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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4905 cluster # 4905       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4905#0 length = 1013 sequences # 3  

consensusID : consensus_4905#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1013
fasta sequence
                              [GTCGTCGTCCTCACCGCCGGCGCC-GNANCGA-TGGCCATGG-CGCAGCCACCCCCGTACTCCTCCTCCTCCGCCGTTCCGCCACCATCTTACTCCCTCGATCTCGATCTCCGCGCGCCTCCGCTTG-NTCTTGGCGCCGCAGCGANGGAGGGGGAGAAGGTGGCGGCTGCTCCGATCGTCGCCGCCTCCCGAA-GGTNCCCCGGCGAACTCATGGAGGAGGAGGAGGACTCCAAGTTCGTGCCGCTGAACGCCGAGGATCCCATGTACGGACCGCCGGCGCTGTTGCTCATCGGATTCGAGGAAGGCGAAACCAACAAGGTTCAGGAG-TTCCTGAGAGAGCTTGACGGAGAATTTCTCAAGGTGATTCATTGTACAGAAGAAATGACAAAGNAAACGTTGTGGGATGCCATGCACACTGAGCAACCTAGTATAGAAGCTGTCAAGATTGCAAAGTCAATGCCAAGAATTTGTATATTTTCT-GCCTGACTGGTGAAGAGATGATGATGTTCATCAATTCCTACCCAGAAACTGGGTTGGAGCCAGCTGCTTTTGCAGCACTTGTTCCTAACAGTGCAGACAAGATTCTTGGTGAGGTGATCGAGGAAATAATGGGTGACCACGAGATGCTGGAACGAATTAGCAATGAAGAGAATCTAATGTAGCCACTGGGCTAAGCTGATGGAAAGGCCCATGAAGAGAAATCAGGCAGCAGTGATCAAACTCACCTACTGAAATCACCAGCTCCAAGTGTTAGGATTATATGTGTAAACTAGGATTTTTTTCCTTAAATGGCGTCGGTGCCAAAAGTATTAGAGTCGTGGGTGCATTACTCTACGTCAGTACCTACAATGCCTACAATTAAGATGGGAAGGCTCTAAGAATCAGAGGGAGATTAACCATGTCAAACATGAACCATAATGGCTCAAATGGTGGTTGGCTGATGGATATGGTCAGATTGCTAGAGTTCTCTGTAAGAACATGCATAAGAGATTAAGAGATGTTCCTTCTCAGATTTT]

