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Oryza sativa
cluster # 4874 cluster # 4874       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4874#0 length = 2697 sequences # 1  
consensus_4874#1 length = 1102 sequences # 2  

consensusID : consensus_4874#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2697
fasta sequence
                              [TTTGCTGCGTCGCCGTACGTCGTCTCGCTCGCTCCTCCACATGGCCGAGGAGTCTCGGGAAGAAGGCGGCGGCGGCGGCGTCGTGGAGGACGGCGACGAAGCCGGTGGACGGCCGGGGAAGGACGGCGGCAGCGGCGGCGCCGGCAGGGGGAGAGATGGGAACAATGGCATCAGCACGTGGGAGATCGAGGAGATGGAGGATGAGGCAGGGCCGGCGTCGCTGGCTCCTCCTGCCGCCGCCGCCGCCGCCGACGTGTACGTGGCGGTGGGGAAGGGCGGGTCAAGCATGGAGGCGCTGTCGTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGTCTACCTCGTGCACGTCTTCCCCGTCGTCATCAGCATCCCCACCGGATTTGGTAAGATCACAATTGGGTCCCAGCAATCTTTGGTTGGAGATTGGCCTGCAGCATTGTTGAAATCAAGGTCAAGTTCTTGGACTAGCTTAGGGGGTGATTTGTCTTTGACTGAATTTTTCAAAGCTGGCATTGTCACAAGCTGTAGTTCCATTCTAGCTTTGTTGGCATCCTGCCGTCCTACGTTAGGCATATTTTGCCCCATCGCAAACCTTGCAGCAAAAAAGCTCTAGAGCTGATGTTGACTGCATGGAGAATTGGAGATAGAAACAATACCACCCATGTGGTGTTTGGTTTAGGTGTCCATGCTAATTCTAGAGTGATCAACTTTCCAAAAATTCTAGAATGATCACCAACCAAGGCATGTATGAATAGGAAGAGATATATATATCATGTCCACAAAAGTTTCACGTTAACAGATGTTACAAAAAATTCTAGGAAAAAAATTGAACATGTACTTCCAATAGTATTGCACGTATATATAAAGTATCAACTTCAAATTCATTACTCCCTCCGTTTTATAATATTATAAGTCGCTTAGAATTTTTCTTTCTAATACGAAATATATTTAAAATATAACAACATTCTAATAAAAATAAGCATATTATCAAAATATATTCAATGTTATATTTAATGAAAATGATTTGGAGTTATATATATTGCTAAATTTTTCTATAAACTTAGTCAAACATAAAAAGGTTTGACTAAAAAATCAAAGCGACTTATAATATGAAATAGAGAGAGTATATTTTAGCCATAATAGAAAAGGAAAAATATTATATATTTAAGAGTATAAATGTGTCAGAAATTTGTCCTTTTTTCTCTCTCTCTAAGTATAATGAATTTGAAGTTAGGTGTGATACTATTGGAAGTGCATGTACATTTTTTTTTAGAATTTTCGGTGATATTTATTAGTTAGTGTGCACGGGACACTTGTGTGTACCATGTTCGGATAGACAGAATAACCCTTTTTCAGAACAAGGGTAGTGGAAGCGAGCCTACAATTCTAGTTGATTCAGAGGAGTTACACCTAGTTCCTTCTCTATATGGGTAATTTTACCATCCATAAGAAAATACCGGGAGGTAATATATTTTCTAGTATAAAACCCGTTACCTTCAGCTATTAGATATTTTAGTATGAAATTTAGTACCTATGGCTACTTTCTCATCAAGGACCGTAAAATTTCTCTAGATAATGTAAGGGCTTGTTCTTTATGGGTGATGTATAGAATTAAGTGTATGGAAATTATTCGAGAATATAAATGAATGAATTAAATATTAAAATATTGAATTGTTGGTTTTCAAAAAGTTTTCTAAGAAATGCCCATAATTAAAGTTTTTACAAATAAAGTATGGTTTTGAAGCTTACGAAGTGTGCCGTATCATCTACAATCTGTAAGCTGGAAAGAACACGACCCTTATGCGAGAAAGAACTATATTTGTTTTTGTCGATGCATCTACAGTTAAGGGATAATGGCCCATCAGTGGTATATTTCTAAAACCCACGTTTAATTTTTCGATTTGACAAAACCAATTATAATTTGCTCGGTCAGGTACAAAAGTACATCCCATCACGAATTTTGCTTCATGTGATTCCGCATTAATTTTATTCTCTGTTCTCAACTCCATATACGTGGAGTATATTGGATGGCAAACAGTAGAGTAGACTAGTAGTTCGAGTGTTATAGGTCTCTGAGATGCCGGCGTGAGCAGGGCGAGTACTTTGTTACACTTCCACTGAAATGTGAACAGACCAGTACAGTGAGATTCCGTTCTCGTAGCTTTTTTTTTTTTCTTTGACACTCGCACAGCAATTCATCGTTGATTGCTGAATGATGCAGACAGGCCATTCTTTGGCATGGCCAGATAGGGGAGCTGAGAAGGACGACTGCCTAGAGCTTAGGAAAACCCAGGGCTTTCTGGTATATGCAGAGATATATACTGTTGTATAACTCTCATTTTAGGCTAGCTGAGCAATATAGATAACTCACCATACAGTAAAAAATGTTAAGAGCAAATCATCAGTACATAACTCTGAAGAAACCGTTCGGTTTTTCTGGAGGGATAGGGCGCGCAGGATCTATATTTAAAGTCTTTTCATTTGGACATCATAGTCACGGTTGAGTCTAGGATTTATGTTTCCTTCTAGCTTGAGTCGTTGTTAAATATTAGGCTGCGTTTAAATCCAGGGGTGAAAAGTTTTGGCGTGTCACATCAGATATACAGACACACATTTGAAGTATTAAACGTAGACTAATAACAAAACAAATTACAGATAAACTGCGAGATGAATTATTAAGCCTAATTATTC]

