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Oryza sativa
cluster # 4864 cluster # 4864       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4864#0 length = 1719 sequences # 3  

consensusID : consensus_4864#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1719
fasta sequence
                              [GAAGCAAGTAATTCAGGAGTAAGAGAAAAATACCGCCTGGTTGAGTTAAATTTACTTTGGAATAGCAACTTGAAAAGTAGAAGCAGTGACGTAGAAATAAGTGTTCTTGAGGGTCTTCAACCCCATCCAAATCTCAGACATCTCAGGATAATAAATTATAGAGGCTCTACATCACCAACATGGCTAGCTACGGATTTACATACCAAATACTTGGAGTCCCTCTACCTACATGATTGCTCCGGATGGGAAATGCTTCCTCCTCTTGGACAGCTTCCTTATCTAAGGAGACTTCATTTCACTGGTATGGGTTCCATCCTAAGCATAGGTCCTGAACTCTATGGAAGTGGCTCTTTAATGGGTTTCCCTTGTTTAGAAGAGTTGCATTTTGAGAACATGCTAGAGTGGCGATCATGGTGTGGGGTTGAGAAAGAATGCTTCTTTCCTAAATTGCTGACATTGACCATCATGGACTGTCCCAGCTTGCAGATGCTACCTGTTGAGCAATGGTCTGACCAAGTCAACTACAAATGGTTCCCTTGCCTTGAAATGCTTGACATCCAAAACTGTCCTAGCCTGGATCAATTGCCTCCTCTTCCACATTCTTCAACGTTGTCAAGGATAAGTTTGAAAAATGCAGGGATAATCTCTCTCATGGAGTTGAATGATGAAGAGATTGTAATTTCTGGCATATCTGATTTGGTGCTGGAAAGACAATTATTTCTGCCATTTCATAACTTGAGGAGCCTCAAGAGTTTCGGCATACCAGGTTGTGATAATTTCATGGTACTACCATTGAAAGGCCAGGGAAAGCATGATATTTCTGAGGTATCGACGACTATGGATGATTCTGGATCCTCACTGTCTAACATCAGTGAACTCAAGATATGCGGTTCTGGGATATCTGAGGATGTACTACATGAAATTTTATCAAATGTTGGCATTCTTGACTGCTTGTCAATAAAGGACTGCCCCCAGGTTACTTCCCTTGAGCTGAACCCAATGGTAAGACTGGATTACCTGATTATAGAAGATTGCCTAGAGCTCACGACATTGAAATGTATGAAAACTCTCATCCATCTAACAGAACTGACTGTGCTAAGAAGTCCTAAGTTCATGGAGGGATGGAAAAATCTCGTCGAAGAGGCAGAGGGATCACATCTCAGAATTACTGCCTCACTGAAAAGACTGCATATTGATGATTTATCATTCCTTACCATGCCAATTTGTAGGACACTTGGGTATCTTCAATATTTGATGATTGACACGGATCAGCAAACCATATGCCTAACTCCAGAGCAGGAGCAAGCATTTGGTACACTGACTTCATTGAAAACACTCGTGTTCAGTGAATGCTCATATCTCCGCTCATTGCC-TGCAACGCTGCACCAGATTTCCT-CCCTGAAGA-GCCTGC-ATTTATCATCGTGTGAGAGCATAGACTCCCTACCACACCTGGGATTGCCAGGATCACTGGAAAGGTTGTTCATTGCTGGATGTGACCTGTTGAGAGACAAGTGCGTAGAAGGTGGGATTGACCAGCACAAAATCGCACATGTCAGGGAAACAATTTTGGCATAGCATTGATTTCTCCAATGACCTCTAACAAATGTAGTGAGTAGTGACTACTGGTTTGATATGTTTACTTTCAGTAATAAAGCAACTCTATAATTTTTTTTCTGTGCTCATATTTACTAGGAGTATTTCAGGTTGCCAAAAAAAAAA]

