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Oryza sativa
cluster # 490 cluster # 490       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_490#0 length = 4230 sequences # 1  
 consensus_490#1 length = 460 sequences # 1  
consensusID : consensus_490#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 4230
fasta sequence 
                              [GTGCTAAGTTGTAAGCTGATTTACACTAATGTTACTGTTCAGCAGCTAAGGACAATCTCTAGTCGAAACAGTAGCTGAAGCCAACGGCTTCAACATGGTGTACAAAGAAACTGCAAATCAATCAGGGATCCAATTCACCTGCGGCACACAAGAACCATTTCCAGATGCTTCAAAAGAAGAAAATGTGAAAAACAGGAGGAAATCTTCTTATGGAGAGGCAACTATTTCACAACATTTCACTTTCTCTTGGATGAATGGTCTTCTTGCTAAAGGTGCCAATAAGCCTTTGAATGAGGATGACATACCAGATGTTGGTGAGGAGGAAAGTGCCCAACACATCTCCAGAATATTCAGTAATATCATTGTGAAAGGGAATTTTCCTCTGACAGTTTCATCGATTTGTAAAGCAGCCTTCCTTCTCATTTGGAAGAAGGCGGCACTCAATGCAACCTTTGGAGTCCTAAGTGTAGTCGCCTCCTTTGTGGGGGCATACTTAATCAAGGACTTCGTGGGCTATCTAAGTGGAGATAATGGATTTGAAAGAGGCTACTCTCTTGTTCTTGTATTTGTAGGTGCGAAGGCTATTGAAACTCTTGCTTACAGACAATGGTTCTTTGGAAGTCTACAGGTTTATTTGCGCCTAAGAACATCTCTGATATCTCAGGTATACCAAAAGGTCCTTTATTTATCAAGCCAGTCAAGGCAGAAACATACCTCAGGGGAGATAATTAACTATGTGAGTGTTGACATCGAGAGGATTGTTAATGTTGCATGGTATGTGAACATGGTCTTCATGATGCCTATACAGATTACACTAGCAACTTATATTCTTTGGAAAAATCTTGGTCTGGGTTCTTTAGCTGGAATAGCAACAACAGCCATAATAATGCTTTGCAATATTCCTTTTACAAGAATCCAGAAAAGATTGCACGCAGGAATTATGAAAGCAAAAGATGACAGAATGGACATGACATCTGAAGTTATAAGAAGCATGAAGATCTTAAAACTTCAAGCTTGGGATATCCAATACCTTAGGAAATTGGAATATTTGAGGAAAGGAGAACATTTGTGGTTGTGGGAATTTCTAAGACTAAAAGCACTACTAGCATTTATGTTCTGGGGAGCACCCGCTGTCATATCAATCATGACATTTGCTTCATGCATTCTGATGGGAATCCCTCTAACAGCTGGAAGAGTGTTGTCCACACTAGCAACTGTGAATATACTGAAGGAGCCTATCTTTAGTCTACCAGAATTGCTTACTGCCTTTGCACAGGGGAAGATCTCAGCTGACAGAATAGTGTCATATCTCCAAGAAGAAGAAATAAGATCTGATGCAATTGAGGAAGTAGCAATAGACGAAAATGAATTTTCTGCAGAGATTGATCAGGGAGCATTCAGTTGGAAAACTGATGCAAAAATCCCAACACTTCAAGATATACATGTAAAGATACACAAAGGGATGAAAGTGGCAGTATGTGGAGCTGTTGGGAGTGGAAAATCTAGCCTGTTGTCATGTGTACTTGGAGAGATGCCAAAAGTGCAAGGAACGGTTAAGGTCTTTGGAACCAAAGCATATGTTCCACAGTCGTCATGGATACTTTCTGGGACTATTAGAGAAAACATTCTCTTTGGGAGCCCATTTGAAACTGATAGGTATGAGCGGACAATTGAAGCATGTGCCTTGGTTAAAGACATCGGAGTTTTCTCGGATGGTGATATGACAGATATAGGAGAACGGGGAACGACTATGAGTGGGGGACAAAAGCAACGGATTCAAATAGCAAGAGCAGTTTACAAGGATGCTGATGTCTACCTGTTTGATGATCCTTTCAGTGCTGTAGACCCTCAAACTGGGAGGCATCTATACAAGAAATGCCTGATGGGGGTCCTAAGGGATAAAACTGTGTTATACGTCACGCACCAAGTTGAATTTCTAGTTGATGCAGACCTTATTATGGTGATGCAAAATGGAAGGATAGCACAAGCAGGGAAATTTCAAGAACTCCAACAGAACATGGCTTTTGGAGTTATCTTTGGGGCTCACTTTTGTGCCGTCGAACAAGTTTGTAACGCAAAAGGCACAAGCATATATTTGTCAAAGCATCATGCAGAATCAGAAAAGGTACCAAGCATCAATGAGTCCGATGCAGAAAAGGAAATCAGCAGCAAATGGCAAAACACAAATATGATAAATTGCAGACAAGAAGTATTTAGAGATAACACTGAAGAAGGGAAATTGCTGCAGGGTGAAGAAAGAGAGAATGGATACATTAGCAAGCAAGTGTATTGGTCATACCTCACAGCTGCTCGAGGTGGTCTTTTCATTCCTATGATAATTGCAGCACAATGCTTCTTTCAGATATTTGAAGTGGGAAGCAACTATTGGATGGCATCAGCTTGCCATCCACGAACTGGAAGCAAATCAAAAATGGAATCCACCCAGTTCATGGTATATGTATTTATATCAGTTGGCAGCGCCTTGTGTATCTTGATTCGAGCAGTTCTTGTAGCTGTAACCGGCCTCCTCACATCAGAAAAATTGTTCAAGAGCATGATGCATTGCATCTTTCATGCTCCTATGTCTTTCTTTGACTCGACACCTACAGGGCGAATCTTAAACAGGGCTTCGATTGATCAAAGTGTGCTAGATTTGGAGACAGCGTCAACATTAAGTGAGAGCACATTTTCAGTGATGCAGTTTCTAGGAACAATACTAATCATATCACATGTTTCCTGGCCAGTTCTCATTATTTTTATTCCATCAATATTGATTTGCATCAGGTATCAGAGATATTACAGTCTAACAGCAACAGAATTAGCTCGCCTATCAGGAATTCAAAAGGCTCCAATTCTTCATCATTTTGGGGAAACTTTCTATGGAGCTGCAATAATTCGAGCATTTCGCCAAGAAGACCGGTTCTACAGATCAAATCTGAGTCTACTTGACAATCATTCAAGACCATGGTTTCACTTGATGGCTGCAGTAGAATGGCTCTCTTTCAGAATGAATTTGTTATGCAACTTTGTCTTTGGGTTCTCGTTGGTTTTGCTTGTGCGTCTTCCACAAGGTTTTGTTAATCCAAGCATTGGTGGGCTGGTAGTGATGTATGCATGGAATTTGAATACACAATTATCAGAAGCCACCCGGAATATAAGTCGTGCAGAAGCAAACATGATATCAGTTGAAAGAATATTACAGTACACAAAGCTTCCAAGTGAAGCCCCAACCATAACCGAGGGTAGCAAGCCACCAATGGCATGGCCAGAGTTTGGCATGATAAGCATAAGCAACTTAGAGGTCAGATATGCAGAACATCTCCCTTCAGTATTAAAAAACATAACTTGTGTGATTCCAGCTGAGAAAACAGTAGGTATTGTTGGACGCACAGGTAGTGGGAAGTCAACCTTAGTACAAGTACTTTTTCGGATTGTTGAGCCAAGAGAAGGGACCATCAAGATTGACAGCATCGACATCTGCAAAATTGGACTTCATGATCTGAGATCGAGAATATGTATTCTCCCACAGGATCCGGTGATGTTCGATGGTACAATCAGAGGAAATCTTGATCCCATGAACGAGTACCCAGATAGTAGGATATGGGAGGTAGTAGACAAGTGTCAGCTTGGCAATGTGGTGCGCTCGACTGAGAAAAAGCTGGATGAAATAGTAATTGAAAATGGGGACAACTGGAGCATGGGACAGCGACAACTATTTTGTTTAGGCAGAATTCTCCTGAGGAAGAGCAAGATACTAGTCCTTGATGAGGCAACTGCTTCAGTTGACTCTGCTACAGACCGGATTATTCAAGAGATAATTCGTCAAGAATTCAAAGATTGCACAGTGCTTGCAATTGCCCATAGGATGAACACTGTTATTGATAGTGACCTTATTCTTGTTCTTGGTGAAGGTAGTATTTTAGAATACGACACCCCCACCAAACTGCTCCAGAGAGAGGACTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGGACTTCAAGTCTTCAACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTACATGGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGCAGGGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAATAGCAAAACAGCGTAAATGATTAATTTACAGAA]

