cluster # 4878

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Oryza sativa
cluster # 4878 cluster # 4878 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4878#0 length = 2591 sequences # 3
consensusID : consensus_4878#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2591
fasta sequence
                              [GCCAGGTTCAGTTCGTTCAAACCAAACCTACGCGCCTCTCTCTCGATCGATCGATCGATCGCCGGGGCGGCGCGCGCGTTGCGACGAGATGGTGTCCGCGGCGGACGCGGTGATACCGGCGTGCGCGGCGGTCGGCATCGCGTTCGCGGTCTGGCAGTGGCTTCTCGTGTCGAGGGTGAAGGTGTCCCCTTACTCCGCCGCCGCGGCGGCCGCCCGGAACGGCGGCGCCGGGCGGGCCGTGTTCCGGCCGGAGGGCGAGGTCGACGACGACGACGGCGGGTGCGGGGACGACGAGGGGGCCGACGGCGACGGCGGCGTGGCCGCGATGGCGAGGTGCGCGGAGATCCAAAGCGCCATTCGGGTTGGAGCAAACTCGTTCTTGTTCACGCAATACAAGTACCTGGCCGCCTTCACGGCGGTCTTCGCCGTGGTCATCTTCCTCTTCCTGGGGTCCGTACACCGGTTCAGCACCGAAAGCCAGCCCTGCCAGTACACCAGAGGCAAGGCCTGCAAGCCGGCGCTGGCCAACGCCGTGTTCAGCACCATAGCCTTCCTCCTCGGCGCCGCCACCTCCGTCGCGTCGGGCTTCCTCGGCATGCGGATCGCCACGGCCGCGAACGCGAGGACCACGGTAGAGGCGAGGAGGGGCATCGGCCCGGCGTTCGCCGCCGCGTTCCGGTCCGGCGCCGTCATGGG-GTTCCTCCTGGCGTCCCTGGGCCTCCTGGTGCTCTACGTCGCCATCAAGGTGTTTGGTCTCTACTATGGCGATGACTGGGAAGGGCTGTACGAGTCGATCACCGGCTATGGGCTCGGTGGATCGTCCATGGCGCTGTTTGGGAGGGTTGGTGGTGGGATTTACACCAAGGCCGCGGATGTCGGCGCCGATCTTGTCGGCAAGGTTGAGAGGAACATCCCTGAGGATGACCCGAGAAACCCCGCGGTGATCGCTGACAATGTGGGTGACAACGTCGGCGACATTGCCGGGATGGGCTCCGACCTGTTCGGCTCCTACGCCGAGTCCACCTGCGCGGCGCTGTTCGTCGGGTCCATCTCGTCGTTCGGCGCTGACCACAACTTCGCGGCAGTGTCGTACCCTCTGCTGATAAGCTCGGCCGGCCTCATTGTCTGCCTGATCACCACGCTCTTCGCCACTGACCTCTACAGGGTCAAGACCGTCGACGGCGTCGCGCCGGCGCTGAAGCTGCAGCTGCTCATCTCCACCGTGCTGATGACCGTCGGCGTCCTCGTCGTCACCTTCACAGCCCTCCCCCACGAGTTCACCATGTTCGACTTTGGAGAGGTGAAGCGAGTCAAGAACTGGCATCTGTTCTTCTGCGTCACAATCGGGCTTTGGGCAGGTCTCGCGATCGGGTTCACCACCGAGTACTTCACCAGCAATGCTTACAGTCCGGTGAGGGACGTCGCCGACTCCTGCAGGACCGGAGCGGCGACGAACGTCATCTTCGGGCTCGCCCTCGGGTACAAGTCCGTCATCGTGCCAGTGTTCGCCATCGCCGTGTCCATCTACGTCAGCTTCACGCTTGCCTCCATCTACGGCATTGCTGTCGCTGCGCTGGGAATGCTCAGCACGGTCGCCACCGGGCTCGCCATCGACGCCTACGGGCCGATCAGCGACAACGCCGGTGGGATCGCGGAGATGGCCGGAATGAGCCACCGGATCCGGCAAAGAACCGACGCCCTCGACGCCGCCGGTAACACCACCGCCGCAATCGGCAAGGGATTCGCCATCGGATCGGCAGCGCTGGTGTCGCTGGCGCTGTTCGGCGCGTTCGTGAGCCGGGCGGGGATGGCGGTGATCAACGTGCTGAGCCCCAAGGTGTTCGTGGGGCTCGTCGTGGGGGCGATGCTGCCCTACTGGTTCTCGGCGATGACGATGAAGAGCGTCGGCAGCGCGGCGCTGAAGATGGTGGAGGAGGTGCGGCGGGAGTTCGCCGCCATCCCGGGGCTGATGGAGGGGCGCGCCACGCCGGACTACGCCAGCTGCGTCAGGATCTCCACCGACGCGTCGCTCAGGGAGATGATGCCCCCCGGGGCGCTGGTGCTGCTCGCGCCGCTGGTCGCCGGCACCTTCTTCGGCGTCCAGACGCTCGCCGGCCTCCTCGCCGGCGCGCTCGTTTCCGGCGTGCAGGTTGCCATATCTGCTTCCAACAGTGGGGGAGCCTGGGACAATGCCAAGAAATATATCGAGGCAGGTGCATCCGACCATGCAAAGGCACTTGGTCCCAAGGGTTCGGACGCTCACAAGGCGGCGGTGATCGGCGATACCATTGGCGACCCGCTCAAGGACACATCCGGGCCGTCGCTCAACATCTTGATCAAGCTCATGGCCGTCGAATCTCTCGTCTTCGCGCCATTCTTTGCCGCCCATGGAGGATTGATATTCAAGTGACCGAAGAGCAAGCTGAAGCACAATCACACACAGCATACGCACGTCTGTATGGTCATAGAGAACAATGTTGCGTGACAATCGCACGGAGTAAACAATCATTTTGATTATCTGTATTTATTCAGGCTAGCACCTGAGAGTTCCATGCCAAACACAAAAATACAAAACAACAAACAAGGAAAGA]

[+] EMBL AY333187             [GCCAGGTTCAGTTCGTTCAAACCAAACCTACGCGCCTCTCTCTCGATCGATCGATCGATCGCCGGGGCGGCGCGCGCGTTGCGACGAGATGGTGTCCGCGGCGGACGCGGTGATACCGGCGTGCGCGGCGGTCGGCATCGCGTTCGCGGTCTGGCAGTGGCTTCTCGTGTCGAGGGTGAAGGTGTCCCCTTACTCCGCCGCCGCGGCGGCCGCCCGGAACGGCGGCGCCGGGCGGGCCGTGTTCCGGCCGGAGGGCGAGGTCGACGACGACGACGGCGGGTGCGGGGACGACGAGGGGGCCGACGGCGACGGCGGCGTGGCCGCGATGGCGAGGTGCGCGGAGATCCAAAGCGCCATTCGGGTTGGAGCAAACTCGTTCTTGTTCACGCAATACAAGTACCTGGCCGCCTTCACGGCGGTCTTCGCCGTGGTCATCTTCCTCTTCCTGGGGTCCGTACACCGGTTCAGCACCGAAAGCCAGCCCTGCCAGTACACCAGAGGCAAGGCCTGCAAGCCGGCGCTGGCCAACGCCGTGTTCAGCACCATAGCCTTCCTCCTCGGCGCCGCCACCTCCGTCGCGTCGGGCTTCCTCGGCATGCGGATCGCCACGGCCGCGAACGCGAGGACCACGGTAGAGGCGAGGAGGGGCATCGGCCCGGCGTTCGCCGCCGCGTTCCGGTCCGGCGCCGTCATGGG