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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4940#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2073 fasta sequence
[TCCGATCGACGCCTCCGCTTGACGGAAGGAAACAGAGGGGAAGAGAGAGGATCGTCGTCGACGATGATGAGGCGGCGGCTGGGCTGAAAGAGAAACAGCATCTCTTGAGGATCGTCGTTTCGTTGCATGGGCAACTACTACTCGTGCGGCGCCTCGTCCACGTCCAGCCCGACCTCACCGTCCTTGGTCGACTACTACTACTGCTATCATCGGTATCCAAGCAGTTGCAGTAGTACAAGCACAGCAACAAGTAGCGGGGGGAGGATGCCGATCCGCAGCCACCAGCAGAGGCTGTCGTCCCCGACGGCGGTGCTGGGGCACGAGACGCCGGCGCTGCGGGAGGTGTACACGGTGGGGCGGAAGCTGGGGCAGGGGCAGTTCGGGACGACGTACCTGTGCACGCAGGTGTCGACGGGGGCGGAGTACGCGTGCAAGTCGATCGCGAAGAGGAAGCTGCTGAGCCCGGAGGACGTGGAGGACGTGCGGCGGGAGATACAGATAATGCACCACCTGGCGGGGCACGGGAGCGTGGTGACCATCCAGGGCGCGTACGAGGACAACCTGTACGTGCACATCGTGATGGAGCTGTGCGAGGGCGGGGAGCTGTTCGACCGCATCGTGGAGCGCGGCTACTTCTCGGAGCGCAAGGCCGCGGAGATCACGCGCGTCATCGTCGGGGTGGTGGAGGCGTGCCACTCCCTGGGCGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCAAGGAATCCTCCTCCTCCTCCTCGCTCAAGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGGCAGGTGTTCAGCGACGTGGTGGGGAGCCCCTACTACGTGGCGCCGGAGGTGCTGTGCAAGCACTACGGCCCCGAGGCGGACGTGTGGACGGCGGGCGTCATCGTCTACATCCTCCTCAGCGGGGTGCCCCCCTTCTGGGCGGAGACGCAGCAGGGCATCTTCGACGCCGTCCTCCGGGGATCCCTCGACTTCGACTCCGACCCATGGCCCACCATCTCCGACAGCGCCAAGGACCTCATCCGCCGCATGCTCCGCTCCCCGCCCAGGGAACGCCTCACCGCCCACCAGGTGCTTTGCCACCCCTGGGTCTGCGACGACGGCGTCGCCCCCGACCGCCCCCTCGCCCCCGCCGTCCTCTCCCGCCTCAAGCAGTTCTCCGCCATGAACAGGCTCAAGAAGATGGCGCTGCGTGTCATCGCCCGGAACCTCTCCGAGGAGGAGCTCGCTGGCCTCAAGGAGATGTTCAAGGCCATGGACACCGACGCCAGCGGCGCCATCACCTTCGACGAGCTCAAGGAAGGACTCCGCAGATACGGCTCCAACCTCAGGGAGGCTGAGATCAGGGATCTCATGGACGCCGCCGACGTTGACAAAGCGGCACCATCGACTACGACGAGTTCATCGCCGCCACCGTCCACCTCAACAAGCTGGAGCGCGAGGAGCACCTGCTCGCCGCCTTCGCCTACTTCGACCGCGACGGCAGCGGCTACATCACCGTCGACGAGCTCGAGCACGCCTGCAGGGACCACAACATGGCCGACGTTGGCATCGACGACATCATCCGCGAAGTCGACCAAGACAACGACGGCCGCATCGACTACGGCGAGTTCGTCGCAATGATGAAGAAGGGCGCTATCGATATCATCGGCAACGGAAGGCTCACCATTGGAAGGCCAACTACGGCTACTTCCGACGATCCTTCTCCAACAATCTCTTCTTCCTCTAGATGATGCATCAACGCCAAACAAACAAACAATGCAAATATGGTTCCCAATTACTTCAATTCACAACTCCGACTCACGGATCGCTCGCATGGCATGCTAGCTAGTAGCATATACTCTATACTCTCAAGATTCATCATTCTTTTTATACCATGCATACAGCTGATTATTTCTTGGGATAGAATAAAATTAAGGGCATATACCTCCAGAGATCGATCAATCTATGCATGTATATGGTTTTGTTGCGGATACATGCATGCCAACGGAAGCAATTTGTATATGTGGGTACCTGATCCAAGAGAGTGCATATAAAGCAATT]