[+] EMBL AK099941             [GTGCTAAGTTGTAAGCTGATTTACACTAATGTTACTGTTCAGCAGCTAAGGACAATCTCTAGTCGAAACAGTAGCTGAAGCCAACGGCTTCAACATGGTGTACAAAGAAACTGCAAATCAATCAGGGATCCAATTCACCTGCGGCACACAAGAACCATTTCCAGATGCTTCAAAAGAAGAAAATGTGAAAAACAGGAGGAAATCTTCTTATGGAGAGGCAACTATTTCACAACATTTCACTTTCTCTTGGATGAATGGTCTTCTTGCTAAAGGTGCCAATAAGCCTTTGAATGAGGATGACATACCAGATGTTGGTGAGGAGGAAAGTGCCCAACACATCTCCAGAATATTCAGTAATATCATTGTGAAAGGGAATTTTCCTCTGACAGTTTCATCGATTTGTAAAGCAGCCTTCCTTCTCATTTGGAAGAAGGCGGCACTCAATGCAACCTTTGGAGTCCTAAGTGTAGTCGCCTCCTTTGTGGGGGCATACTTAATCAAGGACTTCGTGGGCTATCTAAGTGGAGATAATGGATTTGAAAGAGGCTACTCTCTTGTTCTTGTATTTGTAGGTGCGAAGGCTATTGAAACTCTTGCTTACAGACAATGGTTCTTTGGAAGTCTACAGGTTTATTTGCGCCTAAGAACATCTCTGATATCTCAGGTATACCAAAAGGTCCTTTATTTATCAAGCCAGTCAAGGCAGAAACATACCTCAGGGGAGATAATTAACTATGTGAGTGTTGACATCGAGAGGATTGTTAATGTTGCATGGTATGTGAACATGGTCTTCATGATGCCTATACAGATTACACTAGCAACTTATATTCTTTGGAAAAATCTTGGTCTGGGTTCTTTAGCTGGAATAGCAACAACAGCCATAATAATGCTTTGCAATATTCCTTTTACAAGAATCCAGAAAAGATTGCACGCAGGAATTATGAAAGCAAAAGATGACAGAATGGACATGACATCTGAAGTTATAAGAAGCATGAAGATCTTAAAACTTCAAGCTTGGGATATCCAATACCTTAGGAAATTGGAATATTTGAGGAAAGGAGAACATTTGTGGTTGTGGGAATTTCTAAGACTAAAAGCACTACTAGCATTTATGTTCTGGGGAGCACCCGCTGTCATATCAATCATGACATTTGCTTCATGCATTCTGATGGGAATCCCTCTAACAGCTGGAAGAGTGTTGTCCACACTAGCAACTGTGAATATACTGAAGGAGCCTATCTTTAGTCTACCAGAATTGCTTACTGCCTTTGCACAGGGGAAGATCTCAGCTGACAGAATAGTGTCATATCTCCAAGAAGAAGAAATAAGATCTGATGCAATTGAGGAAGTAGCAATAGACGAAAATGAATTTTCTGCAGAGATTGATCAGGGAGCATTCAGTTGGAAAACTGATGCAAAAATCCCAACACTTCAAGATATACATGTAAAGATACACAAAGGGATGAAAGTGGCAGTATGTGGAGCTGTTGGGAGTGGAAAATCTAGCCTGTTGTCATGTGTACTTGGAGAGATGCCAAAAGTGCAAGGAACGGTTAAGGTCTTTGGAACCAAAGCATATGTTCCACAGTCGTCATGGATACTTTCTGGGACTATTAGAGAAAACATTCTCTTTGGGAGCCCATTTGAAACTGATAGGTATGAGCGGACAATTGAAGCATGTGCCTTGGTTAAAGACATCGGAGTTTTCTCGGATGGTGATATGACAGATATAGGAGAACGGGGAACGACTATGAGTGGGGGACAAAAGCAACGGATTCAAATAGCAAGAGCAGTTTACAAGGATGCTGATGTCTACCTGTTTGATGATCCTTTCAGTGCTGTAGACCCTCAAACTGGGAGGCATCTATACAAGAAATGCCTGATGGGGGTCCTAAGGGATAAAACTGTGTTATACGTCACGCACCAAGTTGAATTTCTAGTTGATGCAGACCTTATTATGGTGATGCAAAATGGAAGGATAGCACAAGCAGGGAAATTTCAAGAACTCCAACAGAACATGGCTTTTGGAGTTATCTTTGGGGCTCACTTTTGTGCCGTCGAACAAGTTTGTAACGCAAAAGGCACAAGCATATATTTGTCAAAGCATCATGCAGAATCAGAAAAGGTACCAAGCATCAATGAGTCCGATGCAGAAAAGGAAATCAGCAGCAAATGGCAAAACACAAATATGATAAATTGCAGACAAGAAGTATTTAGAGATAACACTGAAGAAGGGAAATTGCTGCAGGGTGAAGAAAGAGAGAATGGATACATTAGCAAGCAAGTGTATTGGTCATACCTCACAGCTGCTCGAGGTGGTCTTTTCATTCCTATGATAATTGCAGCACAATGCTTCTTTCAGATATTTGAAGTGGGAAGCAACTATTGGATGGCATCAGCTTGCCATCCACGAACTGGAAGCAAATCAAAAATGGAATCCACCCAGTTCATGGTATATGTATTTATATCAGTTGGCAGCGCCTTGTGTATCTTGATTCGAGCAGTTCTTGTAGCTGTAACCGGCCTCCTCACATCAGAAAAATTGTTCAAGAGCATGATGCATTGCATCTTTCATGCTCCTATGTCTTTCTTTGACTCGACACCTACAGGGCGAATCTTAAACAGGGCTTCGATTGATCAAAGTGTGCTAGATTTGGAGACAGCGTCAACATTAAGTGAGAGCACATTTTCAGTGATGCAGTTTCTAGGAACAATACTAATCATATCACATGTTTCCTGGCCAGTTCTCATTATTTTTATTCCATCAATATTGATTTGCATCAGGTATCAGAGATATTACAGTCTAACAGCAACAGAATTAGCTCGCCTATCAGGAATTCAAAAGGCTCCAATTCTTCATCATTTTGGGGAAACTTTCTATGGAGCTGCAATAATTCGAGCATTTCGCCAAGAAGACCGGTTCTACAGATCAAATCTGAGTCTACTTGACAATCATTCAAGACCATGGTTTCACTTGATGGCTGCAGTAGAATGGCTCTCTTTCAGAATGAATTTGTTATGCAACTTTGTCTTTGGGTTCTCGTTGGTTTTGCTTGTGCGTCTTCCACAAGGTTTTGTTAATCCAAGCATTGGTGGGCTGGTAGTGATGTATGCATGGAATTTGAATACACAATTATCAGAAGCCACCCGGAATATAAGTCGTGCAGAAGCAAACATGATATCAGTTGAAAGAATATTACAGTACACAAAGCTTCCAAGTGAAGCCCCAACCATAACCGAGGGTAGCAAGCCACCAATGGCATGGCCAGAGTTTGGCATGATAAGCATAAGCAACTTAGAGGTCAGATATGCAGAACATCTCCCTTCAGTATTAAAAAACATAACTTGTGTGATTCCAGCTGAGAAAACAGTAGGTATTGTTGGACGCACAGGTAGTGGGAAGTCAACCTTAGTACAAGTACTTTTTCGGATTGTTGAGCCAAGAGAAGGGACCATCAAGATTGACAGCATCGACATCTGCAAAATTGGACTTCATGATCTGAGATCGAGAATATGTATTCTCCCACAGGATCCGGTGATGTTCGATGGTACAATCAGAGGAAATCTTGATCCCATGAACGAGTACCCAGATAGTAGGATATGGGAGGTAGTAGACAAGTGTCAGCTTGGCAATGTGGTGCGCTCGACTGAGAAAAAGCTGGATGAAATAGTAATTGAAAATGGGGACAACTGGAGCATGGGACAGCGACAACTATTTTGTTTAGGCAGAATTCTCCTGAGGAAGAGCAAGATACTAGTCCTTGATGAGGCAACTGCTTCAGTTGACTCTGCTACAGACCGGATTATTCAAGAGATAATTCGTCAAGAATTCAAAGATTGCACAGTGCTTGCAATTGCCCATAGGATGAACACTGTTATTGATAGTGACCTTATTCTTGTTCTTGGTGAAGGTAGTATTTTAGAATACGACACCCCCACCAAACTGCTCCAGAGAGAGGACTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGGACTTCAAGTCTTCAACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTACATGGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGCAGGGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAATAGCAAAACAGCGTAAATGATTAATTTACAGAA]




