|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4914#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2408 fasta sequence
[GCATGCATACAATACATTTCCCAAGATGGGTGACACCTGGATACCAGAAGATGTGTTCGCTATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAGCTTAATCACCGAATTCTTGCAACAACTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCTGCAAGGAAAGTGGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATGGCTGCCCTTCAGGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTGGGCTCAGCTCATCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCACACTTTAAGAAGACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACCTGACACCGTGTCATGAAATTTTCCTTCAGGCACAGTAGACTGTTTGATATTTTTCCCGTCTTCTTATAGCTGACATGCGGTCGCCTCCTTTGCACTACATTATCACCGTACTCATTTGGCCCAAAAGCATTCAATTCTTGAATAAGGGGCCCTCATAATTTTCTAGTGCCAAATATTACGTACCTTTTCCAAGACTTCTTTGGACATGCTGCATTTTGTCAGGCAATATTGCATTTTTGACATGCTGTCCGCAGCTGTGCACTCTGATTAGATAATATCTAGGGAAACTATTGTATCATGTACCAAATTAATACCAAGTCTCCAAACATTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTCCGCGTCGCCTTCTTCTTCTTCTTCCTCCGCAAGCTTGCTAGCCTCCTCCTCCTCCGCGCCATGATGGGGAGCAGGGTGGCGGCGGCGCTGCTCCGCCGGGGGAGGGACCAGGCGTCCTCGCTCATGGCCGCTCGCCTCCCGAGGGGAGCCCCCGCTCCGTCTCCGGCTGCTCCTAGGGTTGGATCCGGCTCCGTCTGCGGCTGCGGCGGCGGCGGCGGTTTACTAACTGGATCGAGGTCGACGGGATCCGTCTTCTCCGCATCGCGCCTCGCCTCGTTCCACGCCTTCCGTTCAATCGGCTCCAAGACCTTGATGGGCCAATGCACAAGGAAAATGACTACTACTGTGGCAGCAATGAATTCAGGCGTGGCCAATGCAGCGGCATATTCAGGATTGAAGTTGCTTGTTACCAAAGGGCCCCAAGCACAGAAGGCCATCGGGATATGGCTCTTCGGATGTGCCACGTGGGTATTCGGCTTGGTCATACTTGGAGGAGTTACACGGCTTACACGCTCAGGATTGTCGATGACTGACTGGAAATTTACGGGGAGCTTGCCTCCAATGTCAGATGAAGAGTGGCTGCTGGAATTTGAGAAATACAAACTGTCACCTGAGTACAAGAGGGTGAACAAAGGCATGAGCCTTGGAGATTTCAAATTTATATACAGGATGGAGTATGGACACAGAATGTGGGGAAGGGCTCTGGGATTTCTATTTTCTGTTCCTTTTGCCTATTTCATTGCAAAAGGGTATGTTACCCGCCAACTTGGACTCAGGCTGTCAGGTCTTTTCGCACTTGGTGCGGGTCAAGGACTAATTGGCTGGTGGATGGTGAAAAGTGGTCTTGAGGAACCAGCATCTGAGTATGTTCAACCAAGAGTCAGCCCATACAGACTGGCGACCCATTTAACGTCTGCATTTGTTATATATTGTGGCATATTGTGGACAGCTCTGTCAGTGGTTATGCCAGAACCTCCGGCTGGATCAATGAATTGGGTAAATTCTGCAGCAAAGATTAAAAAGTTAGCAATTCCTGTCAGTGCCGTGGTAGGCATTACTGCCATATCTGGAGCATTTGTTGCGGGCACACTGGCGCGGGGTGACGGCGACAGACGGCGCGCGAGCGGGGCTCGAGGCGACGGCGACGACGGACGACGGCGCGCGGCGCAGGCGGGGCTCGAGGGGAGATGGCGACGGCGCGCGGCGCGAGTGATGGCGATGGCGACCGCCCCTCCTCGAGTTCCTTCGCGGGATCGACGAGCCGCCGAGCAAGCTCGAGCTCCTGCACGCGGGATATACGAGCCACCGCTGCGTCCTCCCCGCGCTCCGCCACCGCCCGCACACCGCCGCCACCACGTCCTCCCCCACCGCCGCCGACCCGTTTGAGAGAGAGAGGAAGAGTGAGAGAGAGAAGAGAGAATGAGGAGATGACAGGTGGGTCCCACATTTTTTTTTTATAATAGAGTGGTGACTGGACTGCCACGCGTACGCTACGTAGACCAAAACCACCGTAGATTGGGTCGAGGAGGGTAATTCATCCGGTTTGCATAGTTGGGGGTAAAGGATGTTCGGTTTTATGGTTTAGAGGGGTAATTCGGACGACCATAATAGTTCGAGGGGTAATTCGTCTTTTT]