[+] EMBL AK069127 [TCCGATCGACGCCTCCGCTTGACGGAAGGAAACAGAGGGGAAGAGAGAGGATCGTCGTCGACGATGATGAGGCGGCGGCTGGGCTGAAAGAGAAACAGCATCTCTTGAGGATCGTCGTTTCGTTGCATGGGCAACTACTACTCGTGCGGCGCCTCGTCCACGTCCAGCCCGACCTCACCGTCCTTGGTCGACTACTACTACTGCTATCATCGGTATCCAAGCAGTTGCAGTAGTACAAGCACAGCAACAAGTAGCGGGGGGAGGATGCCGATCCGCAGCCACCAGCAGAGGCTGTCGTCCCCGACGGCGGTGCTGGGGCACGAGACGCCGGCGCTGCGGGAGGTGTACACGGTGGGGCGGAAGCTGGGGCAGGGGCAGTTCGGGACGACGTACCTGTGCACGCAGGTGTCGACGGGGGCGGAGTACGCGTGCAAGTCGATCGCGAAGAGGAAGCTGCTGAGCCCGGAGGACGTGGAGGACGTGCGGCGGGAGATACAGATAATGCACCACCTGGCGGGGCACGGGAGCGTGGTGACCATCCAGGGCGCGTACGAGGACAACCTGTACGTGCACATCGTGATGGAGCTGTGCGAGGGCGGGGAGCTGTTCGACCGCATCGTGGAGCGCGGCTACTTCTCGGAGCGCAAGGCCGCGGAGATCACGCGCGTCATCGTCGGGGTGGTGGAGGCGTGCCACTCCCTGGGCGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCAAGGAATCCTCCTCCTCCTCCTCGCTCAAGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGGCAGGTGTTCAGCGACGTGGTGGGGAGCCCCTACTACGTGGCGCCGGAGGTGCTGTGCAAGCACTACGGCCCCGAGGCGGACGTGTGGACGGCGGGCGTCATCGTCTACATCCTCCTCAGCGGGGTGCCCCCCTTCTGGGCGGAGACGCAGCAGGGCATCTTCGACGCCGTCCTCCGGGGATCCCTCGACTTCGACTCCGACCCATGGCCCACCATCTCCGACAGCGCCAAGGACCTCATCCGCCGCATGCTCCGCTCCCCGCCCAGGGAACGCCTCACCGCCCACCAGGTGCTTTGCCACCCCTGGGTCTGCGACGACGGCGTCGCCCCCGACCGCCCCCTCGCCCCCGCCGTCCTCTCCCGCCTCAAGCAGTTCTCCGCCATGAACAGGCTCAAGAAGATGGCGCTGCGTGTCATCGCCCGGAACCTCTCCGAGGAGGAGCTCGCTGGCCTCAAGGAGATGTTCAAGGCCATGGACACCGACGCCAGCGGCGCCATCACCTTCGACGAGCTCAAGGAAGGACTCCGCAGATACGGCTCCAACCTCAGGGAGGCTGAGATCAGGGATCTCATGGACGCCGCCGACGTTGACAAAGCGGCACCATCGACTACGACGAGTTCATCGCCGCCACCGTCCACCTCAACAAGCTGGAGCGCGAGGAGCACCTGCTCGCCGCCTTCGCCTACTTCGACCGCGACGGCAGCGGCTACATCACCGTCGACGAGCTCGAGCACGCCTGCAGGGACCACAACATGGCCGACGTTGGCATCGACGACATCATCCGCGAAGTCGACCAAGACAACGACGGCCGCATCGACTACGGCGAGTTCGTCGCAATGATGAAGAAGGGCGCTATCGATATCATCGGCAACGGAAGGCTCACCATTGGAAGGCCAACTACGGCTACTTCCGACGATCCTTCTCCAACAATCTCTTCTTCCTCTAGATGATGCATCAACGCCAAACAAACAAACAATGCAAATATGGTTCCCAATTACTTCAATTCACAACTCCGACTCACGGATCGCTCGCATGGCATGCTAGCTAGTAGCATATACTCTATACTCTCAAGATTCATCATTCTTTTTATACCATGCATACAGCTGATTATTTCTTGGGATAGAATAAAATTAAGGGCATATACCTCCAGAGATCGATCAATCTATGCATGTATATGGTTTTGTTGCGGATACATGCATGCCAACGGAAGCAATTTGTATATGTGGGTACCTGATCCAAGAGAGTGCATATAAAGCAATT]