[+] EMBL AK068835             [TTTGCTGCGTCGCCGTACGTCGTCTCGCTCGCTCCTCCACATGGCCGAGGAGTCTCGGGAAGAAGGCGGCGGCGGCGGCGTCGTGGAGGACGGCGACGAAGCCGGTGGACGGCCGGGGAAGGACGGCGGCAGCGGCGGCGCCGGCAGGGGGAGAGATGGGAACAATGGCATCAGCACGTGGGAGATCGAGGAGATGGAGGATGAGGCAGGGCCGGCGTCGCTGGCTCCTCCTGCCGCCGCCGCCGCCGCCGACGTGTACGTGGCGGTGGGGAAGGGCGGGTCAAGCATGGAGGCGCTGTCGTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGTCTACCTCGTGCACGTCTTCCCCGTCGTCATCAGCATCCCCACCGGATTTGGTAAGATCACAATTGGGTCCCAGCAATCTTTGGTTGGAGATTGGCCTGCAGCATTGTTGAAATCAAGGTCAAGTTCTTGGACTAGCTTAGGGGGTGATTTGTCTTTGACTGAATTTTTCAAAGCTGGCATTGTCACAAGCTGTAGTTCCATTCTAGCTTTGTTGGCATCCTGCCGTCCTACGTTAGGCATATTTTGCCCCATCGCAAACCTTGCAGCAAAAAAGCTCTAGAGCTGATGTTGACTGCATGGAGAATTGGAGATAGAAACAATACCACCCATGTGGTGTTTGGTTTAGGTGTCCATGCTAATTCTAGAGTGATCAACTTTCCAAAAATTCTAGAATGATCACCAACCAAGGCATGTATGAATAGGAAGAGATATATATATCATGTCCACAAAAGTTTCACGTTAACAGATGTTACAAAAAATTCTAGGAAAAAAATTGAACATGTACTTCCAATAGTATTGCACGTATATATAAAGTATCAACTTCAAATTCATTACTCCCTCCGTTTTATAATATTATAAGTCGCTTAGAATTTTTCTTTCTAATACGAAATATATTTAAAATATAACAACATTCTAATAAAAATAAGCATATTATCAAAATATATTCAATGTTATATTTAATGAAAATGATTTGGAGTTATATATATTGCTAAATTTTTCTATAAACTTAGTCAAACATAAAAAGGTTTGACTAAAAAATCAAAGCGACTTATAATATGAAATAGAGAGAGTATATTTTAGCCATAATAGAAAAGGAAAAATATTATATATTTAAGAGTATAAATGTGTCAGAAATTTGTCCTTTTTTCTCTCTCTCTAAGTATAATGAATTTGAAGTTAGGTGTGATACTATTGGAAGTGCATGTACATTTTTTTTTAGAATTTTCGGTGATATTTATTAGTTAGTGTGCACGGGACACTTGTGTGTACCATGTTCGGATAGACAGAATAACCCTTTTTCAGAACAAGGGTAGTGGAAGCGAGCCTACAATTCTAGTTGATTCAGAGGAGTTACACCTAGTTCCTTCTCTATATGGGTAATTTTACCATCCATAAGAAAATACCGGGAGGTAATATATTTTCTAGTATAAAACCCGTTACCTTCAGCTATTAGATATTTTAGTATGAAATTTAGTACCTATGGCTACTTTCTCATCAAGGACCGTAAAATTTCTCTAGATAATGTAAGGGCTTGTTCTTTATGGGTGATGTATAGAATTAAGTGTATGGAAATTATTCGAGAATATAAATGAATGAATTAAATATTAAAATATTGAATTGTTGGTTTTCAAAAAGTTTTCTAAGAAATGCCCATAATTAAAGTTTTTACAAATAAAGTATGGTTTTGAAGCTTACGAAGTGTGCCGTATCATCTACAATCTGTAAGCTGGAAAGAACACGACCCTTATGCGAGAAAGAACTATATTTGTTTTTGTCGATGCATCTACAGTTAAGGGATAATGGCCCATCAGTGGTATATTTCTAAAACCCACGTTTAATTTTTCGATTTGACAAAACCAATTATAATTTGCTCGGTCAGGTACAAAAGTACATCCCATCACGAATTTTGCTTCATGTGATTCCGCATTAATTTTATTCTCTGTTCTCAACTCCATATACGTGGAGTATATTGGATGGCAAACAGTAGAGTAGACTAGTAGTTCGAGTGTTATAGGTCTCTGAGATGCCGGCGTGAGCAGGGCGAGTACTTTGTTACACTTCCACTGAAATGTGAACAGACCAGTACAGTGAGATTCCGTTCTCGTAGCTTTTTTTTTTTTCTTTGACACTCGCACAGCAATTCATCGTTGATTGCTGAATGATGCAGACAGGCCATTCTTTGGCATGGCCAGATAGGGGAGCTGAGAAGGACGACTGCCTAGAGCTTAGGAAAACCCAGGGCTTTCTGGTATATGCAGAGATATATACTGTTGTATAACTCTCATTTTAGGCTAGCTGAGCAATATAGATAACTCACCATACAGTAAAAAATGTTAAGAGCAAATCATCAGTACATAACTCTGAAGAAACCGTTCGGTTTTTCTGGAGGGATAGGGCGCGCAGGATCTATATTTAAAGTCTTTTCATTTGGACATCATAGTCACGGTTGAGTCTAGGATTTATGTTTCCTTCTAGCTTGAGTCGTTGTTAAATATTAGGCTGCGTTTAAATCCAGGGGTGAAAAGTTTTGGCGTGTCACATCAGATATACAGACACACATTTGAAGTATTAAACGTAGACTAATAACAAAACAAATTACAGATAAACTGCGAGATGAATTATTAAGCCTAATTATTC]