[+] EMBL AK120031 [GCATGCATACAATACATTTCCCAAGATGGGTGACACCTGGATACCAGAAGATGTGTTCGCTATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAGCTTAATCACCGAATTCTTGCAACAACTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCTGCAAGGAAAGTGGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATGGCTGCCCTTCAGGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTGGGCTCAGCTCATCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCACACTTTAAGAAGACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACCTGACACCGTGTCATGAAATTTTCCTTCAGGCACAGTAGACTGTTTGATATTTTTCCCGTCTTCTTATAGCTGACATGCGGTCGCCTCCTTTGCACTACATTATCACCGTACTCATTTGGCCCAAAAGCATTCAATTCTTGAATAAGGGGCCCTCATAATTTTCTAGTGCCAAATATTACGTACCTTTTCCAAGACTTCTTTGGACATGCTGCATTTTGTCAGGCAATATTGCATTTTTGACATGCTGTCCGCAGCTGTGCACTCTGATTAGATAATATCTAGGGAAACTATTGTATCATGTACCAAATTAATACCAAGTCTCCAAACATTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTCCGCGTCGCCTTCTTCTTCTTCTTCCTCCGCAAGCTTGCTAGCCTCCTCCTCCTCCGCGCCATGATGGGGAGCAGGGTGGCGGCGGCGCTGCTCCGCCGGGGGAGGGACCAGGCGTCCTCGCTCATGGCCGCTCGCCTCCCGAGGGGAGCCCCCGCTCCGTCTCCGGCTGCTCCTAGGGTTGGATCCGGCTCCGTCTGCGGCTGCGGCGGCGGCGGCGGTTTACTAACTGGATCGAGGTCGACGGGATCCGTCTTCTCCGCATCGCGCCTCGCCTCGTTCCACGCCTTCCGTTCAATCGGCTCCAAGACCTTGATGGGCCAATGCACAAGGAAAATGACTACTACTGTGGCAGCAATGAATTCAGGCGTGGCCAATGCAGCGGCATATTCAGGATTGAAGTTGCTTGTTACCAAAGGGCCCCAAGCACAGAAGGCCATCGGGATATGGCTCTTCGGATGTGCCACGTGGGTATTCGGCTTGGTCATACTTGGAGGAGTTACACGGCTTACACGCTCAGGATTGTCGATGACTGACTGGAAATTTACGGGGAGCTTGCCTCCAATGTCAGATGAAGAGTGGCTGCTGGAATTTGAGAAATACAAACTGTCACCTGAGTACAAGAGGGTGAACAAAGGCATGAGCCTTGGAGATTTCAAATTTATATACAGGATGGAGTATGGACACAGAATGTGGGGAAGGGCTCTGGGATTTCTATTTTCTGTTCCTTTTGCCTATTTCATTGCAAAAGGGTATGTTACCCGCCAACTTGGACTCAGGCTGTCAGGTCTTTTCGCACTTGGTGCGGGTCAAGGACTAATTGGCTGGTGGATGGTGAAAAGTGGTCTTGAGGAACCAGCATCTGAGTATGTTCAACCAAGAGTCAGCCCATACAGACTGGCGACCCATTTAACGTCTGCATTTGTTATATATTGTGGCATATTGTGGACAGCTCTGTCAGTGGTTATGCCAGAACCTCCGGCTGGATCAATGAATTGGGTAAATTCTGCAGCAAAGATTAAAAAGTTAGCAATTCCTGTCAGTGCCGTGGTAGGCATTACTGCCATATCTGGAGCATTTGTTGCGGGCACACTGGCGCGGGGTGACGGCGACAGACGGCGCGCGAGCGGGGCTCGAGGCGACGGCGACGACGGACGACGGCGCGCGGCGCAGGCGGGGCTCGAGGGGAGATGGCGACGGCGCGCGGCGCGAGTGATGGCGATGGCGACCGCCCCTCCTCGAGTTCCTTCGCGGGATCGACGAGCCGCCGAGCAAGCTCGAGCTCCTGCACGCGGGATATACGAGCCACCGCTGCGTCCTCCCCGCGCTCCGCCACCGCCCGCACACCGCCGCCACCACGTCCTCCCCCACCGCCGCCGACCCGTTTGAGAGAGAGAGGAAGAGTGAGAGAGAGAAGAGAGAATGAGGAGATGACAGGTGGGTCCCACATTTTTTTTTTATAATAGAGTGGTGACTGGACTGCCACGCGTACGCTACGTAGACCAAAACCACCGTAGATTGGGTCGAGGAGGGTAATTCATCCGGTTTGCATAGTTGGGGGTAAAGGATGTTCGGTTTTATGGTTTAGAGGGGTAATTCGGACGACCATAATAGTTCGAGGGGTAATTCGTCTTTTT]