consensusID : consensus_4940#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1700 fasta sequence
[TGAGGTTTGTATTGTACGAGTACAGTATGTTGTGGAAGGCCTTTGAATTATATTGCATTACAGTTTGCAGGTAGGTAAAGCTTGTGTAATCAATCATTGATCGCCAGTGAGGGAAGGAAGGGAGGAGGCATGCGCGCACGTCGGTCCAAGGAAGGGTAGCGCGGCGCACACCACTCGCTCGCCAAGGTTGGAAGGAGCGTGCGGCCCTGTTTCCCGGCACCTCTTTCTCCTTAATTCCCTGCCATCTGCATGCGTTCATCTGCAGATCGACTCCGATCGACGCCTCCGCTTGACGGAAGGAAACAGAGGGGAAGAGAGAGGATCGTCGTCGACGATGATGCGGCGGCGGCTGGGCTGAAAGAGAAACAGCATCTCTTGAGGATCGTCGTTTCGTTGCATGGGCAACTACTACTCGTGCGGCGCCTCGTCCACGTCCAGCCCGACCTCACCGTCCTTGGTCGACTACTACTACTGCTATCATCGGTATCCAAGCAGTTGCAGTAGTACAAGCACAGCAACAAGTAGCGGGGGGAGGATGCCGATCCGCAGCCACCAGCAGAGGCTGTCGTCCCCGACGGCGGTGCTGGGGCACGAGACGCCGGCGCTGCGGGAGGTGTACACGGTGGGGCGGAAGCTGGGGCAGGGGCAGTTCGGGACGACGTACCTGTGCACGCAGGTGTCGACGGGGGCGGAGTACGCGTGCAAGTCGATCGCGAAGAGGAAGCTGCTGAGCCCGGAGGACGTGGAGGACGTGCGGCGGGAGATACAGATAATGCACCACCTGGCGGGGCACGGGAGCGTGGTGACCATCCAGGGCGCGTACGAGGACAACCTGTACGTGCACATCGTGATGGAGCTGTGCGAGGGCGGGGAGCTGTTCGACCGCATCGTGGAGCGCGGCTACTTCTCGGAGCGCAAGGCCGCGGAGATCACGCGCGTCATCGTCGGGGTGGTGGAGGCGTGCCACTCCCTGGGCGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCAAGGAATCCTCCTCCTCCTCGCTCAAGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGGCAGGTGTTCAGCGACGTGGTGGGGAGCCCCTACTACGTGGCGCCGGAGGTGCTGTGCAAGCACTACGGCCCCGAGGCGGACGTGTGGACGGCGGGCGTCATCGTCTACATCCTCCTCAGCGGGGTGCCCCCCTTCTGGGCGGAGACGCAGCAGGGCATCTTCGACGCCGTCCTCCGGGGATCCCTCGACTTCGACTCCGACCCATGGCCCACCATCTCCGACAGCGCCAAGGACCTCATCCGCCGCATGCTCCGCTCCCCGCCCAGGGAACGCCTCACCGCCCACCAGGTGCTTTGCCACCCCTGGGTCTGCGACGACGGCGTCGCCCCCGACCGCCCCCTCGCCCCCGCCGTCCTCTCCCGCCTCAAGCAGTTCTCCGCCATGAACAGGCTCAAGAAGATGGCGCTGCGTGTCATCGCCCGGAACCTCTCCGAGGAGGAGCTCGCTGGCCTCAAGGAGATGTTCAAGGCCATGGACACCGACGCCAGCGGCGCCATCACCTTCGACGAGCTCAAGGAAGGACTCCGCAGATACGGCTCCAACCTCAGGGAGGCTGAGATCAGGGATCTCATGGACGCCGTAAGACCGTCCTCACTTCTCTCAATCTCTCAATCTTCTT]
