cluster # 4939

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Oryza sativa
cluster # 4939 cluster # 4939 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4939#0 length = 2117 sequences # 3
consensusID : consensus_4939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2117
fasta sequence
                              [TTCCCTCCCCCGGACTCCACTCTACACCCTTCACGCGCGCGAGCACGCACGCAGTTGGTGCATCCTTTCCCTCGTCTCCATCTCCATATCAGCCTTCCCCTTCACCCCAAAGGCACCTGCCACTGGCAGCAGGCGGCTTCAAGAACCAAAGAATCTTGACACACAGAGATAGAGAGAGAGGAAATTAAAGGTAATATTAGTAGTAGTGAGTAGTGACTTGATCTTGACAAAAGTTAGAGGAGCAGCAGGAGGAGCAGGAGGGTGGAGGGACCATATTTCTGGTTCTTGGAGTGTGATCATGAGGTCTCCGAGATCGGGGAGACAGGATCCATAGGTGAGGGCGTGTGAATTGGAGACTGATTAGAGAGCTAGGCGAGCGAGGAGGAAGAAGAGATCAGGTGAAGATGAGCTTCAACAAGAGCAGGGGGGGAGCAGCGGTGCTCGGCGGAGGGGACGAGCTGGTGCTCCGTGGCACCATCTCCAAGAAATGGACCCTCCTCCTCTGCCTCGCCAGCTTCTGCATCGGCCTCATCTTCACCAACAGGATGTGGACAATGCCAGAACCAAAAGAGATCATCAGGAGATCGGCTCTAGAAGTGAACAAGATGAACCTGTTGTCTGGTGACTGTGCTCCGAAAAGTGTTATGGAGCAAAAAGATATAATTGGAGAGGTCCCAAGAACTCAGGATGCTATACAGGCATTGGACAAAACAATATCAAACTTAGAAATGGAGTTAGCATCAGCAAAGGCGTCACAGGAGGAGTCTGAGCTCAATGGAGCGCCGCTATCAGAATCTACGGGGAAACGGAGATACTTCATGGTCATTGGCATCAACACCGCATTCAGCAGCCGGAAACGAAGAGATTCACTTCGTGCTACGTGGATGCCTCAAGGTG-AAAAAAGAAGGAAGCTTGAGGAAGAAAAGGGAATTATCATCCGATTCGTCATTGGTCATAGCGCAACATCTGGTGGCATACTCGATAGAGCTATAGACGCAGAAGATAGGAAACATGGTGACTTCATGAGATTGGATCATGTTGAAGGGTATCTGGAATTGGCTGCAAAGACGAAATCGTTCTTTGTGACAGCCTTGTCCATGTGGGATGCAGAGTACTACATTAAAGTGGATGATGATGTACATGTAAATATAGCAACTCTTGGTAACATATTGGCTAAGCATCGGTCGAAGCCTCGAGCTTACATTGGTTGCATGAAATCTGGTCCAGTCCTGGCTCAGAAGGGTGTAAGATACCATGAGCCCGAGTACTGGAAATTCGGCGAATGGGGGAACAAGTACTTCCGTCATGCAACCGGCCAGTTATATGCAATCTCCAAGGATCTAGCTTCTTATATATCAATCAACCAGCATGTTCTCCACAAATATGCTAATGAGGATGTATCATTAGGAGCATGGTTCATAGGTCTAGACGTCGAACACGTCGATGATCGCAGGCTTTGCTGCGGTACACAACCAGATTGCGAATGGAAGGCGCAGGCAGGCAACGTGTGCGCCGCGTCGTTCGACTGGAGCTGCAGCGGCATCTGCAAATCGGCGGATCGGATGAAGGAGGTCCATCAACGATGTGGGGAGAACGACAGCGCCATCTGGAGTGCAAAGTTCTGAACTGAAGGAACATAATGCCCAACAACAACTTTGCACTCTTGAACACAAGCAGCACATATATATATAGATACAAGATACAACTCGTGATTCAACAGTGTGAGTAACCAATCATCTGAGCAGAGGAATCCCTGAAGATGATGAACGGAAAGAACAGTCGATTGATGGCAGTTTCAGAGATCATGGGATGAGTGTACACTCAAGTGTACAAGCATGGCCGACAGGATGGGTTCTTCTGCTGCTTTTTTTTTCTTGTTTCTTTTTTTTTTCTTTTGGTGGTTTTCAGTAGGTATTGTATTGTTTTAGGGGATCTTTTCTGTTTTGTGGTCGAAAAGATCCCTGGAAATTACCCATAAAGATGGAGAAGGTGAGGAGGGAAAGAGTGAAAGGAGAGGGAGATCGAGAGGGGTCTCCCCCCACCATTCTTGGAAAGATGTTCATCACCGTTTCTGATTAATTTTCTCTGGAATAACATAATAAGAAGCTCATCTTCTC]

[+] EMBL AK121292             [TTCCCTCCCCCGGACTCCACTCTACACCCTTCACGCGCGCGAGCACGCACGCAGTTGGTGCATCCTTTCCCTCGTCTCCATCTCCATATCAGCCTTCCCCTTCACCCCAAAGGCACCTGCCACTGGCAGCAGGCGGCTTCAAGAACCAAAGAATCTTGACACACAGAGATAGAGAGAGAGGAAATTAAAGGTAATATTAGTAGTAGTGAGTAGTGACTTGATCTTGACAAAAGTTAGAGGAGCAGCAGGAGGAGCAGGAGGGTGGAGGGACCATATTTCTGGTTCTTGGAGTGTGATCATGAGGTCTCCGAGATCGGGGAGACAGGATCCATAGGTGAGGGCGTGTGAATTGGAGACTGATTAGAGAGCTAGGCGAGCGAGGAGGAAGAAGAGATCAGGTGAAGATGAGCTTCAACAAGAGCAGGGGGGGAGCAGCGGTGCTCGGCGGAGGGGACGAGCTGGTGCTCCGTGGCACCATCTCCAAGAAATGGACCCTCCTCCTCTGCCTCGCCAGCTTCTGCATCGGCCTCATCTTCACCAACAGGATGTGGACAATGCCAGAACCAAAAGAGATCATCAGGAGATCGGCTCTAGAAGTGAACAAGATGAACCTGTTGTCTGGTGACTGTGCTCCGAAAAGTGTTATGGAGCAAAAAGATATAATTGGAGAGGTCCCAAGAACTCAGGATGCTATACAGGCATTGGACAAAACAATATCAAACTTAGAAATGGAGTTAGCATCAGCAAAGGCGTCACAGGAGGAGTCTGAGCTCAATGGAGCGCCGCTATCAGAATCTACGGGGAAACGGAGATACTTCATGGTCATTGGCATCAACACCGCATTCAGCAGCCGGAAACGAAGAGATTCACTTCGTGCTACGTGGATGCCTCAAGGTGAAAAAAAGAAGGAAGCTTGAGGAAGAAAAGGGAATTATCATCCGATTCGTCATTGGTCATAGCGCAACATCTGGTGGCATACTCGATAGAGCTATAGACGCAGAAGATAGGAAACATGGTGACTTCATGAGATTGGATCATGTTGAAGGGTATCTGGAATTGGCTGCAAAGACGAAATCGTTCTTTGTGACAGCCTTGTCCATGTGGGATGCAGAGTACTACATTAAAGTGGATGATGATGTACATGTAAATATAGCAACTCTTGGTAACATATTGGCTAAGCATCGGTCGAAGCCTCGAGCTTACATTGGTTGCATGAAATCTGGTCCAGTCCTGGCTCAGAAGGGTGTAAGATACCATGAGCCCGAGTACTGGAAATTCGGCGAATGGGGGAACAAGTACTTCCGTCATGCAACCGGCCAGTTATATGCAATCTCCAAGGATCTAGCTTCTTATATATCAATCAACCAGCATGTTCTCCACAAATATGCTAATGAGGATGTATCATTAGGAGCATGGTTCATAGGTCTAGACGTCGAACACGTCGATGATCGCAGGCTTTGCTGCGGTACACAACCAGATTGCGAATGGAAGGCGCAGGCAGGCAACGTGTGCGCCGCGTCGTTCGACTGGAGCTGCAGCGGCATCTGCAAATCGGCGGATCGGATGAAGGAGGTCCATCAACGATGTGGGGAGAACGACAGCGCCATCTGGAGTGCAAAGTTCTGAACTGAAGGAACATAATGCCCAACAACAACTTTGCACTCTTGAACACAAGCAGCACATATATATATAGATACAAGATACAACTCGTGATTCAACAGTGTGAGTAACCAATCATCTGAGCAGAGGAATCCCTGAAGATGATGAACGGAAAGAACAGTCGATTGATGGCAGTTTCAGAGATCATGGGATGAGTGTACACTCAAGTGTACAAGCATGGCCGACAGGATGGGTTCTTCTGCTGCTTTTTTTTTCTTGTTTCTTTTTTTTTTCTTTTGGTGGTTTTCAGTAGGTATTGTATTGTTTTAGGGGATCTTTTCTGTTTTGTGGTCGAAAAGATCCCTGGAAATTACCCATAAAGATGGAGAAGGTGAGGAGGGAAAGAGTGAAAGGAGAGGGAGATCGAGAGGGGTCTCCCCCCACCATTCTTGGAAAGATGTTCATCACCGTTTCTGATTAATTT                                   ]
[+] EMBL CB656789             [                                                                                                                                                                                                                                                                                                                            GGGACATTGGATCCATAGGTGAGGGCGTGTGAATTGGAGACTGATTAGAGAGCTAGGCGAGCGAGGAGGAAGAAGAGATCAGGTGAAGATGAGCTTCAACAAGAGCAGGGGGGGAGCAGCGGTGCTCGGCGGAGGGGACGAGCTGGTGCTCCGTGGCACCATCTCCAAGAAATGGACCCTCCTCCTCTGCCTCGCCAGCTTCTGCATCGGCCTCATCTTCACCAACAGGATGTGGACAATGCCAGAACCAAAAGAGATCATCAGGAGATCGGCTCTAGAAGTGAACAAGATGAACCTGTTGTCTGGTGACTGTGCTCCGAAAAGTGTTATGGAGCAAAAAGATATAATTGGAGAGGTCCCAAGAACTCAGGATGCTATACAGGCATTGGACAAAACAATATCAAACTTAGAAATGGAGTTAGCATCAGCAAAGGCGTCACAGGAGGAGTCTGAGCTCAATGGAGCGCCGCTATCAGAATCTACGGGGAAACGGAGATACTTCATGGTCATTGGCATCAACACCGCATTCAGCAGCCGGAAACGAAGAGATTCACTTCGTGCTACGTGGATGCCTCAAGGTG AAAAAAGAAGGAAGCTTGAGGAAGAAAAGGGAATTATCATCCGATTCGTCATTGGTCATAGCGCAACATCTGGTGGCATACTCGATAGAGCTATAGACGCAGAAGATAGGAAACATGGTGACTTCATGAGATTGGATCATGTTGAAGGGTATCTGGAATTGGCTGCAAAGACGAAATCGTTCTTTGTGACAGCCTTGTCCATGTGGGATGCAGAGTACTACATTAAAGTGGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK119639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGAGGGGACGAGCTGGTGCTCCGTGGCACCATCTCCAAGAAATGGACCCTCCTCCTCTGCCTCGCCAGCTTCTGCATCGGCCTCATCTTCACCAACAGGATGTGGACAATGCCAGAACCAAAAGAGATCATCAGGAGATCGGCTCTAGAAGTGAACAAGATGAACCTGTTGTCTGGTGACTGTGCTCCGAAAAGTGTTATGGAGCAAAAAGATATAATTGGAGAGGTCCCAAGAACTCAGGATGCTATACAGGCATTGGACAAAACAATATCAAACTTAGAAATGGAGTTAGCATCAGCAAAGGCGTCACAGGAGGAGTCTGAGCTCAATGGAGCGCCGCTATCAGAATCTACGGGGAAACGGAGATACTTCATGGTCATTGGCATCAACACCGCATTCAGCAGCCGGAAACGAAGAGATTCACTTCGTGCTACGTGGATGCCTCAAGGTG AAAAAAGAAGGAAGCTTGAGGAAGAAAAGGGAATTATCATCCGATTCGTCATTGGTCATAGCGCAACATCTGGTGGCATACTCGATAGAGCTATAGACGCAGAAGATAGGAAACATGGTGACTTCATGAGATTGGATCATGTTGAAGGGTATCTGGAATTGGCTGCAAAGACGAAATCGTTCTTTGTGACAGCCTTGTCCATGTGGGATGCAGAGTACTACATTAAAGTGGATGATGATGTACATGTAAATATAGCAACTCTTGGTAACATATTGGCTAAGCATCGGTCGAAGCCTCGAGCTTACATTGGTTGCATGAAATCTGGTCCAGTCCTGGCTCAGAAGGGTGTAAGATACCATGAGCCCGAGTACTGGAAATTCGGCGAATGGGGGAACAAGTACTTCCGTCATGCAACCGGCCAGTTATATGCAATCTCCAAGGATCTAGCTTCTTATATATCAATCAACCAGCATGTTCTCCACAAATATGCTAATGAGGATGTATCATTAGGAGCATGGTTCATAGGTCTAGACGTCGAACACGTCGATGATCGCAGGCTTTGCTGCGGTACACAACCAGATTGCGAATGGAAGGCGCAGGCAGGCAACGTGTGCGCCGCGTCGTTCGACTGGAGCTGCAGCGGCATCTGCAAATCGGCGGATCGGATGAAGGAGGTCCATCAACGATGTGGGGAGAACGACAGCGCCATCTGGAGTGCAAAGTTCTGAACTGAAGGAACATAATGCCCAACAACAACTTTGCACTCTTGAACACAAGCAGCACATATATATATAGATACAAGATACAACTCGTGATTCAACAGTGTGAGTAACCAATCATCTGAGCAGAGGAATCCCTGAAGATGATGAACGGAAAGAACAGTCGATTGATGGCAGTTTCAGAGATCATGGGATGAGTGTACACTCAAGTGTACAAGCATGGCCGACAGGATGGGTTCTTCTGCTGCTTTTTTTTTCTTGTTTCTTTTTTTTTTCTTTTGGTGGTTTTCAGTAGGTATTGTATTGTTTTAGGGGATCTTTTCTGTTTTGTGGTCGAAAAGATCCCTGGAAATTACCCATAAAGATGGAGAAGGTGAGGAGGGAAAGAGTGAAAGGAGAGGGAGATCGAGAGGGGTCTCCCCCCACCATTCTTGGAAAGATGTTCATCACCGTTTCTGATTAATTTTCTCTGGAATAACATAATAAGAAGCTCATCTTCTC]




>consensus_4939#0
TTCCCTCCCCCGGACTCCACTCTACACCCTTCACGCGCGCGAGCACGCACGCAGTTGGTG
CATCCTTTCCCTCGTCTCCATCTCCATATCAGCCTTCCCCTTCACCCCAAAGGCACCTGC
CACTGGCAGCAGGCGGCTTCAAGAACCAAAGAATCTTGACACACAGAGATAGAGAGAGAG
GAAATTAAAGGTAATATTAGTAGTAGTGAGTAGTGACTTGATCTTGACAAAAGTTAGAGG