consensusID : consensus_4914#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1857 fasta sequence
[GTTCCCCCAAAAATTCTAAACCTCCGCGTCGCCTTCTTCTTCTTCTTCCTCCGCAAGCTTGCTAGCCTCCTCCTCCTCCGCGCCATGATGGGGAGCAGGGTGGCGGCGGCGCTGCTCCGCCGGGGGAGGGACCAGGCGTCCTCGCTCATGGCCGCTCGCCTCCCGAGGGGAGCCCCCGCTCCGTCTCCGGCTGCTCCTAGGGTTGGATCCGGCTCCGTCTGCGGCTGCGGCGGCGGCGGCGGTTTACTAACTGGATCGAGGTCGACGGGATCCGTCTTCTCCGCATCGCGCCTCGCCTCGTTCCACGCCTTCCGTTCAATCGGCTCCAAGACCTTGATGGGCCAATGCACAAGGAAAATGACTACTACTGTGGCAGCAATGAATTCAGGCGTGGCCAATGCAGCGGCATATTCAGGATTGAAGTTGCTTGTTACCAAAGGGCCCCAAGCACAGAAGGCCATCGGGATATGGCTCTTCGGATGTGCCACGTGGGTATTCGGCTTGGTCATACTTGGAGGAGTTACACGGCTTACACGCTCAGGATTGTCGATGACTGACTGGAAATTTACGGGGAGCTTGCCTCCAATGTCAGATGAAGAGTGGCTGCTGGAATTTGAGAAATACAAACTGTCACCTGAGTACAAGAGGGTGAACAAAGGCATGAGCCTTGGAGATTTCAAATTTATATACTGGATGGAGTATGGACACAGAATGTGGGGAAGGGCTCTGGGATTTCTATTTTCTGTTCCTTTTGCCTATTTCATTGCAAAAGGGTATGTTACCCGCCAACTTGGACTCAGGCTGTCAGGTCTTTTCGCACTTGGTGCGGGTCAAGGACTAATTGGCTGGTGGATGGTGAAAAGTGGTCTTGAGGAACCAGCATCTGAGTATGTTCAACCAAGAGTCAGCCCATACAGACTGGCGACCCATTTAACGTCTGCATTTGTTATATATTGTGGCATATTGTGGACAGCTCTGTCAGTGGTTATGCCAGAACCTCCGGCTGGATCAATGAATTGGGTAAATTCTGCAGCAAAGATTAAAAAGTTAGCAATTCCTGTCAGTGCCGTGGTAGGCATTACTGCCATATCTGGAGCATTTGTTGCGGGCAATGATGCAGGGCATGCATACAATACATTTCCCAAGATGGGTGACACCTGGATACCAGAAGATGTGTTCGCTATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAGCTTAATCACCGAATTCTTGCAACAACTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCTGCAAGGAAAGTGGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATGGCTGCCCTTCAGGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTGGGCTCAGCTCATCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCACACTTTAAGAAGACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACCTGACACC-GTGTCATGAAATTTTCCTTCAGGCACAGTAGACTGTTTGATATTTTTCCCGTCTTCTTATAGCTGACATGCGGTCGCCTCCTTTGCACTACATTATCACCGTACTCATTTGGCCCAAAAGCATTCAATTCTTGAATAAGGGGCCCTCATAATTTTCTAGTGCCAAATATTACGTACCTTTTCCAAGACTTCTTTGGACATGCTGCATTTTGTCAGGCAATATTGCATTTTTGACATGCTGTCCGCAGCTGTGCACTCTGATTAGATAATATCTAGGGAAACTATTGTATCATGTACCAAATTAATACCAAGTCTCCAAAC]
[+] EMBL AK103187 [GTTCCCCCAAAAATTCTAAACCTCCGCGTCGCCTTCTTCTTCTTCTTCCTCCGCAAGCTTGCTAGCCTCCTCCTCCTCCGCGCCATGATGGGGAGCAGGGTGGCGGCGGCGCTGCTCCGCCGGGGGAGGGACCAGGCGTCCTCGCTCATGGCCGCTCGCCTCCCGAGGGGAGCCCCCGCTCCGTCTCCGGCTGCTCCTAGGGTTGGATCCGGCTCCGTCTGCGGCTGCGGCGGCGGCGGCGGTTTACTAACTGGATCGAGGTCGACGGGATCCGTCTTCTCCGCATCGCGCCTCGCCTCGTTCCACGCCTTCCGTTCAATCGGCTCCAAGACCTTGATGGGCCAATGCACAAGGAAAATGACTACTACTGTGGCAGCAATGAATTCAGGCGTGGCCAATGCAGCGGCATATTCAGGATTGAAGTTGCTTGTTACCAAAGGGCCCCAAGCACAGAAGGCCATCGGGATATGGCTCTTCGGATGTGCCACGTGGGTATTCGGCTTGGTCATACTTGGAGGAGTTACACGGCTTACACGCTCAGGATTGTCGATGACTGACTGGAAATTTACGGGGAGCTTGCCTCCAATGTCAGATGAAGAGTGGCTGCTGGAATTTGAGAAATACAAACTGTCACCTGAGTACAAGAGGGTGAACAAAGGCATGAGCCTTGGAGATTTCAAATTTATATACTGGATGGAGTATGGACACAGAATGTGGGGAAGGGCTCTGGGATTTCTATTTTCTGTTCCTTTTGCCTATTTCATTGCAAAAGGGTATGTTACCCGCCAACTTGGACTCAGGCTGTCAGGTCTTTTCGCACTTGGTGCGGGTCAAGGACTAATTGGCTGGTGGATGGTGAAAAGTGGTCTTGAGGAACCAGCATCTGAGTATGTTCAACCAAGAGTCAGCCCATACAGACTGGCGACCCATTTAACGTCTGCATTTGTTATATATTGTGGCATATTGTGGACAGCTCTGTCAGTGGTTATGCCAGAACCTCCGGCTGGATCAATGAATTGGGTAAATTCTGCAGCAAAGATTAAAAAGTTAGCAATTCCTGTCAGTGCCGTGGTAGGCATTACTGCCATATCTGGAGCATTTGTTGCGGGCAATGATGCAGGGCATGCATACAATACATTTCCCAAGATGGGTGACACCTGGATACCAGAAGATGTGTTCGCTATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAGCTTAATCACCGAATTCTTGCAACAACTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCTGCAAGGAAAGTGGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATGGCTGCCCTTCAGGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTGGGCTCAGCTCATCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCACACTTTAAGAAGACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACCTGACACC GTGTCATGAAATTTTCCTTCAGGCACAGTAGACTGTTTGATATTTTTCCCGTCTTCTTATAGCTGACATGCGGTCGCCTCCTTTGCACTACATTATCACCGTACTCATTTGGCCCAAAAGCATTCAATTCTTGAATAAGGGGCCCTCATAATTTTCTAGTGCCAAATATTACGTACCTTTTCCAAGACTTCTTTGGACATGCTGCATTTTGTCAGGCAATATTGCATTTTTGACATGCTGTCCGCAGCTGTGCACTCTGATTAGATAATATCTAGGGAAACTATTGTATCATGTACCAAATTAATACCAAGTCTCCAAAC]
[-] EMBL CA305642 [ TCCCAAGATGGGTGACACCTGGATACCAGAAGATGTGTTCGCTATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAGCTTAATCACCGAATTCTTGCAACAATTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCTGCAAGGAAAGTGGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATGGCTGCCCTTCAGGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTGGGCTCAGCTCATCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCACACTTTAAGAAGACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACCTGACACCNGTGTCATGAAATTTTCCTTCAGGCACAGTAGACTGTTTGATATNTTTCCCGTCTTCTTATAGCTGACATGCGGTCGCCTCCTTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4914#0 GCATGCATACAATACATTTCCCAAGATGGGTGACACCTGGATACCAGAAGATGTGTTCGC 60
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 TATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAGCTTAATCACCG 120
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 AATTCTTGCAACAACTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCTGCAAGGAAAGT 180
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 GGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATGGCTGCCCTTCA 240
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 GGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTGGGCTCAGCTCA 300
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 TCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCACACTTTAAGAAG 360
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 ACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACCTGACACCGTGT 420
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 CATGAAATTTTCCTTCAGGCACAGTAGACTGTTTGATATTTTTCCCGTCTTCTTATAGCT 480
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 GACATGCGGTCGCCTCCTTTGCACTACATTATCACCGTACTCATTTGGCCCAAAAGCATT 540
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 CAATTCTTGAATAAGGGGCCCTCATAATTTTCTAGTGCCAAATATTACGTACCTTTTCCA 600
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 AGACTTCTTTGGACATGCTGCATTTTGTCAGGCAATATTGCATTTTTGACATGCTGTCCG 660
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 CAGCTGTGCACTCTGATTAGATAATATCTAGGGAAACTATTGTATCATGTACCAAATTAA 720
consensus_4914#1 ------------------------------------------------------------
consensus_4914#0 TACCAAGTCTCCAAACATTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTCCGCGTC 780
consensus_4914#1 ------------------------------GTTCCCCCAAAAATTCTAAACCTCCGCGTC 30
***** *************
consensus_4914#0 GCCTTCTTCTTCTTCTTCCTCCGCAAGCTTGCTAGCCTCCTCCTCCTCCGCGCCATGATG 840
consensus_4914#1 GCCTTCTTCTTCTTCTTCCTCCGCAAGCTTGCTAGCCTCCTCCTCCTCCGCGCCATGATG 90
************************************************************
consensus_4914#0 GGGAGCAGGGTGGCGGCGGCGCTGCTCCGCCGGGGGAGGGACCAGGCGTCCTCGCTCATG 900
consensus_4914#1 GGGAGCAGGGTGGCGGCGGCGCTGCTCCGCCGGGGGAGGGACCAGGCGTCCTCGCTCATG 150
************************************************************
consensus_4914#0 GCCGCTCGCCTCCCGAGGGGAGCCCCCGCTCCGTCTCCGGCTGCTCCTAGGGTTGGATCC 960
consensus_4914#1 GCCGCTCGCCTCCCGAGGGGAGCCCCCGCTCCGTCTCCGGCTGCTCCTAGGGTTGGATCC 210
************************************************************
consensus_4914#0 GGCTCCGTCTGCGGCTGCGGCGGCGGCGGCGGTTTACTAACTGGATCGAGGTCGACGGGA 1020
consensus_4914#1 GGCTCCGTCTGCGGCTGCGGCGGCGGCGGCGGTTTACTAACTGGATCGAGGTCGACGGGA 270
************************************************************
consensus_4914#0 TCCGTCTTCTCCGCATCGCGCCTCGCCTCGTTCCACGCCTTCCGTTCAATCGGCTCCAAG 1080
consensus_4914#1 TCCGTCTTCTCCGCATCGCGCCTCGCCTCGTTCCACGCCTTCCGTTCAATCGGCTCCAAG 330
************************************************************
consensus_4914#0 ACCTTGATGGGCCAATGCACAAGGAAAATGACTACTACTGTGGCAGCAATGAATTCAGGC 1140
consensus_4914#1 ACCTTGATGGGCCAATGCACAAGGAAAATGACTACTACTGTGGCAGCAATGAATTCAGGC 390
************************************************************
consensus_4914#0 GTGGCCAATGCAGCGGCATATTCAGGATTGAAGTTGCTTGTTACCAAAGGGCCCCAAGCA 1200
consensus_4914#1 GTGGCCAATGCAGCGGCATATTCAGGATTGAAGTTGCTTGTTACCAAAGGGCCCCAAGCA 450