>consensus_490#0
GTGCTAAGTTGTAAGCTGATTTACACTAATGTTACTGTTCAGCAGCTAAGGACAATCTCT
AGTCGAAACAGTAGCTGAAGCCAACGGCTTCAACATGGTGTACAAAGAAACTGCAAATCA
ATCAGGGATCCAATTCACCTGCGGCACACAAGAACCATTTCCAGATGCTTCAAAAGAAGA
AAATGTGAAAAACAGGAGGAAATCTTCTTATGGAGAGGCAACTATTTCACAACATTTCAC
TTTCTCTTGGATGAATGGTCTTCTTGCTAAAGGTGCCAATAAGCCTTTGAATGAGGATGA
CATACCAGATGTTGGTGAGGAGGAAAGTGCCCAACACATCTCCAGAATATTCAGTAATAT
CATTGTGAAAGGGAATTTTCCTCTGACAGTTTCATCGATTTGTAAAGCAGCCTTCCTTCT
CATTTGGAAGAAGGCGGCACTCAATGCAACCTTTGGAGTCCTAAGTGTAGTCGCCTCCTT
TGTGGGGGCATACTTAATCAAGGACTTCGTGGGCTATCTAAGTGGAGATAATGGATTTGA
AAGAGGCTACTCTCTTGTTCTTGTATTTGTAGGTGCGAAGGCTATTGAAACTCTTGCTTA
CAGACAATGGTTCTTTGGAAGTCTACAGGTTTATTTGCGCCTAAGAACATCTCTGATATC
TCAGGTATACCAAAAGGTCCTTTATTTATCAAGCCAGTCAAGGCAGAAACATACCTCAGG
GGAGATAATTAACTATGTGAGTGTTGACATCGAGAGGATTGTTAATGTTGCATGGTATGT
GAACATGGTCTTCATGATGCCTATACAGATTACACTAGCAACTTATATTCTTTGGAAAAA
TCTTGGTCTGGGTTCTTTAGCTGGAATAGCAACAACAGCCATAATAATGCTTTGCAATAT
TCCTTTTACAAGAATCCAGAAAAGATTGCACGCAGGAATTATGAAAGCAAAAGATGACAG
AATGGACATGACATCTGAAGTTATAAGAAGCATGAAGATCTTAAAACTTCAAGCTTGGGA
TATCCAATACCTTAGGAAATTGGAATATTTGAGGAAAGGAGAACATTTGTGGTTGTGGGA
ATTTCTAAGACTAAAAGCACTACTAGCATTTATGTTCTGGGGAGCACCCGCTGTCATATC
AATCATGACATTTGCTTCATGCATTCTGATGGGAATCCCTCTAACAGCTGGAAGAGTGTT
GTCCACACTAGCAACTGTGAATATACTGAAGGAGCCTATCTTTAGTCTACCAGAATTGCT
TACTGCCTTTGCACAGGGGAAGATCTCAGCTGACAGAATAGTGTCATATCTCCAAGAAGA
AGAAATAAGATCTGATGCAATTGAGGAAGTAGCAATAGACGAAAATGAATTTTCTGCAGA
GATTGATCAGGGAGCATTCAGTTGGAAAACTGATGCAAAAATCCCAACACTTCAAGATAT
ACATGTAAAGATACACAAAGGGATGAAAGTGGCAGTATGTGGAGCTGTTGGGAGTGGAAA
ATCTAGCCTGTTGTCATGTGTACTTGGAGAGATGCCAAAAGTGCAAGGAACGGTTAAGGT
CTTTGGAACCAAAGCATATGTTCCACAGTCGTCATGGATACTTTCTGGGACTATTAGAGA
AAACATTCTCTTTGGGAGCCCATTTGAAACTGATAGGTATGAGCGGACAATTGAAGCATG
TGCCTTGGTTAAAGACATCGGAGTTTTCTCGGATGGTGATATGACAGATATAGGAGAACG
GGGAACGACTATGAGTGGGGGACAAAAGCAACGGATTCAAATAGCAAGAGCAGTTTACAA
GGATGCTGATGTCTACCTGTTTGATGATCCTTTCAGTGCTGTAGACCCTCAAACTGGGAG
GCATCTATACAAGAAATGCCTGATGGGGGTCCTAAGGGATAAAACTGTGTTATACGTCAC
GCACCAAGTTGAATTTCTAGTTGATGCAGACCTTATTATGGTGATGCAAAATGGAAGGAT
AGCACAAGCAGGGAAATTTCAAGAACTCCAACAGAACATGGCTTTTGGAGTTATCTTTGG
GGCTCACTTTTGTGCCGTCGAACAAGTTTGTAACGCAAAAGGCACAAGCATATATTTGTC