GTTCCTCCTGGCGTCCCTGGGCCTCCTGGTGCTCTACGTCGCCATCAAGGTGTTTGGTCTCTACTATGGCGATGACTGGGAAGGGCTGTACGAGTCGATCACCGGCTATGGGCTCGGTGGATCGTCCATGGCGCTGTTTGGGAGGGTTGGTGGTGGGATTTACACCAAGGCCGCGGATGTCGGCGCCGATCTTGTCGGCAAGGTTGAGAGGAACATCCCTGAGGATGACCCGAGAAACCCCGCGGTGATCGCTGACAATGTGGGTGACAACGTCGGCGACATTGCCGGGATGGGCTCCGACCTGTTCGGCTCCTACGCCGAGTCCACCTGCGCGGCGCTGTTCGTCGGGTCCATCTCGTCGTTCGGCGCTGACCACAACTTCGCGGCAGTGTCGTACCCTCTGCTGATAAGCTCGGCCGGCCTCATTGTCTGCCTGATCACCACGCTCTTCGCCACTGACCTCTACAGGGTCAAGACCGTCGACGGCGTCGCGCCGGCGCTGAAGCTGCAGCTGCTCATCTCCACCGTGCTGATGACCGTCGGCGTCCTCGTCGTCACCTTCACAGCCCTCCCCCACGAGTTCACCATGTTCGACTTTGGAGAGGTGAAGCGAGTCAAGAACTGGCATCTGTTCTTCTGCGTCACAATCGGGCTTTGGGCAGGTCTCGCGATCGGGTTCACCACCGAGTACTTCACCAGCAATGCTTACAGTCCGGTGAGGGACGTCGCCGACTCCTGCAGGACCGGAGCGGCGACGAACGTCATCTTCGGGCTCGCCCTCGGGTACAAGTCCGTCATCGTGCCAGTGTTCGCCATCGCCGTGTCCATCTACGTCAGCTTCACGCTTGCCTCCATCTACGGCATTGCTGTCGCTGCGCTGGGAATGCTCAGCACGGTCGCCACCGGGCTCGCCATCGACGCCTACGGGCCGATCAGCGACAACGCCGGTGGGATCGCGGAGATGGCCGGAATGAGCCACCGGATCCGGCAAAGAACCGACGCCCTCGACGCCGCCGGTAACACCACCGCCGCAATCGGCAAGGGATTCGCCATCGGATCGGCAGCGCTGGTGTCGCTGGCGCTGTTCGGCGCGTTCGTGAGCCGGGCGGGGATGGCGGTGATCAACGTGCTGAGCCCCAAGGTGTTCGTGGGGCTCGTCGTGGGGGCGATGCTGCCCTACTGGTTCTCGGCGATGACGATGAAGAGCGTCGGCAGCGCGGCGCTGAAGATGGTGGAGGAGGTGCGGCGGGAGTTCGCCGCCATCCCGGGGCTGATGGAGGGGCGCGCCACGCCGGACTACGCCAGCTGCGTCAGGATCTCCACCGACGCGTCGCTCAGGGAGATGATGCCCCCCGGGGCGCTGGTGCTGCTCGCGCCGCTGGTCGCCGGCACCTTCTTCGGCGTCCAGACGCTCGCCGGCCTCCTCGCCGGCGCGCTCGTTTCCGGCGTGCAGGTTGCCATATCTGCTTCCAACAGTGGGGGAGCCTGGGACAATGCCAAGAAATATATCGAGGCAGGTGCATCCGACCATGCAAAGGCACTTGGTCCCAAGGGTTCGGACGCTCACAAGGCGGCGGTGATCGGCGATACCATTGGCGACCCGCTCAAGGACACATCCGGGCCGTCGCTCAACATCTTGATCAAGCTCATGGCCGTCGAATCTCTCGTCTTCGCGCCATTCTTTGCCGCCCATGGAGGATTGATATTCAAGTGACCGAAGAGCAAGCTGAAGCACAATCACACACAGCATACGCACGTCTGTATGGTCATAGAGAACAATGTTGCGTGACAATCGCACGGAGTAAACAATCATTTTGATTATCTGTATTTATTCAGGCTAGCACCTGAGAGTTCCATGCCAAACACAAAAATACAAAACAACAAACAAGGAAAGA]
[+] EMBL CB647144             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATGGGCCTTCCTCCTGGCGTCCCTGGGCCTCCTGGTGCTCTACGTCGCCATCAAGGTGTTTGGTCTCTACTATGGCGATGACTGGGAAGGGCTGTACGAGTCGATCACCGGCTATGGGCTCGGTGGATCGTCCATGGCGCTGTTTGGGAGGGTTGGTGGTGGGATTTACACCAAGGCCGCGGATGTCGGCGCCGATCTTGTCGGCAAGGTTGAGAGGAACATCCCTGAGGATGACCCGAGAAACCCCGCGGTGATCGCTGACAATGTGGGTGACAACGTCGGCGACATTGCCGGGATGGGCTCCGACCTGTTCGGCTCCTACGCCGAGTCCACCTGCGCGGCGCTGTTCGTCGGGTCCATCTCGTCGTTCGGCGCTGACCACAACTTCGCGGCAGTGTCGTACCCTCTGCTGATAAGCTCGGCCGGCCTCATTGTCTGCCTGATCACCACGCTCTTCGCCACTGACCTCTACAGGGTCAAGACCGTCGACGGCGTCGCGCCGGCGCTGAAGCTGCAGCTGCTCATCTCCACCGTGCTGATGACCGTCGGCGTCCTCGTCGTCACCTTCACAGCCCTCCCCCACGAGTTCACCATGTTCGACTTTGGAGAGGTGAAGCGAGTCAAGAACTGGCATCTGTTCTTCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB647145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTTCGTGGGGCTCGTCGTGGGGGCGATGCTGCCCTACTGGTTCTCGGCGATGACGATGAAGAGCGTCGGCAGCGCGGCGCTGAAGATGGTGGAGGAGGTGCGGCGGCAGTTCGCCGCCATCCCGGGGCTGATGGAGGGGCGCGCCACGCCGGACTACGCCAGCTGCGTCAGGATCTCCACCGACGCGTCGCTCAGGGAGATGATGCCCCCCGGGGCGCTGGTGCTGCTCGCGCCGCTGGTCGCCGGCACCTTCTTCGGCGTCCAGACGCTCGCCGGCCTCCTCGCCGGCGCGCTCGTTTCCGGCGTGCAGGTTGCCATATCTGCTTCCAACAGTGGGGGAGCCTGGGACAATGCCAAGAAATATATCGAGGCAGGTGCATCCGACCATGCAAAGGCACTTGGTCCCAAGGGTTCGGACGCTCACAAGGCGGCGGTGATCGGCGATACCATTGGCGACCCGCTCAAGGACACATCCGGGCCGTCGCTCAACATCTTGATCAAGCTCATGGCCGTCGAATCTCTCGTCTTCGCGCCATTCTTTGCCGCCCATGGAGGATTGATATTCAAGTGAACGAAGAGCAAGCTGAAGCACAATCACACACAGCATACGCACGTCTGTATGGTCATAGAGAACAATGTTGCGTGACAATCGCACGGAGTAAACAATCATTTTGATTAACATTATaaag                                                               ]




>consensus_4878#0
GCCAGGTTCAGTTCGTTCAAACCAAACCTACGCGCCTCTCTCTCGATCGATCGATCGATC
GCCGGGGCGGCGCGCGCGTTGCGACGAGATGGTGTCCGCGGCGGACGCGGTGATACCGGC
GTGCGCGGCGGTCGGCATCGCGTTCGCGGTCTGGCAGTGGCTTCTCGTGTCGAGGGTGAA
GGTGTCCCCTTACTCCGCCGCCGCGGCGGCCGCCCGGAACGGCGGCGCCGGGCGGGCCGT
GTTCCGGCCGGAGGGCGAGGTCGACGACGACGACGGCGGGTGCGGGGACGACGAGGGGGC
CGACGGCGACGGCGGCGTGGCCGCGATGGCGAGGTGCGCGGAGATCCAAAGCGCCATTCG
GGTTGGAGCAAACTCGTTCTTGTTCACGCAATACAAGTACCTGGCCGCCTTCACGGCGGT
CTTCGCCGTGGTCATCTTCCTCTTCCTGGGGTCCGTACACCGGTTCAGCACCGAAAGCCA
GCCCTGCCAGTACACCAGAGGCAAGGCCTGCAAGCCGGCGCTGGCCAACGCCGTGTTCAG
CACCATAGCCTTCCTCCTCGGCGCCGCCACCTCCGTCGCGTCGGGCTTCCTCGGCATGCG
GATCGCCACGGCCGCGAACGCGAGGACCACGGTAGAGGCGAGGAGGGGCATCGGCCCGGC
GTTCGCCGCCGCGTTCCGGTCCGGCGCCGTCATGGGGTTCCTCCTGGCGTCCCTGGGCCT