[+] EMBL AK110770             [GAAGCAAGTAATTCAGGAGTAAGAGAAAAATACCGCCTGGTTGAGTTAAATTTACTTTGGAATAGCAACTTGAAAAGTAGAAGCAGTGACGTAGAAATAAGTGTTCTTGAGGGTCTTCAACCCCATCCAAATCTCAGACATCTCAGGATAATAAATTATAGAGGCTCTACATCACCAACATGGCTAGCTACGGATTTACATACCAAATACTTGGAGTCCCTCTACCTACATGATTGCTCCGGATGGGAAATGCTTCCTCCTCTTGGACAGCTTCCTTATCTAAGGAGACTTCATTTCACTGGTATGGGTTCCATCCTAAGCATAGGTCCTGAACTCTATGGAAGTGGCTCTTTAATGGGTTTCCCTTGTTTAGAAGAGTTGCATTTTGAGAACATGCTAGAGTGGCGATCATGGTGTGGGGTTGAGAAAGAATGCTTCTTTCCTAAATTGCTGACATTGACCATCATGGACTGTCCCAGCTTGCAGATGCTACCTGTTGAGCAATGGTCTGACCAAGTCAACTACAAATGGTTCCCTTGCCTTGAAATGCTTGACATCCAAAACTGTCCTAGCCTGGATCAATTGCCTCCTCTTCCACATTCTTCAACGTTGTCAAGGATAAGTTTGAAAAATGCAGGGATAATCTCTCTCATGGAGTTGAATGATGAAGAGATTGTAATTTCTGGCATATCTGATTTGGTGCTGGAAAGACAATTATTTCTGCCATTTCATAACTTGAGGAGCCTCAAGAGTTTCGGCATACCAGGTTGTGATAATTTCATGGTACTACCATTGAAAGGCCAGGGAAAGCATGATATTTCTGAGGTATCGACGACTATGGATGATTCTGGATCCTCACTGTCTAACATCAGTGAACTCAAGATATGCGGTTCTGGGATATCTGAGGATGTACTACATGAAATTTTATCAAATGTTGGCATTCTTGACTGCTTGTCAATAAAGGACTGCCCCCAGGTTACTTCCCTTGAGCTGAACCCAATGGTAAGACTGGATTACCTGATTATAGAAGATTGCCTAGAGCTCACGACATTGAAATGTATGAAAACTCTCATCCATCTAACAGAACTGACTGTGCTAAGAAGTCCTAAGTTCATGGAGGGATGGAAAAATCTCGTCGAAGAGGCAGAGGGATCACATCTCAGAATTACTGCCTCACTGAAAAGACTGCATATTGATGATTTATCATTCCTTACCATGCCAATTTGTAGGACACTTGGGTATCTTCAATATTTGATGATTGACACGGATCAGCAAACCATATGCCTAACTCCAGAGCAGGAGCAAGCATTTGGTACACTGACTTCATTGAAAACACTCGTGTTCAGTGAATGCTCATATCTCCGCTCATTGCC TGCAACGCTGCACCAGATTTCCT CCCTGAAGA GCCTGC ATTTATCATCGTGTGAGAGCATAGACTCCCTACCACACCTGGGATTGCCAGGATCACTAGAAAGGTTGTTCATCGCTGGATGTGACCTGTTGAGAGACAAGTGCGTAGAAGGTGGGATTGACCAGCACAAAATCGCACATGTCAGGGAAACAATTTTGGCATAGCATTGATTTCTCCAATGACCTCTAACAAATGTAGTGAGTAGTGACTACTGGTTTGATATGTTTACTTTCAGTAATAAAGCAACTCTATA                                                       ]
[+] EMBL CF330883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATGCCAATTTGTAGGACACTTGGGTATCTTCAATATTTGATGATTGACACGGATCAGCAAACCATATGCCTAACTCCAGAGCAGGAGCAAGCATTTGGTACACTGACTTCATTGAAAACACTCGTGTTCAGTGAATGCTCATATCTCCGCTCATTGCC TGCAACGCTGCACCAGATTTCCT CCCTGAAGA GCCTGC ATTTATCATCGTGTGAGAGCATAGACTCCCTACCACACCTGGGATTGCCAGGATCACTGGAAAGGTTGTTCATTGCCGGATGTGACCTGTTGAGAGACAAGTGCGTAGAAGGTGGGATTGACCAGCACAAAATCGCACATGTCAGGGAAACAATTTTGGCATAGCATTGATTTCTCCAATGACCTCTAACAAATGTAGTGAGTAGTGACTACTGGT                                                                                            ]