>consensus_4874#0 TTTGCTGCGTCGCCGTACGTCGTCTCGCTCGCTCCTCCACATGGCCGAGGAGTCTCGGGA AGAAGGCGGCGGCGGCGGCGTCGTGGAGGACGGCGACGAAGCCGGTGGACGGCCGGGGAA GGACGGCGGCAGCGGCGGCGCCGGCAGGGGGAGAGATGGGAACAATGGCATCAGCACGTG GGAGATCGAGGAGATGGAGGATGAGGCAGGGCCGGCGTCGCTGGCTCCTCCTGCCGCCGC CGCCGCCGCCGACGTGTACGTGGCGGTGGGGAAGGGCGGGTCAAGCATGGAGGCGCTGTC GTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGTCTACCTCGTGCACGTCTTCCC CGTCGTCATCAGCATCCCCACCGGATTTGGTAAGATCACAATTGGGTCCCAGCAATCTTT GGTTGGAGATTGGCCTGCAGCATTGTTGAAATCAAGGTCAAGTTCTTGGACTAGCTTAGG GGGTGATTTGTCTTTGACTGAATTTTTCAAAGCTGGCATTGTCACAAGCTGTAGTTCCAT TCTAGCTTTGTTGGCATCCTGCCGTCCTACGTTAGGCATATTTTGCCCCATCGCAAACCT TGCAGCAAAAAAGCTCTAGAGCTGATGTTGACTGCATGGAGAATTGGAGATAGAAACAAT ACCACCCATGTGGTGTTTGGTTTAGGTGTCCATGCTAATTCTAGAGTGATCAACTTTCCA AAAATTCTAGAATGATCACCAACCAAGGCATGTATGAATAGGAAGAGATATATATATCAT GTCCACAAAAGTTTCACGTTAACAGATGTTACAAAAAATTCTAGGAAAAAAATTGAACAT GTACTTCCAATAGTATTGCACGTATATATAAAGTATCAACTTCAAATTCATTACTCCCTC CGTTTTATAATATTATAAGTCGCTTAGAATTTTTCTTTCTAATACGAAATATATTTAAAA TATAACAACATTCTAATAAAAATAAGCATATTATCAAAATATATTCAATGTTATATTTAA TGAAAATGATTTGGAGTTATATATATTGCTAAATTTTTCTATAAACTTAGTCAAACATAA AAAGGTTTGACTAAAAAATCAAAGCGACTTATAATATGAAATAGAGAGAGTATATTTTAG CCATAATAGAAAAGGAAAAATATTATATATTTAAGAGTATAAATGTGTCAGAAATTTGTC CTTTTTTCTCTCTCTCTAAGTATAATGAATTTGAAGTTAGGTGTGATACTATTGGAAGTG CATGTACATTTTTTTTTAGAATTTTCGGTGATATTTATTAGTTAGTGTGCACGGGACACT TGTGTGTACCATGTTCGGATAGACAGAATAACCCTTTTTCAGAACAAGGGTAGTGGAAGC GAGCCTACAATTCTAGTTGATTCAGAGGAGTTACACCTAGTTCCTTCTCTATATGGGTAA TTTTACCATCCATAAGAAAATACCGGGAGGTAATATATTTTCTAGTATAAAACCCGTTAC CTTCAGCTATTAGATATTTTAGTATGAAATTTAGTACCTATGGCTACTTTCTCATCAAGG ACCGTAAAATTTCTCTAGATAATGTAAGGGCTTGTTCTTTATGGGTGATGTATAGAATTA AGTGTATGGAAATTATTCGAGAATATAAATGAATGAATTAAATATTAAAATATTGAATTG TTGGTTTTCAAAAAGTTTTCTAAGAAATGCCCATAATTAAAGTTTTTACAAATAAAGTAT GGTTTTGAAGCTTACGAAGTGTGCCGTATCATCTACAATCTGTAAGCTGGAAAGAACACG ACCCTTATGCGAGAAAGAACTATATTTGTTTTTGTCGATGCATCTACAGTTAAGGGATAA TGGCCCATCAGTGGTATATTTCTAAAACCCACGTTTAATTTTTCGATTTGACAAAACCAA TTATAATTTGCTCGGTCAGGTACAAAAGTACATCCCATCACGAATTTTGCTTCATGTGAT TCCGCATTAATTTTATTCTCTGTTCTCAACTCCATATACGTGGAGTATATTGGATGGCAA ACAGTAGAGTAGACTAGTAGTTCGAGTGTTATAGGTCTCTGAGATGCCGGCGTGAGCAGG GCGAGTACTTTGTTACACTTCCACTGAAATGTGAACAGACCAGTACAGTGAGATTCCGTT CTCGTAGCTTTTTTTTTTTTCTTTGACACTCGCACAGCAATTCATCGTTGATTGCTGAAT GATGCAGACAGGCCATTCTTTGGCATGGCCAGATAGGGGAGCTGAGAAGGACGACTGCCT AGAGCTTAGGAAAACCCAGGGCTTTCTGGTATATGCAGAGATATATACTGTTGTATAACT CTCATTTTAGGCTAGCTGAGCAATATAGATAACTCACCATACAGTAAAAAATGTTAAGAG CAAATCATCAGTACATAACTCTGAAGAAACCGTTCGGTTTTTCTGGAGGGATAGGGCGCG CAGGATCTATATTTAAAGTCTTTTCATTTGGACATCATAGTCACGGTTGAGTCTAGGATT TATGTTTCCTTCTAGCTTGAGTCGTTGTTAAATATTAGGCTGCGTTTAAATCCAGGGGTG AAAAGTTTTGGCGTGTCACATCAGATATACAGACACACATTTGAAGTATTAAACGTAGAC TAATAACAAAACAAATTACAGATAAACTGCGAGATGAATTATTAAGCCTAATTATTC



