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Oryza sativa
cluster # 4924 cluster # 4924       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4924#0 length = 1045 sequences # 3  

consensusID : consensus_4924#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1045
fasta sequence
                              [TCCAGAGCCTCACCTCGCCATCGTCGCCATGGAGCACCTCCTGCTCCCTCTCCTCCCCCACCGCCCCTCCCAACCCCTCCTCCTCCTCCTCCGCCATCGCCGCCGCCCATCCATCCCCCGGGCATCATCCGGCGACCCCTCCCCCACCGCGGCCGATGCTCCGACGGACGCTCAGTCCGCCACGCCTCCCTCCTCCGGCGCCAAGCCCACCGGCGTCAAGAACCGCCTCCGCGCGAGGAACCAAGCTCGCCGCGTCCAGGAGTTCACTCCGCCGGCGCCGTTGGGGATCACCATGAAATCCAAGTCGTCGTCGTCGTCGAGGCCGGCTGCGTCGAAGTCGTCGGCGTCGGCTTCGGCTTCGGCGGCGACGCGCAGGGAGAAGCAGACGAGGAGGAAGGAGTGGGAGGAGATGAGCATGGCGGAGAAGGCCGGCGAGCTGTACGTCGGGGAGAAGGGGCTCCTCTTCTGGCTCAACAAGTTCGCCTACGCCTCCATCTTCATCATGGTCGGCGCCTGGATCCTCTTCCGCTTCGTCGGCCCCTCCATTGGCCTCTACCAGCTCGACGCGCCGCCGCTCGCGCCCACCGATGTCTTCGCCGGCTCGCCGTGAGCGCGTCGCCGGGGGCGTGTTCTTGATTACCATCGAGATCGAGTACTCTACTAGATTCTAGGTACCTAGTGTATAGCAGATGATTAAGGAAAATGTGGATCATTTGGTCGAGGAAGCAGAGGATGTAAACTAGTGTTGCTGTGTTGGCGAAGATTGGTCGAGGAATCAGAATGTATAAATTGCACTGCACAATTTTGGAGTTAAAATGTTTGAGATAAAAAAATGCGAATTGTGGGTGTGAGTATTCCTGCTATCTTGCTACAATTATTAACCAGGAAATTGTTGTGTTCCTCCCTGGTTATCTTCACTTTTTGCATGTTCTTAGTTACCTAGTGTAGCGTATGATTAAGGAAATGTGGATCATTTGGTCGAGGATGCAGAGGATGTAAACTACTGTTGCTGTGCTGGCGAAGATTGATCGAGGAATCAGAATGT]