[-] EMBL AK109754 [TGAGGTTTGTATTGTACGAGTACAGTATGTTGTGGAAGGCCTTTGAATTATATTGCATTACAGTTTGCAGGTAGGTAAAGCTTGTGTAATCAATCATTGATCGCCAGTGAGGGAAGGAAGGGAGGAGGCATGCGCGCACGTCGGTCCAAGGAAGGGTAGCGCGGCGCACACCACTCGCTCGCCAAGGTTGGAAGGAGCGTGCGGCCCTGTTTCCCGGCACCTCTTTCTCCTTAATTCCCTGCCATCTGCATGCGTTCATCTGCAGATCGACTCCGATCGACGCCTCCGCTTGACGGAAGGAAACAGAGGGGAAGAGAGAGGATCGTCGTCGACGATGATGCGGCGGCGGCTGGGCTGAAAGAGAAACAGCATCTCTTGAGGATCGTCGTTTCGTTGCATGGGCAACTACTACTCGTGCGGCGCCTCGTCCACGTCCAGCCCGACCTCACCGTCCTTGGTCGACTACTACTACTGCTATCATCGGTATCCAAGCAGTTGCAGTAGTACAAGCACAGCAACAAGTAGCGGGGGGAGGATGCCGATCCGCAGCCACCAGCAGAGGCTGTCGTCCCCGACGGCGGTGCTGGGGCACGAGACGCCGGCGCTGCGGGAGGTGTACACGGTGGGGCGGAAGCTGGGGCAGGGGCAGTTCGGGACGACGTACCTGTGCACGCAGGTGTCGACGGGGGCGGAGTACGCGTGCAAGTCGATCGCGAAGAGGAAGCTGCTGAGCCCGGAGGACGTGGAGGACGTGCGGCGGGAGATACAGATAATGCACCACCTGGCGGGGCACGGGAGCGTGGTGACCATCCAGGGCGCGTACGAGGACAACCTGTACGTGCACATCGTGATGGAGCTGTGCGAGGGCGGGGAGCTGTTCGACCGCATCGTGGAGCGCGGCTACTTCTCGGAGCGCAAGGCCGCGGAGATCACGCGCGTCATCGTCGGGGTGGTGGAGGCGTGCCACTCCCTGGGCGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCAAGGAATCCTCCTCCTCCTCGCTCAAGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGGCAGGTGTTCAGCGACGTGGTGGGGAGCCCCTACTACGTGGCGCCGGAGGTGCTGTGCAAGCACTACGGCCCCGAGGCGGACGTGTGGACGGCGGGCGTCATCGTCTACATCCTCCTCAGCGGGGTGCCCCCCTTCTGGGCGGAGACGCAGCAGGGCATCTTCGACGCCGTCCTCCGGGGATCCCTCGACTTCGACTCCGACCCATGGCCCACCATCTCCGACAGCGCCAAGGACCTCATCCGCCGCATGCTCCGCTCCCCGCCCAGGGAACGCCTCACCGCCCACCAGGTGCTTTGCCACCCCTGGGTCTGCGACGACGGCGTCGCCCCCGACCGCCCCCTCGCCCCCGCCGTCCTCTCCCGCCTCAAGCAGTTCTCCGCCATGAACAGGCTCAAGAAGATGGCGCTGCGTGTCATCGCCCGGAACCTCTCCGAGGAGGAGCTCGCTGGCCTCAAGGAGATGTTCAAGGCCATGGACACCGACGCCAGCGGCGCCATCACCTTCGACGAGCTCAAGGAAGGACTCCGCAGATACGGCTCCAACCTCAGGGAGGCTGAGATCAGGGATCTCATGGACGCCGTAAGACCGTCCTCACTTCTCTCAATCTCTCAATCTTCTT]
consensusID : consensus_4940#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 487 fasta sequence
[AGAGGGCGAGCCAAGGGGACTACGGCGAGTTCGTCGCAATGATGAAGAAGGGCGCTATCGATATCATCGGCAACGGAAGGCTCACCATTGGAAGGCCAACTACGGCTACTTCCGACGATCCTTCTCCAACAATCTCTTCTTCCTCTAGATGATGCATCAACGCCAAACAAACAAACAATGCAAATATGGTTCCCAATTACTTCAATTCACAACTCCGACTCACGGATCGCTCGCATGGCATGCTAGCTAGTAGCATATACTCTATACTCTCAAGATTCATCATTCTTTTTATACCATGCATACAGCTGATTATTTCTTGGGATAGAATAAAATTAAGGGCATATACCTCCAGAGATCGATCAATCTATGCATGTATATGGTTTTGTTGCGGATACATGCATGCCAACGGAAGCAATTTGTATATGTGGGTACCTGATCCAAGAGAGTGCATATAAAGCAATTTTTCCTGTGTAAAAAAAAAAAAAAA]