consensusID : consensus_4874#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1102
fasta sequence
                              [CCTCCCCTCCCTTCGTCTTCATTTGCTGCGTCGCCGTACGTCGTCTCGCTCGCTCCTCCACATGGCCGAGGAGTCTCGGGAAGAAGGCGGCGGCGGCGGCGTCGTGGAGGACGGCGACGAAGCCGGTGGACGGCCGGGGAAGGACGGCGGCAGCGGCGGCGCCGGCAGGGGGAGAGATGGGAACAATGGCATCAGCACGTGGGAGATCGAGGAGATGGAGGATGAGGCAGGGCCGGCGTCGCTGGCTCCTCCTGCCGCCGCCGCCGCCGCCGACGTGTACGTGGCGGTGGGGAAGGGCGGGTCAAGCATGGAGGCGCTGTCGTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGTCTACCTCGTGCACGTCTTCCCCGTCGTCATCAGCATCCCCACCGGATTAGGAATGATGCCCAAGAGCCAAGCAAGCCCAGAGCAGGTAGAAACTTACATGAACCAAGAGAGATCAAAGAGGCGTGTGATGCTACAAAAATATTTAGACCATTGCCGCAACTTTCAGGTTAATGTTGATGTGTACCTCATCGAGAGCGATCATGTTACCAATGCGATCCTCGAACTTATTCCGGTCTTTCATGTACAACAGCTAGTTCTGGGGGTTTCAAAATCCAAATTGCGGAAGTTCAAGAGAGGAAACACAATAGCAGGACAGGTTCAGAAGAACGCACCTCTATACTGTGAAGTCAAGATTGTCTGTGATGGCAAGGAGGTTACAACTGTGCCAACTGCTGATCCAACACCACCAATTTCACCTTCTCCTGTAAATAACAAGAGTAATTCTATCAGCCCAACGCCACTATCACCTGCACCAGATCATAACAATCGCGCTGTGGCTGATGATGACAAAAAGGAGACTAATCCCAATGAAAGGAATAAAATCACAAAATATTTGAAATGCTTCTCATTTTGATCTTATACTTTTATGGTTGCTGCTTCAGTCACTTTTGCAGATATAGAACACTGCACGCATAGCATCTTCAGACAACAAAAGCTTGTAAAAAAACACTTTCACCAATGTTGTGATCTTGAATTTCTTGATTCATTTGTACAGGAGATGATGGTTGTTATAAAAAAAAGA]