[+] EMBL OSS15287A            [GTCGTCGTCCTCACCGCCGGCGCC GNANCGANTGGCCATGG CGCAGCCACCCCCGTACTCCTCCTCCTCCGCCGTTCCGCCACCATCTTACTCCCTCGATCTCGATCTCCGCGCGCCTCCGCTTG NTCTTGGCGCCGCAGCGANGGAGGGGGAGAAGGTGGCGGCTGCTCCGATCGTCGCCGCCTCCCGAA GGTNCCCCGGCGAACTCATGGAGGAGGAGGAGGACTCCAAGTTCGTGCCGCTGAACGCCGAGGATCCCATGTACGGACCGCCGGCGCTGTTGCTCATCGGATTCGAGGAAGGCGAAACCAACAAGGTTCAGGAGTTTCCTGAGAGAGCTTGACGGAGAATTTCTCAAGGTGATTCATTGTACAGAAGAAATGACAAAGNAAACGTTGTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BE230623             [           CACCGCCGGCGCCGGCGACGA TGGCCATGGCCGCAGCCACCCCCGTACTCCTCCTCCTCCGCCGTTCCGCCACCATATTACTCCCTCGATCTCGATCTCCGCGCGCCTCCGCTTGCGTCTTGGCGCCGCAGCGGAGGAGGGGGAGAAGGTGGCGGCTGCTCCGATCGTCGCCGCCTCCCGAAGGGGTCCCCGGCGAACTCATGGAGGAGGAGGAGGACTCCAAGTTCGTGCCGCTGAACGCCGAGGATCCCATGTACGGACCGCCGGCGCTGTTGCTCATCGGATTCGAGGAAGGCGAAACCAACAAGGTTCAGGAG TTCCTGAGAGAGCTTGACGGAGAATTTCTCAAGGTGATTCATTGTACAGAAGAAATGACAAAGCAAACGTTGTGGGATGCCATGCACACTGAGCAACCTAGTATAGAAGCTGTCAAGATTGCAAAGTCAATGCCAAGAATTTGTATATTTTCT GCCTGACTGGTGAAGAGATGATGATGTTCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA765892             [                                                                                                                                                                                                                                                                                                                                                                                                                      ATGCCATGCACACTGAGCAACCTAGTATAGAAGCTGTCAAGATTGCAAAGTCAATGCCAAGAATTTGTATATTTTCTGGCCTGACTGGTGAAGAGATGATGATGTTCATCAATTCCTACCCAGAAACTGGGTTGGAGCCAGCTGCTTTTGCAGCACTTGTTCCTAACAGTGCAGACAAGATTCTTGGTGAGGTGATCGAGGAAATAATGGGTGACCACGAGATGCTGGAACGAATTAGCAATGAAGAGAATCTAATGTAGCCACTGGGCTAAGCTGATGGAAAGGCCCATGAAGAGAAATCAGGCAGCAGTGATCAAACTCACCTACTGAAATCACCAGCTCCAAGTGTTAGGATTATATGTGTAAACTAGGATTTTTTTCCTTAAATGGCGTCGGTGCCAAAAGTATTAGAGTCGTGGGTGCATTACTCTACGTCAGTACCTACAATGCCTACAATTAAGATGGGAAGGCTCTAAGAATCAGAGGGAGATTAACCATGTCAAACATGAACCATAATGGCTCAAATGGTGGTTGGCTGATGGATATGGTCAGATTGCTAGAGTTCTCTGTAAGAACATGCATAAGAGATTAAGAGATGTTCCTTCTCAGATTTT]


>consensus_4905#0 GTCGTCGTCCTCACCGCCGGCGCCGNANCGATGGCCATGGCGCAGCCACCCCCGTACTCC TCCTCCTCCGCCGTTCCGCCACCATCTTACTCCCTCGATCTCGATCTCCGCGCGCCTCCG CTTGNTCTTGGCGCCGCAGCGANGGAGGGGGAGAAGGTGGCGGCTGCTCCGATCGTCGCC GCCTCCCGAAGGTNCCCCGGCGAACTCATGGAGGAGGAGGAGGACTCCAAGTTCGTGCCG CTGAACGCCGAGGATCCCATGTACGGACCGCCGGCGCTGTTGCTCATCGGATTCGAGGAA GGCGAAACCAACAAGGTTCAGGAGTTCCTGAGAGAGCTTGACGGAGAATTTCTCAAGGTG ATTCATTGTACAGAAGAAATGACAAAGNAAACGTTGTGGGATGCCATGCACACTGAGCAA CCTAGTATAGAAGCTGTCAAGATTGCAAAGTCAATGCCAAGAATTTGTATATTTTCTGCC TGACTGGTGAAGAGATGATGATGTTCATCAATTCCTACCCAGAAACTGGGTTGGAGCCAG CTGCTTTTGCAGCACTTGTTCCTAACAGTGCAGACAAGATTCTTGGTGAGGTGATCGAGG AAATAATGGGTGACCACGAGATGCTGGAACGAATTAGCAATGAAGAGAATCTAATGTAGC CACTGGGCTAAGCTGATGGAAAGGCCCATGAAGAGAAATCAGGCAGCAGTGATCAAACTC ACCTACTGAAATCACCAGCTCCAAGTGTTAGGATTATATGTGTAAACTAGGATTTTTTTC CTTAAATGGCGTCGGTGCCAAAAGTATTAGAGTCGTGGGTGCATTACTCTACGTCAGTAC CTACAATGCCTACAATTAAGATGGGAAGGCTCTAAGAATCAGAGGGAGATTAACCATGTC AAACATGAACCATAATGGCTCAAATGGTGGTTGGCTGATGGATATGGTCAGATTGCTAGA GTTCTCTGTAAGAACATGCATAAGAGATTAAGAGATGTTCCTTCTCAGATTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)