[-] EMBL CA761270 [AGAGGGCGAGCCAAGGGGACTACGGCGAGTTCGTCGCAATGATGAAGAAGGGCGCTATCGATATCATCGGCAACGGAAGGCTCACCATTGGAAGGCCAACTACGGCTACTTCCGACGATCCTTCTCCAACAATCTCTTCTTCCTCTAGATGATGCATCAACGCCAAACAAACAAACAATGCAAATATGGTTCCCAATTACTTCAATTCACAACTCCGACTCACGGATCGCTCGCATGGCATGCTAGCTAGTAGCATATACTCTATACTCTCAAGATTCATCATTCTTTTTATACCATGCATACAGCTGATTATTTCTTGGGATAGAATAAAATTAAGGGCATATACCTCCAGAGATCGATCAATCTATGCATGTATATGGTTTTGTTGCGGATACATGCATGCCAACGGAAGCAATTTGTATATGTGGGTACCTGATCCAAGAGAGTGCATATAAAGCAATTTTTCCTGTGTAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4940#0 TCCGATCGACGCCTCCGCTTGACGGAAGGAAACAGAGGGGAAGAGAGAGGATCGTCGTCG 60
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ------------------------------------------------------------
consensus_4940#0 ACGATGATGAGGCGGCGGCTGGGCTGAAAGAGAAACAGCATCTCTTGAGGATCGTCGTTT 120
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ------------------------------------------------------------
consensus_4940#0 CGTTGCATGGGCAACTACTACTCGTGCGGCGCCTCGTCCACGTCCAGCCCGACCTCACCG 180
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ------------------------------------------------------------
consensus_4940#0 TCCTTGGTCGACTACTACTACTGCTATCATCGGTATCCAAGCAGTTGCAGTAGTACAAGC 240
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ------------------------------------------------------------
consensus_4940#0 ACAGCAACAAGTAGCGGGGGGAGGATGCCGATCCGCAGCCACCAGCAGAGGCTGTCGTCC 300
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ------------------------------------------------------------
consensus_4940#0 CCGACGGCGGTGCTGGGGCACGAGACGCCGGCGCTGCGGGAGGTGTACACGGTGGGGCGG 360
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ------------------------------------------------------------
consensus_4940#0 AAGCTGGGGCAGGGGCAGTTCGGGACGACGTACCTGTGCACGCAGGTGTCGACGGGGGCG 420
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ------------------------------------------------------------
consensus_4940#0 GAGTACGCGTGCAAGTCGATCGCGAAGAGGAAGCTGCTGAGCCCGGAGGACGTGGAGGAC 480
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ------------------------------------------------------------
consensus_4940#0 GTGCGGCGGGAGATACAGATAATGCACCACCTGGCGGGGCACGGGAGCGTGGTGACCATC 540
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ----TGAGGTTTGTATTGTACGAGTACAGTATGTTGTGGAAGGCCTTTGAATTATATTGC 56
