cluster # 4919

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Oryza sativa
cluster # 4919 cluster # 4919 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4919#0 length = 728 sequences # 3

consensusID : consensus_4919#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 728
fasta sequence

                              [TTTTTTT--TCGAACAAAACAATTTCAATCACTCAACACCTTGTTCCTTAAAAAGGTACAATCCTATGGCAGAAAATGCTACAAACAAAACAACTATTCTTTTCTGCAAAGTTTCTACACTAGTGTAAATTGTGCAATTGGGGCATTGGGCAATGCTAGTGTACAAGTGTCGCCTCAACCATTTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTATCCACTGAAATCAACCAAAGAAGAGTAAGATTTGTTCTCGTCAGTTGAAGCAGCATTTCTCTCTTCGGTTTTCCTCCTTGTT-TGTTCATTCCCAGGCTTCTGTGAAGTGGCGGCGCCGAAGCCGGCCATCTCATTCAGTTCTGACCTCT-TGCGCCTAGCTTCCTCCACATCCCCTTCCCAGCATGTCTCCGCGATGACTTCCTGGGCTTTTTCCATATTTTCCGCGGCGATCAAACTATCATTTTGCAGCAGTACGAGGTACACCTGATCAGCTGCGGCCTTCCGGATCTTGGGGTATCTGTGGCCTAGGAATGTGAGGAGTTGAGAGAAGGCCGTGCTG-CATTTCCATCCGACTGGGAAGAAATGTAACCCAAGTATTGAGAGACCCTGCGCTTAACTTTGCAAAGTCCTTTGATCCCTTCAGCTCCCGGCCCAGCGATTTTATCAGTCCACTGTAGAACTCACAATGCCCCTCACGCAAAAAAACC]

[-] EMBL BI812374             [TTTTTTTCATCGAACAAAACAATTTCAATCACTCAACACC TGTTCCTTAAAAAGGTACAATCCTATGGCAGAAAATGCTACAAACAAAACAACTATTCTTTTCTGCAAAGTTTCTACACTAGTGTAAA TGTGCAA TGGGGCA TGGGCAATGCTAGTGTACAAGTGTCGCCTCAACCATTTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTATCCACTGAAATCAACCAAAGAAGAGTAAGATTGGTTCTCGTCAGTTGAAGCAGCATTTCTCTCTTCGGTTTTCCTCCTTGTTGTGTTCATTCCCAGGCTTCTGTGAAGTGGCGG GCCGAAGCCGG CATCTCATTCAGTTCTGACCTCTGTGCGCCTAGCTTCCTCCA AT CCCTTCCCAGa                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL BQ908871             [   TTTT  TCGAACAAAACAATTTCAATCACTCAACACCTTGTTCCTTAAAAAGGTACAATCCTATGGCAGAAAATGCTACAAACAAAACAACTATTCTTTTCTGCAAAGTTTCTACACTAGTGTAAATTGTGCAATTGGGGCATTGGGCAATGCTAGTGTACAAGTGTCGCCTCAACCATTTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTATCCACTGAAATCAACCAAAGAAGAGTAAGATTTGTTCTCGTCAGTTGAAGCAGCATTTCTCTCTTCGGTTTTCCTCCTTGTT TGTTCATTCCCAGGCTTCTGTGAAGTGGCGGCGCCGAAGCCGGCCATCTCATTCAGTTCTGACCTCT TGCGCCTAGCTTCCTCCACATCCCCTTCCCAGCATGTCTCCGCGATGACTTCCTGGGCTTTTTCCATATTTTCCGCGGCGATCAAACTATCATTTTGCAGCAGTACGAGGTACACCTGATCAGCTGCGGCCTTCCGGATCTTGGGGTATCTGTGGCCTAGGAATGTGAGGAGTTGAGAGAAGGCCGTGCTG CATTTCCATCCGACTGGGAAGAAATGTAACCCAAGTATTGAGAGACCCTGCGCTTAACTTTGCAAAGTCCTTTGATCCCTTCAGCTCCCGG                                                         ]
[+] EMBL CB627889             [                                  AACACCTTGTCCCTTAAAAAGGTACAATCCTATGGCAAAAAATGCTACAAACAAAACGACTATTCTTTTCTGCAAAGTTTCTACACTAGTGTAAATTGTGCAATTGGGGCATTGGGCAATGCTAGTGTACAAGTGTCCCCTCAACCATTTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTATCCACTGAAATCAACCAAAAAAAAGTAAGATTTGTTCTCGTCAGTTGAAGCAGCATTTCTCTCTTCGGTTTTCCTCCTTGTT TGTTCATTCCCAGGCTTCTGTGAAGTGGCGGCGCCAAAGCCGGCCATCTCATTCAGTTCTGACCTCT TGCGCCTAGCTTCCTCCACATCCCCTTCCCAGCATGTCTCCGCGATGACTTCCTGGGCTTTTTCCATATTTTCCGCGGCGATCAAACTATCATTTTGCAGCAGTACGAGGTACACCTGATCAGCTGCGGCTTTCCGGATCTTGGGGTATCTGTGGCCTAGGAATGTGAGGAGTTGAAAGAAGGCCGTGCTGCCATTTCCATCCGACTGGGAAGAAATGT ACCCAAGTATTGAGAGA CCTGCGCTTAACTTTGCAAAGTCCTTTGATCCCTTCAGCTCCGGGCCCAGCGATTTTATCAGTCCACTGTAGAACTCACAATGCCCCTCACGCAAAAAAACC]




>consensus_4919#0
TTTTTTTTCGAACAAAACAATTTCAATCACTCAACACCTTGTTCCTTAAAAAGGTACAAT
CCTATGGCAGAAAATGCTACAAACAAAACAACTATTCTTTTCTGCAAAGTTTCTACACTA
GTGTAAATTGTGCAATTGGGGCATTGGGCAATGCTAGTGTACAAGTGTCGCCTCAACCAT
TTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTA
TCCACTGAAATCAACCAAAGAAGAGTAAGATTTGTTCTCGTCAGTTGAAGCAGCATTTCT
CTCTTCGGTTTTCCTCCTTGTTTGTTCATTCCCAGGCTTCTGTGAAGTGGCGGCGCCGAA
GCCGGCCATCTCATTCAGTTCTGACCTCTTGCGCCTAGCTTCCTCCACATCCCCTTCCCA
GCATGTCTCCGCGATGACTTCCTGGGCTTTTTCCATATTTTCCGCGGCGATCAAACTATC
ATTTTGCAGCAGTACGAGGTACACCTGATCAGCTGCGGCCTTCCGGATCTTGGGGTATCT
GTGGCCTAGGAATGTGAGGAGTTGAGAGAAGGCCGTGCTGCATTTCCATCCGACTGGGAA
GAAATGTAACCCAAGTATTGAGAGACCCTGCGCTTAACTTTGCAAAGTCCTTTGATCCCT
TCAGCTCCCGGCCCAGCGATTTTATCAGTCCACTGTAGAACTCACAATGCCCCTCACGCA
AAAAAACC

clustalw multiple alignements is not computed in this case