************************************************************
consensus_4914#0 CAGAAGGCCATCGGGATATGGCTCTTCGGATGTGCCACGTGGGTATTCGGCTTGGTCATA 1260
consensus_4914#1 CAGAAGGCCATCGGGATATGGCTCTTCGGATGTGCCACGTGGGTATTCGGCTTGGTCATA 510
************************************************************
consensus_4914#0 CTTGGAGGAGTTACACGGCTTACACGCTCAGGATTGTCGATGACTGACTGGAAATTTACG 1320
consensus_4914#1 CTTGGAGGAGTTACACGGCTTACACGCTCAGGATTGTCGATGACTGACTGGAAATTTACG 570
************************************************************
consensus_4914#0 GGGAGCTTGCCTCCAATGTCAGATGAAGAGTGGCTGCTGGAATTTGAGAAATACAAACTG 1380
consensus_4914#1 GGGAGCTTGCCTCCAATGTCAGATGAAGAGTGGCTGCTGGAATTTGAGAAATACAAACTG 630
************************************************************
consensus_4914#0 TCACCTGAGTACAAGAGGGTGAACAAAGGCATGAGCCTTGGAGATTTCAAATTTATATAC 1440
consensus_4914#1 TCACCTGAGTACAAGAGGGTGAACAAAGGCATGAGCCTTGGAGATTTCAAATTTATATAC 690
************************************************************
consensus_4914#0 AGGATGGAGTATGGACACAGAATGTGGGGAAGGGCTCTGGGATTTCTATTTTCTGTTCCT 1500
consensus_4914#1 TGGATGGAGTATGGACACAGAATGTGGGGAAGGGCTCTGGGATTTCTATTTTCTGTTCCT 750
***********************************************************
consensus_4914#0 TTTGCCTATTTCATTGCAAAAGGGTATGTTACCCGCCAACTTGGACTCAGGCTGTCAGGT 1560
consensus_4914#1 TTTGCCTATTTCATTGCAAAAGGGTATGTTACCCGCCAACTTGGACTCAGGCTGTCAGGT 810
************************************************************
consensus_4914#0 CTTTTCGCACTTGGTGCGGGTCAAGGACTAATTGGCTGGTGGATGGTGAAAAGTGGTCTT 1620
consensus_4914#1 CTTTTCGCACTTGGTGCGGGTCAAGGACTAATTGGCTGGTGGATGGTGAAAAGTGGTCTT 870
************************************************************
consensus_4914#0 GAGGAACCAGCATCTGAGTATGTTCAACCAAGAGTCAGCCCATACAGACTGGCGACCCAT 1680
consensus_4914#1 GAGGAACCAGCATCTGAGTATGTTCAACCAAGAGTCAGCCCATACAGACTGGCGACCCAT 930
************************************************************
consensus_4914#0 TTAACGTCTGCATTTGTTATATATTGTGGCATATTGTGGACAGCTCTGTCAGTGGTTATG 1740
consensus_4914#1 TTAACGTCTGCATTTGTTATATATTGTGGCATATTGTGGACAGCTCTGTCAGTGGTTATG 990
************************************************************
consensus_4914#0 CCAGAACCTCCGGCTGGATCAATGAATTGGGTAAATTCTGCAGCAAAGATTAAAAAGTTA 1800
consensus_4914#1 CCAGAACCTCCGGCTGGATCAATGAATTGGGTAAATTCTGCAGCAAAGATTAAAAAGTTA 1050
************************************************************
consensus_4914#0 GCAATTCCTGTCAGTGCCGTGGTAGGCATTACTGCCATATCTGGAGCATTTGTTGCGGGC 1860
consensus_4914#1 GCAATTCCTGTCAGTGCCGTGGTAGGCATTACTGCCATATCTGGAGCATTTGTTGCGGGC 1110
************************************************************
consensus_4914#0 A-----------CACTGGCGCG----------------GGGTGAC-----GGCGACAGAC 1888