[+] EMBL AK066293             [TCCAGAGCCTCACCTCGCCATCGTCGCCATGGAGCACCTCCTGCTCCCTCTCCTCCCCCACCGCCCCTCCCAACCCCTCCTCCTCCTCCTCCGCCATCGCCGCCGCCCATCCATCCCCCGGGCATCATCCGGCGACCCCTCCCCCACCGCGGCCGATGCTCCGACGGACGCTCAGTCCGCCACGCCTCCCTCCTCCGGCGCCAAGCCCACCGGCGTCAAGAACCGCCTCCGCGCGAGGAACCAAGCTCGCCGCGTCCAGGAGTTCACTCCGCCGGCGCCGTTGGGGATCACCATGAAATCCAAGTCGTCGTCGTCGTCGAGGCCGGCTGCGTCGAAGTCGTCGGCGTCGGCTTCGGCTTCGGCGGCGACGCGCAGGGAGAAGCAGACGAGGAGGAAGGAGTGGGAGGAGATGAGCATGGCGGAGAAGGCCGGCGAGCTGTACGTCGGGGAGAAGGGGCTCCTCTTCTGGCTCAACAAGTTCGCCTACGCCTCCATCTTCATCATGGTCGGCGCCTGGATCCTCTTCCGCTTCGTCGGCCCCTCCATTGGCCTCTACCAGCTCGACGCGCCGCCGCTCGCGCCCACCGATGTCTTCGCCGGCTCGCCGTGAGCGCGTCGCCGGGGGCGTGTTCTTGATTACCATCGAGATCGAGTACTCTACTAGATTCTAGGTACCTAGTATATAGCAGATGATTAAGGAAAATGTGGATCATTTGGTCGAGGAAGCAGAGGATGTAAACTAGTGTTGCTGTGTTGGCGAAGATTGGTCGAGGAATCAGAATGTATAAATTGCACTGCACAATTTTGGAGTTAAAATGTTTGAGAT                                                                                                                                                                                                                           ]
[+] EMBL BI812354             [                                                                                                                                                                                                                                                                                                                    CGTCGTCGTCGA GCC GCTGCGTCGAAGTC TCGGC TCGGCTTCGGCTTC GC GCGACGCGCAGGGAGAA CAGACGAGGAGGAAGGAGTGGGAGGAGATGAGCATGGCGGAGAA GCCGGCGAGCTCTACGTCGGGGAGAAGGGGCTCCTCTTCTGGCTCAACAAGTTCGCCTACGCCTCCATCTTCATCATGGTCGGCGCCTGGATCCTCTTCCGCTTCGTCGGCCCCTCC TTGGCCTCTACCAGCTCGACGCGCCGCCGCTCGCGCCCACCGATGTCTTCGCCGGCTC CCGTGAGCGCGTCGCCGGGGGCGTGTTCTTGATTACCATCGAGATCGAGTACTCTACTAGATTCTAGGTACCTAGTGTATAGCAGATGATTAAGGAAAATGTGGATCATTTGGTCGAGGAAGCCGAGGATGTAAACTAGTGTTGCTGTGTTGGCGAAGATTGGTCGAGGAATCAGAATGTATAAATTGC CTGCAC ATTTTGAAGTTAAAATGTTTGAGATAAAAAAA                                                                                                                                                                                                                    ]
[+] EMBL CA754014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGGCTCCTCTTCTGGCTCAACAAGTTCGCCTACGCCTCCATCTTCATCATGGTCGGCGCCTGGATCCTCTTCCGCTTCGTCGGCCCCTCCATTGGCCTCTACCAGCTCGACGCGCCGCCGCTCGCGCCCACCGATGTCTTCGCCGGCTCGCCGTGAGCGCGTCGCCGGGGGCGTGTTCTTGATTACCATCGAGATCGAGTACTCTACTAGATTCTAGGTACCTAGTGTATAGCAGATGATTAAGGAAAATGTGGATCATTTGGTCGAGGAAGCAGAGGATGTAAACTAGTGTTGCTGTGTTGGCGAAGATTGGTCGAGGAATCAGAATGTATAAATTGCACTGCACAATTTTGGAGTTAAAATGTTTGAGATATTTTGCTGCGAATTGTGGGTGTGAGTATTCCTGCTATCTTGCTACAATTATTAACCAGGAAATTGTTGTGTTCCTCCCTGGTTATCTTCACTTTTTGCATGTTCTTAGTTACCTAGTGTAGCGTATGATTAAGGAAATGTGGATCATTTGGTCGAGGATGCAGAGGATGTAAACTACTGTTGCTGTGCTGGCGAAGATTGATCGAGGAATCAGAATGT]


>consensus_4924#0 TCCAGAGCCTCACCTCGCCATCGTCGCCATGGAGCACCTCCTGCTCCCTCTCCTCCCCCA CCGCCCCTCCCAACCCCTCCTCCTCCTCCTCCGCCATCGCCGCCGCCCATCCATCCCCCG GGCATCATCCGGCGACCCCTCCCCCACCGCGGCCGATGCTCCGACGGACGCTCAGTCCGC CACGCCTCCCTCCTCCGGCGCCAAGCCCACCGGCGTCAAGAACCGCCTCCGCGCGAGGAA CCAAGCTCGCCGCGTCCAGGAGTTCACTCCGCCGGCGCCGTTGGGGATCACCATGAAATC CAAGTCGTCGTCGTCGTCGAGGCCGGCTGCGTCGAAGTCGTCGGCGTCGGCTTCGGCTTC GGCGGCGACGCGCAGGGAGAAGCAGACGAGGAGGAAGGAGTGGGAGGAGATGAGCATGGC GGAGAAGGCCGGCGAGCTGTACGTCGGGGAGAAGGGGCTCCTCTTCTGGCTCAACAAGTT CGCCTACGCCTCCATCTTCATCATGGTCGGCGCCTGGATCCTCTTCCGCTTCGTCGGCCC CTCCATTGGCCTCTACCAGCTCGACGCGCCGCCGCTCGCGCCCACCGATGTCTTCGCCGG CTCGCCGTGAGCGCGTCGCCGGGGGCGTGTTCTTGATTACCATCGAGATCGAGTACTCTA CTAGATTCTAGGTACCTAGTGTATAGCAGATGATTAAGGAAAATGTGGATCATTTGGTCG AGGAAGCAGAGGATGTAAACTAGTGTTGCTGTGTTGGCGAAGATTGGTCGAGGAATCAGA ATGTATAAATTGCACTGCACAATTTTGGAGTTAAAATGTTTGAGATAAAAAAATGCGAAT TGTGGGTGTGAGTATTCCTGCTATCTTGCTACAATTATTAACCAGGAAATTGTTGTGTTC CTCCCTGGTTATCTTCACTTTTTGCATGTTCTTAGTTACCTAGTGTAGCGTATGATTAAG GAAATGTGGATCATTTGGTCGAGGATGCAGAGGATGTAAACTACTGTTGCTGTGCTGGCG AAGATTGATCGAGGAATCAGAATGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)