consensus_4940#0 CAGGGCGCGTACGAGGACAACCTGTACGTGCACATCGTGATGGAGCTGTGCGAGGGCGGG 600
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ATTACAGTTTGCAGGTAGGTAAAGCTTGTGTAATCAATCATTGATCGCCAGTGAGGGAAG 116
consensus_4940#0 GAGCTGTTCGACCGCATCGTGGAGCGCGGCTACTTCTCGGAGCGCAAGGCCGCGGAGATC 660
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 GAAGGGAGGAGGCATGCGCGCACGTCGGTCCAAGGAAGGGTAGCGCGGCGCACACCACTC 176
consensus_4940#0 ACGCGCGTCATCGTCGGGGTGGTGGAGGCGTGCCACTCCCTGGGCGTCATGCACCGCGAC 720
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 GCTCGCCAAGGTTGGAAGGAGCGTGCGGCCCTGTTTCCCGGCACCTCTTTCTCCTTAATT 236
consensus_4940#0 CTCAAGCCCGAGAACTTCCTCCTCAAGGAATCCTCCTCCTCCTCCTCGCTCAAGGCCATC 780
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 CCCTGCCATCTGCATGCGTTCATCTGCAGATCGACTCCGATCGACGCCTCCGCTTGACGG 296
consensus_4940#0 GACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGGCAGGTGTTCAGCGACGTGGTGGGGAGC 840
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 AAGGAAACAGAGGGGAAGAGAGAGGATCGTCGTCGACGATGATGCGGCGGCGGCTGGGCT 356
consensus_4940#0 CCCTACTACGTGGCGCCGGAGGTGCTGTGCAAGCACTACGGCCCCGAGGCGGACGTGTGG 900
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 GAAAGAGAAACAGCATCTCTTGAGGATCGTCGTTTCGTTGCATGGGCAACTACTACTCGT 416
consensus_4940#0 ACGGCGGGCGTCATCGTCTACATCCTCCTCAGCGGGGTGCCCCCCTTCTGGGCGGAGACG 960
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 GCGGCGCCTCGTCCACGTCCAGCCCGACCTCACCGTCCTTGGTCGACTACTACTACTGCT 476
consensus_4940#0 CAGCAGGGCATCTTCGACGCCGTCCTCCGGGGATCCCTCGACTTCGACTCCGACCCATGG 1020
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ATCATCGGTATCCAAGCAGTTGCAGTAGTACAAGCACAGCAACAAGTAGCGGGGGGAGGA 536
consensus_4940#0 CCCACCATCTCCGACAGCGCCAAGGACCTCATCCGCCGCATGCTCCGCTCCCCGCCCAGG 1080
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 TGCCGATCCGCAGCCACCAGCAGAGGCTGTCGTCCCCGACGGCGGTGCTGGGGCACGAGA 596
consensus_4940#0 GAACGCCTCACCGCCCACCAGGTGCTTTGCCACCCCTGGGTCTGCGACGACGGCGTCGCC 1140
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 CGCCGGCGCTGCGGGAGGTGTACACGGTGGGGCGGAAGCTGGGGCAGGGGCAGTTCGGGA 656
consensus_4940#0 CCCGACCGCCCCCTCGCCCCCGCCGTCCTCTCCCGCCTCAAGCAGTTCTCCGCCATGAAC 1200