AAAGCATCATGCAGAATCAGAAAAGGTACCAAGCATCAATGAGTCCGATGCAGAAAAGGA
AATCAGCAGCAAATGGCAAAACACAAATATGATAAATTGCAGACAAGAAGTATTTAGAGA
TAACACTGAAGAAGGGAAATTGCTGCAGGGTGAAGAAAGAGAGAATGGATACATTAGCAA
GCAAGTGTATTGGTCATACCTCACAGCTGCTCGAGGTGGTCTTTTCATTCCTATGATAAT
TGCAGCACAATGCTTCTTTCAGATATTTGAAGTGGGAAGCAACTATTGGATGGCATCAGC
TTGCCATCCACGAACTGGAAGCAAATCAAAAATGGAATCCACCCAGTTCATGGTATATGT
ATTTATATCAGTTGGCAGCGCCTTGTGTATCTTGATTCGAGCAGTTCTTGTAGCTGTAAC
CGGCCTCCTCACATCAGAAAAATTGTTCAAGAGCATGATGCATTGCATCTTTCATGCTCC
TATGTCTTTCTTTGACTCGACACCTACAGGGCGAATCTTAAACAGGGCTTCGATTGATCA
AAGTGTGCTAGATTTGGAGACAGCGTCAACATTAAGTGAGAGCACATTTTCAGTGATGCA
GTTTCTAGGAACAATACTAATCATATCACATGTTTCCTGGCCAGTTCTCATTATTTTTAT
TCCATCAATATTGATTTGCATCAGGTATCAGAGATATTACAGTCTAACAGCAACAGAATT
AGCTCGCCTATCAGGAATTCAAAAGGCTCCAATTCTTCATCATTTTGGGGAAACTTTCTA
TGGAGCTGCAATAATTCGAGCATTTCGCCAAGAAGACCGGTTCTACAGATCAAATCTGAG
TCTACTTGACAATCATTCAAGACCATGGTTTCACTTGATGGCTGCAGTAGAATGGCTCTC
TTTCAGAATGAATTTGTTATGCAACTTTGTCTTTGGGTTCTCGTTGGTTTTGCTTGTGCG
TCTTCCACAAGGTTTTGTTAATCCAAGCATTGGTGGGCTGGTAGTGATGTATGCATGGAA
TTTGAATACACAATTATCAGAAGCCACCCGGAATATAAGTCGTGCAGAAGCAAACATGAT
ATCAGTTGAAAGAATATTACAGTACACAAAGCTTCCAAGTGAAGCCCCAACCATAACCGA
GGGTAGCAAGCCACCAATGGCATGGCCAGAGTTTGGCATGATAAGCATAAGCAACTTAGA
GGTCAGATATGCAGAACATCTCCCTTCAGTATTAAAAAACATAACTTGTGTGATTCCAGC
TGAGAAAACAGTAGGTATTGTTGGACGCACAGGTAGTGGGAAGTCAACCTTAGTACAAGT
ACTTTTTCGGATTGTTGAGCCAAGAGAAGGGACCATCAAGATTGACAGCATCGACATCTG
CAAAATTGGACTTCATGATCTGAGATCGAGAATATGTATTCTCCCACAGGATCCGGTGAT
GTTCGATGGTACAATCAGAGGAAATCTTGATCCCATGAACGAGTACCCAGATAGTAGGAT
ATGGGAGGTAGTAGACAAGTGTCAGCTTGGCAATGTGGTGCGCTCGACTGAGAAAAAGCT
GGATGAAATAGTAATTGAAAATGGGGACAACTGGAGCATGGGACAGCGACAACTATTTTG
TTTAGGCAGAATTCTCCTGAGGAAGAGCAAGATACTAGTCCTTGATGAGGCAACTGCTTC
AGTTGACTCTGCTACAGACCGGATTATTCAAGAGATAATTCGTCAAGAATTCAAAGATTG
CACAGTGCTTGCAATTGCCCATAGGATGAACACTGTTATTGATAGTGACCTTATTCTTGT
TCTTGGTGAAGGTAGTATTTTAGAATACGACACCCCCACCAAACTGCTCCAGAGAGAGGA
CTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGGACTTCAAGTCTTC
AACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTACAT
GGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGCAG
GGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAATAG
CAAAACAGCGTAAATGATTAATTTACAGAA