[+] EMBL CB657610             [CCTCCCCTCCCTTCGTCTTCATTTGCTGCGTCGCCGTACGTCGTCTCGCTCGCTCCTCCACATGGCCGAGGAGTCTCGGGAAGAAGGCGGCGGCGGCGGCGTCGTGGAGGACGGCGACGAAGCCGGTGGACGGCCGGGGAAGGACGGCGGCAGCGGCGGCGCCGGCAGGGGGAGAGATGGGAACAATGGCATCAGCACGTGGGAGATCGAGGAGATGGAGGATGAGGCAGGGCCGGCGTCGCTGGCTCCTCCTGCCGCCGCCGCCGCCGCCGACGTGTACGTGGCGGTGGGGAAGGGCGGGTCAAGCATGGAGGCGCTGTCGTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGTCTACCTCGTGCACGTCTTCCCCGTCGTCATCAGCATCCCCACCGGATTAGGAATGATGCCCAAGAGCCAAGCAAGCCCAGAGCAGGTAGAAACTTACATGAACCAAGAGAGATCAAAGAGGCGTGTGATGCTACAAAAATATTTAGACCATTGCCGCAACTTTCAGGTTAATGTTGATGTGTACCTCATCGAGAGCGATCATGTTACCAATGCGATCCTCGAACTTATTCCGGTCTTTCATGTACAACAGCTAGTTCTGGGGGTTTCAAAATCCAAATTGCGGAAGTTCAAGAGAGGAAACACAATAGCAGGACAGGTTCAGAAGAACGCACCTCTATACTGTGAAGTCAAGATTGTCTGTGATGGCAAGGAGGTTACAACTGTGCCAACTGCTGATCCAAC                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB657611             [                                                                                                                                                                                                                                                                                                                       AGGCGCTGTCGTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGTCTACCTCGTGCACGTCTTCCCCGTCGTCATCAGCATCCCCACCGGATTAGGAATGATGCCCAAGAGCCAAGCAAGCCCAGAGCAGGTAGAAACTTACATGAACCAAGAGAGATCAAAGAGGCGTGTGATGCTACAAAAATATTTAGACCATTGCCGCAACTTTCAGGTTAATGTTGATGTGTACCTCATCGAGAGCGATCATGTTACCAATGCGATCCTCGAACTTATTCCGGTCTTTCATGTACAACAGCTAGTTCTGGGGGTTTCAAAATCCAAATTGCGGAAGTTCAAGAGAGGAAACACAATAGCAGGACAGGTTCAGAAGAACGCACCTCTATACTGTGAAGTCAAGATTGTCTGTGATGGCAAGGAGGTTACAACTGTGCCAACTGCTGATCCAACACCACCAATTTCACCTTCTCCTGTAAATAACAAGAGTAATTCTATCAGCCCAACGCCACTATCACCTGCACCAGATCATAACAATCGCGCTGTGGCTGATGATGACAAAAAGGAGACTAATCCCAATGAAAGGAATAAAATCACAAAATATTTGAAATGCTTCTCATTTTGATCTTATACTTTTATGGTTGCTGCTTCAGTCACTTTTGCAGATATAGAACACTGCACGCATAGCATCTTCAGACAACAAAAGCTTGTAAAAAAACACTTTCACCAATGTTGTGATCTTGAATTTCTTGATTCATTTGTACAGGAGATGATGGTTGTTATAAAAAAAAGA]