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 CGACGTACCTGTGCACGCAGGTGTCGACGGGGGCGGAGTACGCGTGCAAGTCGATCGCGA 716
consensus_4940#0 AGGCTCAAGAAGATGGCGCTGCGTGTCATCGCCCGGAACCTCTCCGAGGAGGAGCTCGCT 1260
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 AGAGGAAGCTGCTGAGCCCGGAGGACGTGGAGGACGTGCGGCGGGAGATACAGATAATGC 776
consensus_4940#0 GGCCTCAAGGAGATGTTCAAGGCCATGGACACCGACGCCAGCGGCGCCATCACCTTCGAC 1320
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ACCACCTGGCGGGGCACGGGAGCGTGGTGACCATCCAGGGCGCGTACGAGGACAACCTGT 836
consensus_4940#0 GAGCTCAAGGAAGGACTCCGCAGATACGGCTCCAACCTCAGGGAGGCTGAGATCAGGGAT 1380
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 ACGTGCACATCGTGATGGAGCTGTGCGAGGGCGGGGAGCTGTTCGACCGCATCGTGGAGC 896
consensus_4940#0 CTCATGGACGCCGCCGACGTTGACAAAGCGGCACCATCGACTACGACGAGTTCATCGCCG 1440
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 GCGGCTACTTCTCGGAGCGCAAGGCCGCGGAGATCACGCGCGTCATCGTCGGGGTGGTGG 956
consensus_4940#0 CCACCGTCCACCTCAACAAGCTGGAGCGCGAGGAGCACCTGCTCGCCGCCTTCGCCTACT 1500
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 AGGCGTGCCACTCCCTGGGCGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCA 1016
consensus_4940#0 TCGACCGCGACGGCAGCGGCTACATCACCGTCGACGAGCTCGAGCACGCCTGCAGGGACC 1560
consensus_4940#2 ------------------------------------------------------------
consensus_4940#1 AGGAATCCTCCTCCTCCTCGCTCAAGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGC 1076
consensus_4940#0 ACAACATGGCCGACGTTGGCATCGACGACATCATCCGCGAAGTCGACCAAGACAACGACG 1620
consensus_4940#2 -------------------------------------------------AGAGGGCGA-- 9
consensus_4940#1 CCGGGCAGGTGTTCAGCGACGTGGTGGGGAGCCCCTACTACGTGGCGCCGGAGGTGCTGT 1136
**
consensus_4940#0 GCCGCATCGACTACGGCGAGTTCGTCGCAATGATGAAGAAGGGCGCTATCGATATCATCG 1680
consensus_4940#2 GCCAAGGGGACTACGGCGAGTTCGTCGCAATGATGAAGAAGGGCGCTATCGATATCATCG 69
consensus_4940#1 GCAAGCACTACGGCCCCGAGGCGGACGTGTGGACGGCGGGCGTCATCGTCTACATCCTCC 1196
** ** * **** * ** ** * * * * ** * *** **
consensus_4940#0 GCAACGGAAGGCTCACCAT-TGGAAGGCCAACTAC--GGCTACTTCCGACGATCCTTCTC 1737
consensus_4940#2 GCAACGGAAGGCTCACCAT-TGGAAGGCCAACTAC--GGCTACTTCCGACGATCCTTCTC 126
consensus_4940#1 TCAGCGGGGTGCCCCCCTTCTGGGCGGAGACGCAGCAGGGCATCTTCGACG-CCGTCCTC 1255