consensusID : consensus_490#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 460
fasta sequence 
                              [ACAATACTAAAACAACCTCAGAATATCATGTTGCACAGCTACGTCACTCTTTAAATCTGATATCTCTATGCAGGTAGTATTTTAGAATACGACGCCCCCACCAAACTGCTCCAGAGAGAGGACTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGCACTTCAAGTCTTCAACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTACATGGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGCAGGGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAATAGCAAAACAGCGTAAATGATTAATTTACAGAAAAATGGCACTATCTTNNAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAA]

[+] EMBL BE040085             [ACAATACTAAAACAACCTCAGAATATCATGTTGCACAGCTACGTCACTCTTTAAATCTGATATCTCTATGCAGGTAGTATTTTAGAATACGACGCCCCCACCAAACTGCTCCAGAGAGAGGACTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGCACTTCAAGTCTTCAACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTACATGGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGCAGGGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAATAGCAAAACAGCGTAAATGATTAATTTACAGAAAAATGGCACTATCTTNNAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAA]




>consensus_490#1
ACAATACTAAAACAACCTCAGAATATCATGTTGCACAGCTACGTCACTCTTTAAATCTGA
TATCTCTATGCAGGTAGTATTTTAGAATACGACGCCCCCACCAAACTGCTCCAGAGAGAG
GACTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGCACTTCAAGTCT
TCAACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTAC
ATGGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGC
AGGGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAAT
AGCAAAACAGCGTAAATGATTAATTTACAGAAAAATGGCACTATCTTNNAAAAAAAAAAA
AAAANAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_490#0      GTGCTAAGTTGTAAGCTGATTTACACTAATGTTACTGTTCAGCAGCTAAGGACAATCTCT 60
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AGTCGAAACAGTAGCTGAAGCCAACGGCTTCAACATGGTGTACAAAGAAACTGCAAATCA 120
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      ATCAGGGATCCAATTCACCTGCGGCACACAAGAACCATTTCCAGATGCTTCAAAAGAAGA 180
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AAATGTGAAAAACAGGAGGAAATCTTCTTATGGAGAGGCAACTATTTCACAACATTTCAC 240
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TTTCTCTTGGATGAATGGTCTTCTTGCTAAAGGTGCCAATAAGCCTTTGAATGAGGATGA 300
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      CATACCAGATGTTGGTGAGGAGGAAAGTGCCCAACACATCTCCAGAATATTCAGTAATAT 360
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      CATTGTGAAAGGGAATTTTCCTCTGACAGTTTCATCGATTTGTAAAGCAGCCTTCCTTCT 420
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      CATTTGGAAGAAGGCGGCACTCAATGCAACCTTTGGAGTCCTAAGTGTAGTCGCCTCCTT 480
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TGTGGGGGCATACTTAATCAAGGACTTCGTGGGCTATCTAAGTGGAGATAATGGATTTGA 540
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AAGAGGCTACTCTCTTGTTCTTGTATTTGTAGGTGCGAAGGCTATTGAAACTCTTGCTTA 600
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      CAGACAATGGTTCTTTGGAAGTCTACAGGTTTATTTGCGCCTAAGAACATCTCTGATATC 660
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TCAGGTATACCAAAAGGTCCTTTATTTATCAAGCCAGTCAAGGCAGAAACATACCTCAGG 720
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GGAGATAATTAACTATGTGAGTGTTGACATCGAGAGGATTGTTAATGTTGCATGGTATGT 780
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GAACATGGTCTTCATGATGCCTATACAGATTACACTAGCAACTTATATTCTTTGGAAAAA 840
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TCTTGGTCTGGGTTCTTTAGCTGGAATAGCAACAACAGCCATAATAATGCTTTGCAATAT 900
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TCCTTTTACAAGAATCCAGAAAAGATTGCACGCAGGAATTATGAAAGCAAAAGATGACAG 960
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AATGGACATGACATCTGAAGTTATAAGAAGCATGAAGATCTTAAAACTTCAAGCTTGGGA 1020
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TATCCAATACCTTAGGAAATTGGAATATTTGAGGAAAGGAGAACATTTGTGGTTGTGGGA 1080
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      ATTTCTAAGACTAAAAGCACTACTAGCATTTATGTTCTGGGGAGCACCCGCTGTCATATC 1140
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AATCATGACATTTGCTTCATGCATTCTGATGGGAATCCCTCTAACAGCTGGAAGAGTGTT 1200
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GTCCACACTAGCAACTGTGAATATACTGAAGGAGCCTATCTTTAGTCTACCAGAATTGCT 1260
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TACTGCCTTTGCACAGGGGAAGATCTCAGCTGACAGAATAGTGTCATATCTCCAAGAAGA 1320
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AGAAATAAGATCTGATGCAATTGAGGAAGTAGCAATAGACGAAAATGAATTTTCTGCAGA 1380
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GATTGATCAGGGAGCATTCAGTTGGAAAACTGATGCAAAAATCCCAACACTTCAAGATAT 1440
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      ACATGTAAAGATACACAAAGGGATGAAAGTGGCAGTATGTGGAGCTGTTGGGAGTGGAAA 1500
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      ATCTAGCCTGTTGTCATGTGTACTTGGAGAGATGCCAAAAGTGCAAGGAACGGTTAAGGT 1560