>consensus_4874#1 CCTCCCCTCCCTTCGTCTTCATTTGCTGCGTCGCCGTACGTCGTCTCGCTCGCTCCTCCA CATGGCCGAGGAGTCTCGGGAAGAAGGCGGCGGCGGCGGCGTCGTGGAGGACGGCGACGA AGCCGGTGGACGGCCGGGGAAGGACGGCGGCAGCGGCGGCGCCGGCAGGGGGAGAGATGG GAACAATGGCATCAGCACGTGGGAGATCGAGGAGATGGAGGATGAGGCAGGGCCGGCGTC GCTGGCTCCTCCTGCCGCCGCCGCCGCCGCCGACGTGTACGTGGCGGTGGGGAAGGGCGG GTCAAGCATGGAGGCGCTGTCGTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGT CTACCTCGTGCACGTCTTCCCCGTCGTCATCAGCATCCCCACCGGATTAGGAATGATGCC CAAGAGCCAAGCAAGCCCAGAGCAGGTAGAAACTTACATGAACCAAGAGAGATCAAAGAG GCGTGTGATGCTACAAAAATATTTAGACCATTGCCGCAACTTTCAGGTTAATGTTGATGT GTACCTCATCGAGAGCGATCATGTTACCAATGCGATCCTCGAACTTATTCCGGTCTTTCA TGTACAACAGCTAGTTCTGGGGGTTTCAAAATCCAAATTGCGGAAGTTCAAGAGAGGAAA CACAATAGCAGGACAGGTTCAGAAGAACGCACCTCTATACTGTGAAGTCAAGATTGTCTG TGATGGCAAGGAGGTTACAACTGTGCCAACTGCTGATCCAACACCACCAATTTCACCTTC TCCTGTAAATAACAAGAGTAATTCTATCAGCCCAACGCCACTATCACCTGCACCAGATCA TAACAATCGCGCTGTGGCTGATGATGACAAAAAGGAGACTAATCCCAATGAAAGGAATAA AATCACAAAATATTTGAAATGCTTCTCATTTTGATCTTATACTTTTATGGTTGCTGCTTC AGTCACTTTTGCAGATATAGAACACTGCACGCATAGCATCTTCAGACAACAAAAGCTTGT AAAAAAACACTTTCACCAATGTTGTGATCTTGAATTTCTTGATTCATTTGTACAGGAGAT GATGGTTGTTATAAAAAAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4874#0      ---------------------TTTGCTGCGTCGCCGTACGTCGTCTCGCTCGCTCCTCCA 39
consensus_4874#1      CCTCCCCTCCCTTCGTCTTCATTTGCTGCGTCGCCGTACGTCGTCTCGCTCGCTCCTCCA 60
                                           ***************************************

consensus_4874#0      CATGGCCGAGGAGTCTCGGGAAGAAGGCGGCGGCGGCGGCGTCGTGGAGGACGGCGACGA 99
consensus_4874#1      CATGGCCGAGGAGTCTCGGGAAGAAGGCGGCGGCGGCGGCGTCGTGGAGGACGGCGACGA 120
                      ************************************************************

consensus_4874#0      AGCCGGTGGACGGCCGGGGAAGGACGGCGGCAGCGGCGGCGCCGGCAGGGGGAGAGATGG 159
consensus_4874#1      AGCCGGTGGACGGCCGGGGAAGGACGGCGGCAGCGGCGGCGCCGGCAGGGGGAGAGATGG 180
                      ************************************************************

consensus_4874#0      GAACAATGGCATCAGCACGTGGGAGATCGAGGAGATGGAGGATGAGGCAGGGCCGGCGTC 219
consensus_4874#1      GAACAATGGCATCAGCACGTGGGAGATCGAGGAGATGGAGGATGAGGCAGGGCCGGCGTC 240
                      ************************************************************

consensus_4874#0      GCTGGCTCCTCCTGCCGCCGCCGCCGCCGCCGACGTGTACGTGGCGGTGGGGAAGGGCGG 279
consensus_4874#1      GCTGGCTCCTCCTGCCGCCGCCGCCGCCGCCGACGTGTACGTGGCGGTGGGGAAGGGCGG 300
                      ************************************************************

