862#1      CTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAA 1824
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      GGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTG 1855
consensus_4862#1      GGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTG 1884
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      ATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGA 1915
consensus_4862#1      ATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGA 1944
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      GGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCAC 1975
consensus_4862#1      GGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCAC 2004
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      ACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCG 2035
consensus_4862#1      ACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCG 2064
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCC 2095
consensus_4862#1      CCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCC 2124
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACG 2155
consensus_4862#1      TCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACG 2184
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTG 2215
consensus_4862#1      TGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTG 2244
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCG 2275
consensus_4862#1      CCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCG 2304
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGG 2335
consensus_4862#1      CCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGG 2364
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      ACTCCTCGTCGCCGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCG 2395
consensus_4862#1      ACTCCTCGTCGCGGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCG 2424
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      ATGGAGACTGCCGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCT 2455
consensus_4862#1      ATGGAGACTGCGGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCT 2484
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      ACTGCTGATCAAGTTCTTCCCTCCCCTTCTGCTTCGCCACCCGCCCCCATAATTAATTAA 2515
consensus_4862#1      ACTGCTGATCAAGTTCTTCCCTCCCCTTCTGCTTCGCCACCCGCCCCCATAATTAATTAA 2544
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TTAATCACGGAACCAAAAGATTTATTCTAGTTTAAGGTAGAGAAATGATAACATAAGAAG 2575
consensus_4862#1      TTAATCACGGAACCAAAAGATTTATTCTAGTTTAAGGTAGAGAAATGATAACATAAGAAG 2604
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      ACAATAACAACACACACACACACACACAAAAATATAAGATAGAAGAGGAAGAGTTATTTT 2635
consensus_4862#1      ACAATAACAACACACACACACACACACAAAAATATAAGATAGAAGAGGAAGAGTTATTTT 2664
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TCTCGGTTACAAACTCAAAGTTGCAGTTTAGAACTTGGTAAGTAGATGTTTCAGGCTGGT 2695
consensus_4862#1      TCTCGGTTACAAACTCAAAGTTGCAGTTTAGAACTTGGTAAGTAGATGTTTCAGGCTGGT 2724
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TGGTCAGTTAATGGTTTGAGTCCCCATGTCAGTACTGATCGATGTAAGCCTGACAAATTT 2755
consensus_4862#1      TGGTCAGTTAATGGTTTGAGTCCCCATGTCTGTACTGATCGATGTAAGCCTGACAAATTT 2784
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TGGTAGGCTGATACTCTCCCTAGCCCTTCGCGTGACACATTCGAAGTGGAATGTGTCCAG 2815
consensus_4862#1      TGGTAGGCTGATACTCTCCCTAGCCCTTCGCGTGACACATTCGAAGTGGAATGTGTCCAG 2844
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      TTTTCTGACGGGCTAGGTCCGCTATTTTGTCCTGGATACATATTCATTATTCATCATTGC 2875
consensus_4862#1      TTTTCTGACGGGCTAGGTCCGCTATTTTGTCCTGGATACATATTC--------------- 2889
consensus_4862#2      ------------------------------------------------------------
                                                                                  

consensus_4862#0      CATTGGTAGTATATAATTTAAG 2897
consensus_4862#1      ----------------------
consensus_4862#2      ----------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)