[+] EMBL BI813563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TACACTGACTTCATNGAAAACACTCGTGTTCAGTGAATGCTCATATCTCCGCTCATTGCCGTGCAACGCTGCACCAGATTTCCTCCCCTGAAGACGCCTGCAATTTATCATCGTGTGAGAGCATAGACTCCCTACCACACCTGGGATT CCAGGATCACTGGAAA GTTGTTCATTGCTGGATGTGACCTGTTGAGAGACAAGTGCGTAGAAGGTGGGATTGACCAGCAC AAATCGCACATGTCAGGGAAAC ATTTTGGCATA CCTGGATTTC CC ATGACCTCTAAC AATGTAGTGAGTAGTGACTACTGGTTTGATATGTTTAC TTCAGTAATAAA CCACTCTATAATTTTTTTTCTGTGCTCATATTTACTAGGAGTATTTCAGGTTGCCAAAAAAAAAA]


>consensus_4864#0 GAAGCAAGTAATTCAGGAGTAAGAGAAAAATACCGCCTGGTTGAGTTAAATTTACTTTGG AATAGCAACTTGAAAAGTAGAAGCAGTGACGTAGAAATAAGTGTTCTTGAGGGTCTTCAA CCCCATCCAAATCTCAGACATCTCAGGATAATAAATTATAGAGGCTCTACATCACCAACA TGGCTAGCTACGGATTTACATACCAAATACTTGGAGTCCCTCTACCTACATGATTGCTCC GGATGGGAAATGCTTCCTCCTCTTGGACAGCTTCCTTATCTAAGGAGACTTCATTTCACT GGTATGGGTTCCATCCTAAGCATAGGTCCTGAACTCTATGGAAGTGGCTCTTTAATGGGT TTCCCTTGTTTAGAAGAGTTGCATTTTGAGAACATGCTAGAGTGGCGATCATGGTGTGGG GTTGAGAAAGAATGCTTCTTTCCTAAATTGCTGACATTGACCATCATGGACTGTCCCAGC TTGCAGATGCTACCTGTTGAGCAATGGTCTGACCAAGTCAACTACAAATGGTTCCCTTGC CTTGAAATGCTTGACATCCAAAACTGTCCTAGCCTGGATCAATTGCCTCCTCTTCCACAT TCTTCAACGTTGTCAAGGATAAGTTTGAAAAATGCAGGGATAATCTCTCTCATGGAGTTG AATGATGAAGAGATTGTAATTTCTGGCATATCTGATTTGGTGCTGGAAAGACAATTATTT CTGCCATTTCATAACTTGAGGAGCCTCAAGAGTTTCGGCATACCAGGTTGTGATAATTTC ATGGTACTACCATTGAAAGGCCAGGGAAAGCATGATATTTCTGAGGTATCGACGACTATG GATGATTCTGGATCCTCACTGTCTAACATCAGTGAACTCAAGATATGCGGTTCTGGGATA TCTGAGGATGTACTACATGAAATTTTATCAAATGTTGGCATTCTTGACTGCTTGTCAATA AAGGACTGCCCCCAGGTTACTTCCCTTGAGCTGAACCCAATGGTAAGACTGGATTACCTG ATTATAGAAGATTGCCTAGAGCTCACGACATTGAAATGTATGAAAACTCTCATCCATCTA ACAGAACTGACTGTGCTAAGAAGTCCTAAGTTCATGGAGGGATGGAAAAATCTCGTCGAA GAGGCAGAGGGATCACATCTCAGAATTACTGCCTCACTGAAAAGACTGCATATTGATGAT TTATCATTCCTTACCATGCCAATTTGTAGGACACTTGGGTATCTTCAATATTTGATGATT GACACGGATCAGCAAACCATATGCCTAACTCCAGAGCAGGAGCAAGCATTTGGTACACTG ACTTCATTGAAAACACTCGTGTTCAGTGAATGCTCATATCTCCGCTCATTGCCTGCAACG CTGCACCAGATTTCCTCCCTGAAGAGCCTGCATTTATCATCGTGTGAGAGCATAGACTCC CTACCACACCTGGGATTGCCAGGATCACTGGAAAGGTTGTTCATTGCTGGATGTGACCTG TTGAGAGACAAGTGCGTAGAAGGTGGGATTGACCAGCACAAAATCGCACATGTCAGGGAA ACAATTTTGGCATAGCATTGATTTCTCCAATGACCTCTAACAAATGTAGTGAGTAGTGAC TACTGGTTTGATATGTTTACTTTCAGTAATAAAGCAACTCTATAATTTTTTTTCTGTGCT CATATTTACTAGGAGTATTTCAGGTTGCCAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)