These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4905#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1013 fasta sequence [GTCGTCGTCCTCACCGCCGGCGCC-GNANCGA-TGGCCATGG-CGCAGCCACCCCCGTACTCCTCCTCCTCCGCCGTTCCGCCACCATCTTACTCCCTCGATCTCGATCTCCGCGCGCCTCCGCTTG-NTCTTGGCGCCGCAGCGANGGAGGGGGAGAAGGTGGCGGCTGCTCCGATCGTCGCCGCCTCCCGAA-GGTNCCCCGGCGAACTCATGGAGGAGGAGGAGGACTCCAAGTTCGTGCCGCTGAACGCCGAGGATCCCATGTACGGACCGCCGGCGCTGTTGCTCATCGGATTCGAGGAAGGCGAAACCAACAAGGTTCAGGAG-TTCCTGAGAGAGCTTGACGGAGAATTTCTCAAGGTGATTCATTGTACAGAAGAAATGACAAAGNAAACGTTGTGGGATGCCATGCACACTGAGCAACCTAGTATAGAAGCTGTCAAGATTGCAAAGTCAATGCCAAGAATTTGTATATTTTCT-GCCTGACTGGTGAAGAGATGATGATGTTCATCAATTCCTACCCAGAAACTGGGTTGGAGCCAGCTGCTTTTGCAGCACTTGTTCCTAACAGTGCAGACAAGATTCTTGGTGAGGTGATCGAGGAAATAATGGGTGACCACGAGATGCTGGAACGAATTAGCAATGAAGAGAATCTAATGTAGCCACTGGGCTAAGCTGATGGAAAGGCCCATGAAGAGAAATCAGGCAGCAGTGATCAAACTCACCTACTGAAATCACCAGCTCCAAGTGTTAGGATTATATGTGTAAACTAGGATTTTTTTCCTTAAATGGCGTCGGTGCCAAAAGTATTAGAGTCGTGGGTGCATTACTCTACGTCAGTACCTACAATGCCTACAATTAAGATGGGAAGGCTCTAAGAATCAGAGGGAGATTAACCATGTCAAACATGAACCATAATGGCTCAAATGGTGGTTGGCTGATGGATATGGTCAGATTGCTAGAGTTCTCTGTAAGAACATGCATAAGAGATTAAGAGATGTTCCTTCTCAGATTTT] [+] EMBL OSS15287A [GTCGTCGTCCTCACCGCCGGCGCC GNANCGANTGGCCATGG CGCAGCCACCCCCGTACTCCTCCTCCTCCGCCGTTCCGCCACCATCTTACTCCCTCGATCTCGATCTCCGCGCGCCTCCGCTTG NTCTTGGCGCCGCAGCGANGGAGGGGGAGAAGGTGGCGGCTGCTCCGATCGTCGCCGCCTCCCGAA GGTNCCCCGGCGAACTCATGGAGGAGGAGGAGGACTCCAAGTTCGTGCCGCTGAACGCCGAGGATCCCATGTACGGACCGCCGGCGCTGTTGCTCATCGGATTCGAGGAAGGCGAAACCAACAAGGTTCAGGAGTTTCCTGAGAGAGCTTGACGGAGAATTTCTCAAGGTGATTCATTGTACAGAAGAAATGACAAAGNAAACGTTGTGGG ] [+] EMBL BE230623 [ CACCGCCGGCGCCGGCGACGA TGGCCATGGCCGCAGCCACCCCCGTACTCCTCCTCCTCCGCCGTTCCGCCACCATATTACTCCCTCGATCTCGATCTCCGCGCGCCTCCGCTTGCGTCTTGGCGCCGCAGCGGAGGAGGGGGAGAAGGTGGCGGCTGCTCCGATCGTCGCCGCCTCCCGAAGGGGTCCCCGGCGAACTCATGGAGGAGGAGGAGGACTCCAAGTTCGTGCCGCTGAACGCCGAGGATCCCATGTACGGACCGCCGGCGCTGTTGCTCATCGGATTCGAGGAAGGCGAAACCAACAAGGTTCAGGAG TTCCTGAGAGAGCTTGACGGAGAATTTCTCAAGGTGATTCATTGTACAGAAGAAATGACAAAGCAAACGTTGTGGGATGCCATGCACACTGAGCAACCTAGTATAGAAGCTGTCAAGATTGCAAAGTCAATGCCAAGAATTTGTATATTTTCT GCCTGACTGGTGAAGAGATGATGATGTTCATCA ] [+] EMBL CA765892 [ ATGCCATGCACACTGAGCAACCTAGTATAGAAGCTGTCAAGATTGCAAAGTCAATGCCAAGAATTTGTATATTTTCTGGCCTGACTGGTGAAGAGATGATGATGTTCATCAATTCCTACCCAGAAACTGGGTTGGAGCCAGCTGCTTTTGCAGCACTTGTTCCTAACAGTGCAGACAAGATTCTTGGTGAGGTGATCGAGGAAATAATGGGTGACCACGAGATGCTGGAACGAATTAGCAATGAAGAGAATCTAATGTAGCCACTGGGCTAAGCTGATGGAAAGGCCCATGAAGAGAAATCAGGCAGCAGTGATCAAACTCACCTACTGAAATCACCAGCTCCAAGTGTTAGGATTATATGTGTAAACTAGGATTTTTTTCCTTAAATGGCGTCGGTGCCAAAAGTATTAGAGTCGTGGGTGCATTACTCTACGTCAGTACCTACAATGCCTACAATTAAGATGGGAAGGCTCTAAGAATCAGAGGGAGATTAACCATGTCAAACATGAACCATAATGGCTCAAATGGTGGTTGGCTGATGGATATGGTCAGATTGCTAGAGTTCTCTGTAAGAACATGCATAAGAGATTAAGAGATGTTCCTTCTCAGATTTT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||