AGCAGCAGGAGGAGCAGGAGGGTGGAGGGACCATATTTCTGGTTCTTGGAGTGTGATCAT
GAGGTCTCCGAGATCGGGGAGACAGGATCCATAGGTGAGGGCGTGTGAATTGGAGACTGA
TTAGAGAGCTAGGCGAGCGAGGAGGAAGAAGAGATCAGGTGAAGATGAGCTTCAACAAGA
GCAGGGGGGGAGCAGCGGTGCTCGGCGGAGGGGACGAGCTGGTGCTCCGTGGCACCATCT
CCAAGAAATGGACCCTCCTCCTCTGCCTCGCCAGCTTCTGCATCGGCCTCATCTTCACCA
ACAGGATGTGGACAATGCCAGAACCAAAAGAGATCATCAGGAGATCGGCTCTAGAAGTGA
ACAAGATGAACCTGTTGTCTGGTGACTGTGCTCCGAAAAGTGTTATGGAGCAAAAAGATA
TAATTGGAGAGGTCCCAAGAACTCAGGATGCTATACAGGCATTGGACAAAACAATATCAA
ACTTAGAAATGGAGTTAGCATCAGCAAAGGCGTCACAGGAGGAGTCTGAGCTCAATGGAG
CGCCGCTATCAGAATCTACGGGGAAACGGAGATACTTCATGGTCATTGGCATCAACACCG
CATTCAGCAGCCGGAAACGAAGAGATTCACTTCGTGCTACGTGGATGCCTCAAGGTGAAA
AAAGAAGGAAGCTTGAGGAAGAAAAGGGAATTATCATCCGATTCGTCATTGGTCATAGCG
CAACATCTGGTGGCATACTCGATAGAGCTATAGACGCAGAAGATAGGAAACATGGTGACT
TCATGAGATTGGATCATGTTGAAGGGTATCTGGAATTGGCTGCAAAGACGAAATCGTTCT
TTGTGACAGCCTTGTCCATGTGGGATGCAGAGTACTACATTAAAGTGGATGATGATGTAC
ATGTAAATATAGCAACTCTTGGTAACATATTGGCTAAGCATCGGTCGAAGCCTCGAGCTT
ACATTGGTTGCATGAAATCTGGTCCAGTCCTGGCTCAGAAGGGTGTAAGATACCATGAGC
CCGAGTACTGGAAATTCGGCGAATGGGGGAACAAGTACTTCCGTCATGCAACCGGCCAGT
TATATGCAATCTCCAAGGATCTAGCTTCTTATATATCAATCAACCAGCATGTTCTCCACA
AATATGCTAATGAGGATGTATCATTAGGAGCATGGTTCATAGGTCTAGACGTCGAACACG
TCGATGATCGCAGGCTTTGCTGCGGTACACAACCAGATTGCGAATGGAAGGCGCAGGCAG
GCAACGTGTGCGCCGCGTCGTTCGACTGGAGCTGCAGCGGCATCTGCAAATCGGCGGATC
GGATGAAGGAGGTCCATCAACGATGTGGGGAGAACGACAGCGCCATCTGGAGTGCAAAGT
TCTGAACTGAAGGAACATAATGCCCAACAACAACTTTGCACTCTTGAACACAAGCAGCAC
ATATATATATAGATACAAGATACAACTCGTGATTCAACAGTGTGAGTAACCAATCATCTG
AGCAGAGGAATCCCTGAAGATGATGAACGGAAAGAACAGTCGATTGATGGCAGTTTCAGA
GATCATGGGATGAGTGTACACTCAAGTGTACAAGCATGGCCGACAGGATGGGTTCTTCTG
CTGCTTTTTTTTTCTTGTTTCTTTTTTTTTTCTTTTGGTGGTTTTCAGTAGGTATTGTAT
TGTTTTAGGGGATCTTTTCTGTTTTGTGGTCGAAAAGATCCCTGGAAATTACCCATAAAG
ATGGAGAAGGTGAGGAGGGAAAGAGTGAAAGGAGAGGGAGATCGAGAGGGGTCTCCCCCC
ACCATTCTTGGAAAGATGTTCATCACCGTTTCTGATTAATTTTCTCTGGAATAACATAAT
AAGAAGCTCATCTTCTC
clustalw multiple alignements is not computed in this case