** *** ** * ** * *** ** * * ** * * ***** * * ***
consensus_4940#0 CAACAATCTCTT--CTTC--CTCTAG---ATGATGCATCAACGCCAAACAAACAAACAAT 1790
consensus_4940#2 CAACAATCTCTT--CTTC--CTCTAG---ATGATGCATCAACGCCAAACAAACAAACAAT 179
consensus_4940#1 CGGGGATCCCTCGACTTCGACTCCGACCCATGGCCCACCATCTCCGACAGCGCCAAGGAC 1315
* *** ** **** *** *** ** ** * ** * * ** *
consensus_4940#0 GCAA------ATATGGTTCCCAATTACTTCAATTCACAACTC-CGACTCACGGATCGCTC 1843
consensus_4940#2 GCAA------ATATGGTTCCCAATTACTTCAATTCACAACTC-CGACTCACGGATCGCTC 232
consensus_4940#1 CTCATCCGCCGCATGCTCCGCTCCCCGCCCAGGGAACGCCTCACCGCCCACCAGGTGCTT 1375
* *** * * * ** ** *** * * *** ***
consensus_4940#0 GCATGGCATGCTAGCTAGTAGCATATACTCTATACTCTCAAGATTCATCATTCTTTTTAT 1903
consensus_4940#2 GCATGGCATGCTAGCTAGTAGCATATACTCTATACTCTCAAGATTCATCATTCTTTTTAT 292
consensus_4940#1 -TGCCACCCCTGGGTCTGCGACGACGGCGTCGCCCCCGACCGCCCCCTCGCCCCCGCCGT 1434
* * * * * * * * * ** * *
consensus_4940#0 ACCAT---GCATACAGCTGATTATTTCTTGGGATAGAATAAAATTAAGGGCATATACCTC 1960
consensus_4940#2 ACCAT---GCATACAGCTGATTATTTCTTGGGATAGAATAAAATTAAGGGCATATACCTC 349
consensus_4940#1 CCTCTCCCGCCTCAAGCAGTTCTCCGCCATGAACAGGCTCAAGAAGATGGCGCTGCGTGT 1494
* * ** * *** * * * * * ** * ** * ***
consensus_4940#0 CAGAGATCG--ATCAATCTATGCATGTATATGGTTTTGTTGCGGATACATGCATGCCAAC 2018
consensus_4940#2 CAGAGATCG--ATCAATCTATGCATGTATATGGTTTTGTTGCGGATACATGCATGCCAAC 407
consensus_4940#1 CATCGCCCGGAACCTCTCCGAGGAGGAGCTCGCTGGCCTCAAGGAGATGTTCAAGGCCAT 1554
** * ** * * ** * * * * * * *** * * ** * * *
consensus_4940#0 GGAAGCAATTTGTATATGTG--GGTACCT-----GATCCAAGAGAGTGCATATAAAGCAA 2071
consensus_4940#2 GGAAGCAATTTGTATATGTG--GGTACCT-----GATCCAAGAGAGTGCATATAAAGCAA 460
consensus_4940#1 GGACACCGACGCCAGCGGCGCCATCACCTTCGACGAGCTCAAGGAAGGACTCCGCAGATA 1614
*** * * * * **** ** * * ** * * ** *
consensus_4940#0 TT---------------------------------------------------------- 2073
consensus_4940#2 TTTTTCCTGTGTAAAAAAAAAAAAAAA--------------------------------- 487
consensus_4940#1 CGGCTCCAACCTCAGGGAGGCTGAGATCAGGGATCTCATGGACGCCGTAAGACCGTCCTC 1674
consensus_4940#0 --------------------------
consensus_4940#2 --------------------------
consensus_4940#1 ACTTCTCTCAATCTCTCAATCTTCTT 1700
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||