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      CTTTGGAACCAAAGCATATGTTCCACAGTCGTCATGGATACTTTCTGGGACTATTAGAGA 1620
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AAACATTCTCTTTGGGAGCCCATTTGAAACTGATAGGTATGAGCGGACAATTGAAGCATG 1680
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TGCCTTGGTTAAAGACATCGGAGTTTTCTCGGATGGTGATATGACAGATATAGGAGAACG 1740
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GGGAACGACTATGAGTGGGGGACAAAAGCAACGGATTCAAATAGCAAGAGCAGTTTACAA 1800
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GGATGCTGATGTCTACCTGTTTGATGATCCTTTCAGTGCTGTAGACCCTCAAACTGGGAG 1860
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GCATCTATACAAGAAATGCCTGATGGGGGTCCTAAGGGATAAAACTGTGTTATACGTCAC 1920
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GCACCAAGTTGAATTTCTAGTTGATGCAGACCTTATTATGGTGATGCAAAATGGAAGGAT 1980
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AGCACAAGCAGGGAAATTTCAAGAACTCCAACAGAACATGGCTTTTGGAGTTATCTTTGG 2040
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GGCTCACTTTTGTGCCGTCGAACAAGTTTGTAACGCAAAAGGCACAAGCATATATTTGTC 2100
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AAAGCATCATGCAGAATCAGAAAAGGTACCAAGCATCAATGAGTCCGATGCAGAAAAGGA 2160
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AATCAGCAGCAAATGGCAAAACACAAATATGATAAATTGCAGACAAGAAGTATTTAGAGA 2220
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TAACACTGAAGAAGGGAAATTGCTGCAGGGTGAAGAAAGAGAGAATGGATACATTAGCAA 2280
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GCAAGTGTATTGGTCATACCTCACAGCTGCTCGAGGTGGTCTTTTCATTCCTATGATAAT 2340
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TGCAGCACAATGCTTCTTTCAGATATTTGAAGTGGGAAGCAACTATTGGATGGCATCAGC 2400
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TTGCCATCCACGAACTGGAAGCAAATCAAAAATGGAATCCACCCAGTTCATGGTATATGT 2460
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      ATTTATATCAGTTGGCAGCGCCTTGTGTATCTTGATTCGAGCAGTTCTTGTAGCTGTAAC 2520
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      CGGCCTCCTCACATCAGAAAAATTGTTCAAGAGCATGATGCATTGCATCTTTCATGCTCC 2580
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TATGTCTTTCTTTGACTCGACACCTACAGGGCGAATCTTAAACAGGGCTTCGATTGATCA 2640
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AAGTGTGCTAGATTTGGAGACAGCGTCAACATTAAGTGAGAGCACATTTTCAGTGATGCA 2700
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GTTTCTAGGAACAATACTAATCATATCACATGTTTCCTGGCCAGTTCTCATTATTTTTAT 2760
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TCCATCAATATTGATTTGCATCAGGTATCAGAGATATTACAGTCTAACAGCAACAGAATT 2820
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AGCTCGCCTATCAGGAATTCAAAAGGCTCCAATTCTTCATCATTTTGGGGAAACTTTCTA 2880
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TGGAGCTGCAATAATTCGAGCATTTCGCCAAGAAGACCGGTTCTACAGATCAAATCTGAG 2940
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TCTACTTGACAATCATTCAAGACCATGGTTTCACTTGATGGCTGCAGTAGAATGGCTCTC 3000
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TTTCAGAATGAATTTGTTATGCAACTTTGTCTTTGGGTTCTCGTTGGTTTTGCTTGTGCG 3060
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TCTTCCACAAGGTTTTGTTAATCCAAGCATTGGTGGGCTGGTAGTGATGTATGCATGGAA 3120
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TTTGAATACACAATTATCAGAAGCCACCCGGAATATAAGTCGTGCAGAAGCAAACATGAT 3180
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      ATCAGTTGAAAGAATATTACAGTACACAAAGCTTCCAAGTGAAGCCCCAACCATAACCGA 3240
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GGGTAGCAAGCCACCAATGGCATGGCCAGAGTTTGGCATGATAAGCATAAGCAACTTAGA 3300
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GGTCAGATATGCAGAACATCTCCCTTCAGTATTAAAAAACATAACTTGTGTGATTCCAGC 3360
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TGAGAAAACAGTAGGTATTGTTGGACGCACAGGTAGTGGGAAGTCAACCTTAGTACAAGT 3420
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      ACTTTTTCGGATTGTTGAGCCAAGAGAAGGGACCATCAAGATTGACAGCATCGACATCTG 3480
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      CAAAATTGGACTTCATGATCTGAGATCGAGAATATGTATTCTCCCACAGGATCCGGTGAT 3540
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GTTCGATGGTACAATCAGAGGAAATCTTGATCCCATGAACGAGTACCCAGATAGTAGGAT 3600
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      ATGGGAGGTAGTAGACAAGTGTCAGCTTGGCAATGTGGTGCGCTCGACTGAGAAAAAGCT 3660
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      GGATGAAATAGTAATTGAAAATGGGGACAACTGGAGCATGGGACAGCGACAACTATTTTG 3720
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      TTTAGGCAGAATTCTCCTGAGGAAGAGCAAGATACTAGTCCTTGATGAGGCAACTGCTTC 3780
consensus_490#1      ------------------------------------------------------------
                                                                                 

