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Oryza sativa
cluster # 4909 cluster # 4909       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4909#0 length = 1386 sequences # 3  

consensusID : consensus_4909#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1386
fasta sequence
                              [CGCGCGCTGTTCCGGCCGCCGCCGAGCTGGTCGGAGTCGGAGGCGACCGCCGATAGCCCTGCCGGCGAGAGATCGATCGATCGGCGTCGCCGATCCGACATATCCAATGGTTGAGTCGGGGAGCGAGGCGGCGGCGGCGACGGCGGCGGCGGTGCTGACGGCGCCGCTGTCCCTGGAGGGCGGCCTCGCGGCGGAGCTCCGGCCGGCGAACCTCGTGCAGCGCGTGCTCAGCCTCTTCCGCAACGTCCGACCCGGCTCCGATCTCTCTCACTTTCAGCTGCCTGCTACGTTCAACCTGCCGAAGTCGCAGCTCCAGTTATACGGCGAGGGAGTGTACTGCGTCGGAAAAGACTACCTGCGGCGGTGCGCGAAGGGGAGCGACGCCGTCGAGCGGTTCGCGGCGGTCGTCGGCTGGAGCATCTCGACGACGAGGCCTCCCATCTTCGGCTTCGCGCCGTACAACCCCGTTCTTGGAGAGACCCACCATGTCTCCAGCGGATCACTCCATGTTCTTCTCGAGCAGGTGTCTCATCGTCCTCCGGTCTCTGCACTGCATGCCACTGACGATGACGGTGAGATCGAGCTCGTCTGGTGCCAAAACCCAATCCCGAAATTCCACGGCACAAGCGTGGAAGCGACAGTGAAAGGCATGAGGCACGTCAAGCTTCTGAAATTCAGCGAGAATTACGAGATCGACTGCCCAAACCTGCTCATCAGGTTGCTGCCTGCTCCATCAGCGGAGTGGTCTGGGACAGTCAGGATCGTCTGCAAGGAGTCCGAGCTCGAAGCAGAGTTGATCTACTACAGGAGCAACGCTTTCCTGGGACTAGGTGGCGATCCAAGATGTGTTAAGGGTAAGATATTCAGCTCAAGATCAGGAGAGATCATCTGCGAGATTGATGGACATTGGGATCGGATCGTGTCGGCGAAGGATGCGAAGACCGGGAAGGTGTCGGTTCTGTACGATGCTGAATCCGCCATTGCTGACCTCAAGACACCTGTGGTCAGAAACCAAGAGGGCGTGTCACCTTCAGAATCTGTGGTGGTTTGGGGCGAGGTGAGCGATGCCATCCTGAAGAAAGACTGGGAGAGATCTAGTCAGGCGAAGCGACGAGTGGAGGACACGGCGAGGAGGCTAGACAGAGAGAGGAACGACAAGGGAGAGGTCTGGATTCCCAAGCATTTCTCGCTGTCTCAGGACAAGAACGGCAGCTGGGAATGCTCGCCGCTGGAGAAATCTGTGCCTCCAGCTCCGATCATTGTCCCCTCATGACTGTAGATTACATGTAACAGATGATCCTATATATACTATATAAATCTATAACATAGCTGATGATTTGATTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071151             [CGCGCGCTGTTCCGGCCGCCGCCGAGCTGGTCGGAGTCGGAGGCGACCGCCGATAGCCCTGCCGGCGAGAGATCGATCGATCGGCGTCGCCGATCCGACATATCCAATGGTTGAGTCGGGGAGCGAGGCGGCGGCGGCGACGGCGGCGGCGGTGCTGACGGCGCCGCTGTCCCTGGAGGGCGGCCTCGCGGCGGAGCTCCGGCCGGCGAACCTCGTGCAGCGCGTGCTCAGCCTCTTCCGCAACGTCCGACCCGGCTCCGATCTCTCTCACTTTCAGCTGCCTGCTACGTTCAACCTGCCGAAGTCGCAGCTCCAGTTATACGGCGAGGGAGTGTACTGCGTCGGAAAAGACTACCTGCGGCGGTGCGCGAAGGGGAGCGACGCCGTCGAGCGGTTCGCGGCGGTCGTCGGCTGGAGCATCTCGACGACGAGGCCTCCCATCTTCGGCTTCGCGCCGTACAACCCCGTTCTTGGAGAGACCCACCATGTCTCCAGCGGATCACTCCATGTTCTTCTCGAGCAGGTGTCTCATCGTCCTCCGGTCTCTGCACTGCATGCCACTGACGATGACGGTGAGATCGAGCTCGTCTGGTGCCAAAACCCAATCCCGAAATTCCACGGCACAAGCGTGGAAGCGACAGTGAAAGGCATGAGGCACGTCAAGCTTCTGAAATTCAGCGAGAATTACGAGATCGACTGCCCAAACCTGCTCATCAGGTTGCTGCCTGCTCCATCAGCGGAGTGGTCTGGGACAGTCAGGATCGTCTGCAAGGAGTCCGAGCTCGAAGCAGAGTTGATCTACTACAGGAGCAACGCTTTCCTGGGACTAGGTGGCGATCCAAGATGTGTTAAGGGTAAGATATTCAGCTCAAGATCAGGAGAGATCATCTGCGAGATTGATGGACATTGGGATCGGATCGTGTCGGCGAAGGATGCGAAGACCGGGAAGGTGTCGGTTCTGTACGATGCTGAATCCGCCATTGCTGACCTCAAGACACCTGTGGTCAGAAACCAAGAGGGCGTGTCACCTTCAGAATCTGTGGTGGTTTGGGGCGAGGTGAGCGATGCCATCCTGAAGAAAGACTGGGAGAGATCTAGTCAGGCGAAGCGACGAGTGGAGGACACGGCGAGGAGGCTAGACAGAGAGAGGAACGACAAGGGAGAGGTCTGGATTCCCAAGCATTTCTCGCTGTCTCAGGACAAGAACGGCAGCTGGGAATGCTCGCCGCTGGAGAAATCTGTGCCTCCAGCTCCGATCATTGTCCCCTCATGACTGTAGATTACATGTAACAGATGATCCTATATATACTATATAAATCTATAACATAGCTGATG                                                   ]
[+] EMBL AK106135             [                                                                                                         gcaGGTTGAGTCGGGGAGCGAGGCGGCGGCGGCGACGGCGGCGGCGGTGCTGACGGCGCCGCTGTCCCTGGAGGGCGGCCTCGCGGCGGAGCTCCGGCCGGCGAACCTCGTGCAGCGCGTGCTCAGCCTCTTCCGCAACGTCCGACCCGGCTCCGATCTCTCTCACTTTCAGCTGCCTGCTACGTTCAACCTGCCGAAGTCGCAGCTCCAGTTATACGGCGAGGGAGTGTACTGCGTCGGAAAAGACTACCTGCGGCGGTGCGCGAAGGGGAGCGACGCCGTCGAGCGGTTCGCGGCGGTCGTCGGCTGGAGCATCTCGACGACGAGGCCTCCCATCTTCGGCTTCGCGCCGTACAACCCCGTTCTTGGAGAGACCCACCATGTCTCCAGCGGATCACTCCATGTTCTTCTCGAGCAGGTGTCTCATCGTCCTCCGGTCTCTGCACTGCATGCCACTGACGATGACGGTGAGATCGAGCTCGTCTGGTGCCAAAACCCAATCCCGAAATTCCACGGCACAAGCGTGGAAGCGACAGTGAAAGGCATGAGGCACGTCAAGCTTCTGAAATTCAGCGAGAATTACGAGATCGACTGCCCAAACCTGCTCATCAGGTTGCTGCCTGCTCCATCAGCGGAGTGGTCTGGGACAGTCAGGATCGTCTGCAAGGAGTCCGAGCTCGAAGCAGAGTTGATCTACTACAGGAGCAACGCTTTCCTGGGACTAGGTGGCGATCCAAGATGTGTTAAGGGTAAGATATTCAGCTCAAGATCAGGAGAGATCATCTGCGAGATTGATGGACATTGGGATCGGATCGTGTCGGCGAAGGATGCGAAGACCGGGAAGGTGTCGGTTCTGTACGATGCTGAATCCGCCATTGCTGACCTCAAGACACCTGTGGTCAGAAACCAAGAGGGCGTGTCACCTTCAGAATCTGTGGTGGTTTGGGGCGAGGTGAGCGATGCCATCCTGAAGAAAGACTGGGAGAGATCTAGTCAGGCGAAGCGACGAGTGGAGGACACGGCGAGGAGGCTAGACAGAGAGAGGAACGACAAGGGAGAGGTCTGGATTCCCAAGCATTTCTCGCTGTCTCAGGACAAGAACGGCAGCTGGGAATGCTCGCCGCTGGAGAAATCTGTGCCTCCAGCTCCGATCATTGTCCCCTCATGACTGTAGATTACATGTAACAGATGATCCTATATATACTATATAAATCTATAACATAGCTGATGA                                                  ]
[+] EMBL AU165665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAGGTCTGGATTCCCAAGCATTTCTCGCTGTCTCAGGACAAGAACGGCAGCTGGGAATGCTCGCCGCTGGAGAAATCTGTGCCTCCAGCTCCGATCATTGTCCCCTCATGACTGTAGATTACATGTAACANATGATCCTATATATACTATATAANTCTATAACATAGCTGATGATTTGATTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_4909#0 CGCGCGCTGTTCCGGCCGCCGCCGAGCTGGTCGGAGTCGGAGGCGACCGCCGATAGCCCT GCCGGCGAGAGATCGATCGATCGGCGTCGCCGATCCGACATATCCAATGGTTGAGTCGGG GAGCGAGGCGGCGGCGGCGACGGCGGCGGCGGTGCTGACGGCGCCGCTGTCCCTGGAGGG CGGCCTCGCGGCGGAGCTCCGGCCGGCGAACCTCGTGCAGCGCGTGCTCAGCCTCTTCCG CAACGTCCGACCCGGCTCCGATCTCTCTCACTTTCAGCTGCCTGCTACGTTCAACCTGCC GAAGTCGCAGCTCCAGTTATACGGCGAGGGAGTGTACTGCGTCGGAAAAGACTACCTGCG GCGGTGCGCGAAGGGGAGCGACGCCGTCGAGCGGTTCGCGGCGGTCGTCGGCTGGAGCAT CTCGACGACGAGGCCTCCCATCTTCGGCTTCGCGCCGTACAACCCCGTTCTTGGAGAGAC CCACCATGTCTCCAGCGGATCACTCCATGTTCTTCTCGAGCAGGTGTCTCATCGTCCTCC GGTCTCTGCACTGCATGCCACTGACGATGACGGTGAGATCGAGCTCGTCTGGTGCCAAAA CCCAATCCCGAAATTCCACGGCACAAGCGTGGAAGCGACAGTGAAAGGCATGAGGCACGT CAAGCTTCTGAAATTCAGCGAGAATTACGAGATCGACTGCCCAAACCTGCTCATCAGGTT GCTGCCTGCTCCATCAGCGGAGTGGTCTGGGACAGTCAGGATCGTCTGCAAGGAGTCCGA GCTCGAAGCAGAGTTGATCTACTACAGGAGCAACGCTTTCCTGGGACTAGGTGGCGATCC AAGATGTGTTAAGGGTAAGATATTCAGCTCAAGATCAGGAGAGATCATCTGCGAGATTGA TGGACATTGGGATCGGATCGTGTCGGCGAAGGATGCGAAGACCGGGAAGGTGTCGGTTCT GTACGATGCTGAATCCGCCATTGCTGACCTCAAGACACCTGTGGTCAGAAACCAAGAGGG CGTGTCACCTTCAGAATCTGTGGTGGTTTGGGGCGAGGTGAGCGATGCCATCCTGAAGAA AGACTGGGAGAGATCTAGTCAGGCGAAGCGACGAGTGGAGGACACGGCGAGGAGGCTAGA CAGAGAGAGGAACGACAAGGGAGAGGTCTGGATTCCCAAGCATTTCTCGCTGTCTCAGGA CAAGAACGGCAGCTGGGAATGCTCGCCGCTGGAGAAATCTGTGCCTCCAGCTCCGATCAT TGTCCCCTCATGACTGTAGATTACATGTAACAGATGATCCTATATATACTATATAAATCT ATAACATAGCTGATGATTTGATTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)