consensus_4874#0      GTCAAGCATGGAGGCGCTGTCGTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGT 339
consensus_4874#1      GTCAAGCATGGAGGCGCTGTCGTGGGCGCTGCGGCGGCTGGCCTCGCCGCGGAGCTTCGT 360
                      ************************************************************

consensus_4874#0      CTACCTCGTGCACGTCTTCCCCGTCGTCATCAGCATCCCCACCGGATTTGGTAAGATCAC 399
consensus_4874#1      CTACCTCGTGCACGTCTTCCCCGTCGTCATCAGCATCCCCACCGGATTAGGAATGATGCC 420
                      ************************************************ ** * ***  *

consensus_4874#0      AATTGGGTCCCAGCAATCTTTGGTTGGAGATTGGCCTGCAGCATTGTTGAAATCAAGGTC 459
consensus_4874#1      CA--AGAGCCAAGCAAGCCCAGAGCAGGTAGAAACTTACA----TGAACCAAGAGAGATC 474
                       *   *  ** ***** *   *    *  *    * * **    **    **   ** **

consensus_4874#0      AAGTTCTTGGACTA-GCTTAGGGGGTGATTTGTCTTTGACTGAATTTTTCAAAGCTGGCA 518
consensus_4874#1      AAAGAGGCGTGTGATGCTACAAAAATATTTAGACCATTGCCGCAACTTTCAG-GTTAATG 533
                      **      *    * ***       *  ** * *  *  * * *  *****  * *    

consensus_4874#0      TTGTCACAAGCTGTAGTTCCATTCTAGCTTTGTTGGCATCCTGCCGTCCTACGTTA---- 574
consensus_4874#1      TTGATGTGTACCTCA--TCGAGAGCGATCATGTTACCAATGCGATCCTCGAACTTATTCC 591
                      ***       *   *  ** *         ****  **    *     * *  ***    

consensus_4874#0      GGCATATTTTGCCCCATCGCAAACCTTGCAGCAAAAAAGCTCTAGA--GCTGATGTTGAC 632
consensus_4874#1      GGTCTTTCATGTACAACAGCTAGTTCTGGGGGTTTCAAAATCCAAATTGCGGAAGTTCAA 651
                      **  * *  **  * *  ** *    **  *     **  ** * *  ** ** *** * 

consensus_4874#0      TGCATGGAG---AATTGGAG-ATAGAAACAATAC----CACCCATGTGGTGTTTGGTTTA 684
consensus_4874#1      GAGAGGAAACACAATAGCAGGACAGGTTCAGAAGAACGCACCTCTATACTGTGAAGTCAA 711
                         * * *    *** * ** * **   **  *     ****  * *  ***   **  *

consensus_4874#0      GGT-GTCCATGCTAATTCTAGAGTGATCAACTTTCCAAAAATTCTAGAATGATCACCAAC 743
consensus_4874#1      GATTGTCTGTGATGGCAAGGAGGTTACAACTGTGCCAACTGCTGATCCAACACCACCAAT 771
                      * * ***  ** *         ** *  *   * ****    *     *  * ****** 

consensus_4874#0      CAAGGCATGT---ATGAATAGGAAGAGATATATATATCATGTCCACAAAAGTTTCACGT- 799
consensus_4874#1      TTCACCTTCTCCTGTAAATAACAAGAG-TAATTCTATCAGCCCAACGCCACTATCACCTG 830
                           * * *    * ****  ***** **  * *****   * **   * * **** * 

consensus_4874#0      TAACAGATGTTACAAAAAATTCTAGGAAAAAAATTGA-ACATGTACTTCCAATAGTATTG 858
consensus_4874#1      CACCAGATCATAACAATCGCGCTGTGGCTGATGATGACAAAAAGGAGACTAATCCCAATG 890
                       * *****  **  **     **  *    *   *** * *       * ***   * **

consensus_4874#0      CACGTATATATAAAGTATCAACTTCAAATTCATTACTCCCTCCGTTTTATAATATTATAA 918
consensus_4874#1      AAAGGAATAAAATCACAAAATATTTGAAATGCTTCTCATTTTGATCTTATACTTTTATG- 949
                       * * *   * *    *  *  **  ** *  **      *   * ***** * ****  

consensus_4874#0      GTCGCTTAGAATTTTTCTTTCTAATACGAAATATATTTAAAATATAACAACATTCTAATA 978
consensus_4874#1      GTTGCTGCTTCAGTCACTTTTGCAGATATAGAACACTGCACGCATAGCATC-TTCAGACA 1008
                      ** ***       *  ****   * *   *  * * *  *   *** ** * ***  * *