consensus_490#0      AGTTGACTCTGCTACAGACCGGATTATTCAAGAGATAATTCGTCAAGAATTCAAAGATTG 3840
consensus_490#1      --------------------------------------------------ACAATACTAA 10
                                                                        ***   *  

consensus_490#0      CACAGTGCTTGCAATTGCCCATAGGATGAACACTGTTATTGATAGTGACCTTATTCTTGT 3900
consensus_490#1      AACAAC-CTCAGAATATCATGTTGCACAGCTAC-GTCACTCTTTA-AATCTGAT-----A 62
                      ***   **   ***  *   * * *     ** ** * *  *    * ** **      

consensus_490#0      TCTTGGTGAAGGTAGTATTTTAGAATACGACACCCCCACCAAACTGCTCCAGAGAGAGGA 3960
consensus_490#1      TCTCTATGCAGGTAGTATTTTAGAATACGACGCCCCCACCAAACTGCTCCAGAGAGAGGA 122
                     ***   ** ********************** ****************************

consensus_490#0      CTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGGACTTCAAGTCTTC 4020
consensus_490#1      CTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGCACTTCAAGTCTTC 182
                     ********************************************** *************

consensus_490#0      AACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTACAT 4080
consensus_490#1      AACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTACAT 242
                     ************************************************************

consensus_490#0      GGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGCAG 4140
consensus_490#1      GGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGCAG 302
                     ************************************************************

consensus_490#0      GGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAATAG 4200
consensus_490#1      GGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAATAG 362
                     ************************************************************

consensus_490#0      CAAAACAGCGTAAATGATTAATTTACAGAA------------------------------ 4230
consensus_490#1      CAAAACAGCGTAAATGATTAATTTACAGAAAAATGGCACTATCTTNNAAAAAAAAAAAAA 422
                     ******************************                              

consensus_490#0      --------------------------------------
consensus_490#1      AANAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAA 460


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)