consensus_4914#1 AATGATGCAGGGCATGCATACAATACATTTCCCAAGATGGGTGACACCTGGATACCAGAA 1170
* ** * ******* * ****
consensus_4914#0 GGCGCGCGAGC---GGGGCTCG----AGGCGACGGCGACGACGG-ACGACGGC-GCGCGG 1939
consensus_4914#1 GATGTGTTCGCTATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAG 1230
* * * ** ** ** * * ** * ** *** * * * ** *
consensus_4914#0 CGCAGGCG--GGGCTCGAGGGGAGATGGC------GACGGCGCGCGGC--GCGAGTGATG 1989
consensus_4914#1 CTTAATCACCGAATTCTTGCAACAACTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCT 1290
* * * * ** * * * * * * * * *** * **
consensus_4914#0 GCGATG---GCGACCGCCCCTCC-----TCGAGTTCCTTCGCGGGATC-------GACGA 2034
consensus_4914#1 GCAAGGAAAGTGGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATG 1350
** * * * * * * *** ** *** *** *** * * **
consensus_4914#0 GCCGCCGAGCAAGCTC------GAGCTCCTGCACGCGGGATATACGAGCC-ACCGCTGCG 2087
consensus_4914#1 GCTGCCCTTCAGGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTG 1410
** *** ** * * ** ** *** *** ** * ** ** * *
consensus_4914#0 TCCTCCCCGCGCTCCGCCACCGCCCGCACACCGCCGCCACCA-----CGTCCTCCCCCAC 2142
consensus_4914#1 GGCTCAGCTCATCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCAC 1470
*** * * ** ** **** * * *** * * *** *****
consensus_4914#0 -------------CGCCGCCGACCCGTTTGAGAGAG---AGAGGAAGAGTGAGAGAGAGA 2186
consensus_4914#1 ACTTTAAGAAGACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACC 1530
** * ** *** * *** * * ***** * *
consensus_4914#0 AGAGAGAATG--AGGAGATGA-----CAGGTGGGTCCCACATTTTT---TTTTTATAATA 2236
consensus_4914#1 TGACACCGTGTCATGAAATTTTCCTTCAGGCACAGTAGACTGTTTGATATTTTTCCCGTC 1590
** * ** * ** ** **** ** *** ***** *
consensus_4914#0 GAGTGGTGACTGGACTGCCACGCGTACGCTACGTAGACCAAAACCACCGTAG--ATTGGG 2294
consensus_4914#1 TTCTTATAGCTGACATGCGGT-CGCCTCCTTTGCACTACATTATCACCGTACTCATTTGG 1649
* * *** *** ** ** * * ** * ******* *** **
consensus_4914#0 TCGAGGAGGGT--AATTCATCCGGTTTGCATAGTTGGGGGTAAAGGATGTTCGGTTTTAT 2352
consensus_4914#1 CCCAAAAGCATTCAATTCTTGAATAAGGGGCCCTCATAATTTTCTAGTGCCAAATATTAC 1709
* * ** * ***** * * * * ** * ***
consensus_4914#0 GG----TTTAGAGGGGTAATTCGGACG-ACCATAATAGTTCGAGGGGTAATTCGTCTTTT 2407
consensus_4914#1 GTACCTTTTCCAAGACTTCTTTGGACATGCTGCATTTTGTCAGGCAATATTGCATTTTTG 1769
* *** * * * ** **** * * * ** * ** * * * ***
consensus_4914#0 T----------------------------------------------------------- 2408
consensus_4914#1 ACATGCTGTCCGCAGCTGTGCACTCTGATTAGATAATATCTAGGGAAACTATTGTATCAT 1829
consensus_4914#0 ----------------------------
consensus_4914#1 GTACCAAATTAATACCAAGTCTCCAAAC 1857
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||