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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 494 cluster # 494       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_494#0 length = 779 sequences # 2  

consensusID : consensus_494#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 779
fasta sequence
                              [ATGCCCGTCTACCTGGCTCTTGTAAATGAGGGAGATCATTTATTCTTTTGTTTGGCCAGAAAAATCACCAGCCAAATTCATTATGAAAGAAAGGAGAGTGTAGGGTACAAAGTTACTGCAACAAGGTTGTTGTTACGGCTTATTTGATTTTTTTACTTCAGCAACTGGAGGTTGAAAGATCAGGAACGTTCATAGTACCATCTAACTGGAGGAGTGGTATTAATATGACCAAATCTCCCGCAGAGATCTCCACCCAAAGGTGAATTTATTTAACCCTATGACTTTTCCATGGTTAGTGTCTCCAATGGCCACTCAACTACAGTTGATGCTATTGTG-ACACTGCAAGCAAGATTATTTGGCAGGATGCGCAGGTGTAAATCAGACTGCAAT-GTCGCTTAAGCGCAGGACCGTCGTAGCAACTGCAGCTAGATCATACTCCCTCCATCCCATAAAAAACCAACCTAATACTTGATGTTGACACATCATAGTATTACGAATCTAGACATATCGCTATCCAGATACGTAGTATTAGGATGTGTCAACGTCCAGTACTAGATTGGTTTTTTATGGGTACGCGATTTAGAATTTTGTTGTCCTTCTATCATTCGGTATAGGCGACGGTTGCAGACTTGCAGATCACAACACCCTCCGTCAGACCATCACTCAGTAAGTATGCAGGTAGTTTCTTTTAGCTTTAGGTGTAGGAGTGCAGGACATTGTATAGCTTACACGTAATTTTACATGTACAAACACTCGTTGGTATCATGACAAATCTGGAA]

[+] EMBL AK110747             [ATGCCCGTCTACCTGGCTCTTGTAAATGAGGGAGATCATTTATTCTTTTGTTTGGCCAGAAAAATCACCAGCCAAATTCATTATGAAAGAAAGGAGAGTGTAGGGTACAAAGTTACTGCAACAAGGTTGTTGTTACGGCTTATTTGATTTTTTTACTTCAGCAACTGGAGGTTGAAAGATCAGGAACGTTCATAGTACCATCTAACTGGAGGAGTGGTATTAATATGACCAAATCTCCCGCAGAGATCTCCACCCAAAGGTGAATTTATTTAACCCTATGACTTTTCCATGGTTAGTGTCTCCAATGGCCACTCAACTACAGTTGATGCTATTGTG ACACTGCAAGCAAGATTATTTGGCAGGATGCGCAGGTGTAAATCAGACTGCAAT GTCGCTTAAGCGCAGGACCGTCGTAGCAACTGCAGCTAGATCATACTCCCTCCATCCCATAAAAAACCAACCTAATACTTGATGTTGACACATCATAGTATTACGAATCTAGACATATCGCTATCCAGATACGTAGTATTAGGATGTGTCAACGTCCAGTACTAGATTGGTTTTTTATGGGTACGCGATTTAGAATTTTGTTGTCCTTCTATCATTCGGTATAGGCGACGGTTGCAGACTTGCAGATCACAACACCCTCCGTCAGACCATCACTCAGTAAGTATGCAGGTAGTTTCTTTTAGCTTTAGGTGTAGGAGTGCAGGACATTGTATAGCTTACACGTAATTTTACATGTACAAACACTCGTTGGTATCATGACAAATCTGGAA]
[+] EMBL C93626               [                                                         AGAGAAATCACCAGCCAAATTCATTATGAAAGAAAGGGGAGTGTAGGGTACAAAGTTACT CAACAAGGTTGTTGTTACAGCTTATTT AATTTTTAACTTCAGCAACTGGAGGTTGAAAGAGCAGGAACGTTCATAGTACCATCTAACTGGAGAAGTGGTATTAATGTGACCAAATCTCCCGCAGAGATCTCCACCCAAAGGTGAATTTNTTTAACCCTATGANTTTNCCATGGTTAGTGTCTCCAATGGCCGCTCAACTACAGTTGGTGCTATTGTGAACACTGCAAGCAAGATTATTTGGCAGGATGCGCAGGTGTAAATCAGCCTGCAATGGTCGCTTAAGGGC                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_494#0 ATGCCCGTCTACCTGGCTCTTGTAAATGAGGGAGATCATTTATTCTTTTGTTTGGCCAGA AAAATCACCAGCCAAATTCATTATGAAAGAAAGGAGAGTGTAGGGTACAAAGTTACTGCA ACAAGGTTGTTGTTACGGCTTATTTGATTTTTTTACTTCAGCAACTGGAGGTTGAAAGAT CAGGAACGTTCATAGTACCATCTAACTGGAGGAGTGGTATTAATATGACCAAATCTCCCG CAGAGATCTCCACCCAAAGGTGAATTTATTTAACCCTATGACTTTTCCATGGTTAGTGTC TCCAATGGCCACTCAACTACAGTTGATGCTATTGTGACACTGCAAGCAAGATTATTTGGC AGGATGCGCAGGTGTAAATCAGACTGCAATGTCGCTTAAGCGCAGGACCGTCGTAGCAAC TGCAGCTAGATCATACTCCCTCCATCCCATAAAAAACCAACCTAATACTTGATGTTGACA CATCATAGTATTACGAATCTAGACATATCGCTATCCAGATACGTAGTATTAGGATGTGTC AACGTCCAGTACTAGATTGGTTTTTTATGGGTACGCGATTTAGAATTTTGTTGTCCTTCT ATCATTCGGTATAGGCGACGGTTGCAGACTTGCAGATCACAACACCCTCCGTCAGACCAT CACTCAGTAAGTATGCAGGTAGTTTCTTTTAGCTTTAGGTGTAGGAGTGCAGGACATTGT ATAGCTTACACGTAATTTTACATGTACAAACACTCGTTGGTATCATGACAAATCTGGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)