consensus_4874#0      AAAATAAGCATATTATCAAAATATATTCAATGTTATATTTAATGAAAATGATTTGGAGTT 1038
consensus_4874#1      ACAA-AAGCTTGTAAA-AAAACACTTTCACCAATGT-TGTGATCTTGAATTTCTTGATTC 1065
                      * ** **** * * *  **** *  ****    * * * * **    *   * * ** * 

consensus_4874#0      ATATATATTGCTAAATTTTTCTATAAACTTAGTCAAACATAAAAAGGTTTGACTAAAAAA 1098
consensus_4874#1      ATTTGTACAGGAGA------TGATGGTTGTTATAAAAAAAAGA----------------- 1102
                      ** * **  *   *        **     *  * *** * * *                 

consensus_4874#0      TCAAAGCGACTTATAATATGAAATAGAGAGAGTATATTTTAGCCATAATAGAAAAGGAAA 1158
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      AATATTATATATTTAAGAGTATAAATGTGTCAGAAATTTGTCCTTTTTTCTCTCTCTCTA 1218
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      AGTATAATGAATTTGAAGTTAGGTGTGATACTATTGGAAGTGCATGTACATTTTTTTTTA 1278
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      GAATTTTCGGTGATATTTATTAGTTAGTGTGCACGGGACACTTGTGTGTACCATGTTCGG 1338
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      ATAGACAGAATAACCCTTTTTCAGAACAAGGGTAGTGGAAGCGAGCCTACAATTCTAGTT 1398
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      GATTCAGAGGAGTTACACCTAGTTCCTTCTCTATATGGGTAATTTTACCATCCATAAGAA 1458
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      AATACCGGGAGGTAATATATTTTCTAGTATAAAACCCGTTACCTTCAGCTATTAGATATT 1518
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      TTAGTATGAAATTTAGTACCTATGGCTACTTTCTCATCAAGGACCGTAAAATTTCTCTAG 1578
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      ATAATGTAAGGGCTTGTTCTTTATGGGTGATGTATAGAATTAAGTGTATGGAAATTATTC 1638
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      GAGAATATAAATGAATGAATTAAATATTAAAATATTGAATTGTTGGTTTTCAAAAAGTTT 1698
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      TCTAAGAAATGCCCATAATTAAAGTTTTTACAAATAAAGTATGGTTTTGAAGCTTACGAA 1758
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      GTGTGCCGTATCATCTACAATCTGTAAGCTGGAAAGAACACGACCCTTATGCGAGAAAGA 1818
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      ACTATATTTGTTTTTGTCGATGCATCTACAGTTAAGGGATAATGGCCCATCAGTGGTATA 1878
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      TTTCTAAAACCCACGTTTAATTTTTCGATTTGACAAAACCAATTATAATTTGCTCGGTCA 1938
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      GGTACAAAAGTACATCCCATCACGAATTTTGCTTCATGTGATTCCGCATTAATTTTATTC 1998
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      TCTGTTCTCAACTCCATATACGTGGAGTATATTGGATGGCAAACAGTAGAGTAGACTAGT 2058
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      AGTTCGAGTGTTATAGGTCTCTGAGATGCCGGCGTGAGCAGGGCGAGTACTTTGTTACAC 2118
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      TTCCACTGAAATGTGAACAGACCAGTACAGTGAGATTCCGTTCTCGTAGCTTTTTTTTTT 2178
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      TTCTTTGACACTCGCACAGCAATTCATCGTTGATTGCTGAATGATGCAGACAGGCCATTC 2238
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      TTTGGCATGGCCAGATAGGGGAGCTGAGAAGGACGACTGCCTAGAGCTTAGGAAAACCCA 2298
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      GGGCTTTCTGGTATATGCAGAGATATATACTGTTGTATAACTCTCATTTTAGGCTAGCTG 2358
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      AGCAATATAGATAACTCACCATACAGTAAAAAATGTTAAGAGCAAATCATCAGTACATAA 2418
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      CTCTGAAGAAACCGTTCGGTTTTTCTGGAGGGATAGGGCGCGCAGGATCTATATTTAAAG 2478
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      TCTTTTCATTTGGACATCATAGTCACGGTTGAGTCTAGGATTTATGTTTCCTTCTAGCTT 2538
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      GAGTCGTTGTTAAATATTAGGCTGCGTTTAAATCCAGGGGTGAAAAGTTTTGGCGTGTCA 2598
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      CATCAGATATACAGACACACATTTGAAGTATTAAACGTAGACTAATAACAAAACAAATTA 2658
consensus_4874#1      ------------------------------------------------------------
                                                                                  

consensus_4874#0      CAGATAAACTGCGAGATGAATTATTAAGCCTAATTATTC 2697
consensus_4874#1      ---------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)