CCTGGTGCTCTACGTCGCCATCAAGGTGTTTGGTCTCTACTATGGCGATGACTGGGAAGG
GCTGTACGAGTCGATCACCGGCTATGGGCTCGGTGGATCGTCCATGGCGCTGTTTGGGAG
GGTTGGTGGTGGGATTTACACCAAGGCCGCGGATGTCGGCGCCGATCTTGTCGGCAAGGT
TGAGAGGAACATCCCTGAGGATGACCCGAGAAACCCCGCGGTGATCGCTGACAATGTGGG
TGACAACGTCGGCGACATTGCCGGGATGGGCTCCGACCTGTTCGGCTCCTACGCCGAGTC
CACCTGCGCGGCGCTGTTCGTCGGGTCCATCTCGTCGTTCGGCGCTGACCACAACTTCGC
GGCAGTGTCGTACCCTCTGCTGATAAGCTCGGCCGGCCTCATTGTCTGCCTGATCACCAC
GCTCTTCGCCACTGACCTCTACAGGGTCAAGACCGTCGACGGCGTCGCGCCGGCGCTGAA
GCTGCAGCTGCTCATCTCCACCGTGCTGATGACCGTCGGCGTCCTCGTCGTCACCTTCAC
AGCCCTCCCCCACGAGTTCACCATGTTCGACTTTGGAGAGGTGAAGCGAGTCAAGAACTG
GCATCTGTTCTTCTGCGTCACAATCGGGCTTTGGGCAGGTCTCGCGATCGGGTTCACCAC
CGAGTACTTCACCAGCAATGCTTACAGTCCGGTGAGGGACGTCGCCGACTCCTGCAGGAC
CGGAGCGGCGACGAACGTCATCTTCGGGCTCGCCCTCGGGTACAAGTCCGTCATCGTGCC
AGTGTTCGCCATCGCCGTGTCCATCTACGTCAGCTTCACGCTTGCCTCCATCTACGGCAT
TGCTGTCGCTGCGCTGGGAATGCTCAGCACGGTCGCCACCGGGCTCGCCATCGACGCCTA
CGGGCCGATCAGCGACAACGCCGGTGGGATCGCGGAGATGGCCGGAATGAGCCACCGGAT
CCGGCAAAGAACCGACGCCCTCGACGCCGCCGGTAACACCACCGCCGCAATCGGCAAGGG
ATTCGCCATCGGATCGGCAGCGCTGGTGTCGCTGGCGCTGTTCGGCGCGTTCGTGAGCCG
GGCGGGGATGGCGGTGATCAACGTGCTGAGCCCCAAGGTGTTCGTGGGGCTCGTCGTGGG
GGCGATGCTGCCCTACTGGTTCTCGGCGATGACGATGAAGAGCGTCGGCAGCGCGGCGCT
GAAGATGGTGGAGGAGGTGCGGCGGGAGTTCGCCGCCATCCCGGGGCTGATGGAGGGGCG
CGCCACGCCGGACTACGCCAGCTGCGTCAGGATCTCCACCGACGCGTCGCTCAGGGAGAT
GATGCCCCCCGGGGCGCTGGTGCTGCTCGCGCCGCTGGTCGCCGGCACCTTCTTCGGCGT
CCAGACGCTCGCCGGCCTCCTCGCCGGCGCGCTCGTTTCCGGCGTGCAGGTTGCCATATC
TGCTTCCAACAGTGGGGGAGCCTGGGACAATGCCAAGAAATATATCGAGGCAGGTGCATC
CGACCATGCAAAGGCACTTGGTCCCAAGGGTTCGGACGCTCACAAGGCGGCGGTGATCGG
CGATACCATTGGCGACCCGCTCAAGGACACATCCGGGCCGTCGCTCAACATCTTGATCAA
GCTCATGGCCGTCGAATCTCTCGTCTTCGCGCCATTCTTTGCCGCCCATGGAGGATTGAT
ATTCAAGTGACCGAAGAGCAAGCTGAAGCACAATCACACACAGCATACGCACGTCTGTAT
GGTCATAGAGAACAATGTTGCGTGACAATCGCACGGAGTAAACAATCATTTTGATTATCT
GTATTTATTCAGGCTAGCACCTGAGAGTTCCATGCCAAACACAAAAATACAAAACAACAA
ACAAGGAAAGA
clustalw multiple alignements is not computed in this case