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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4959 cluster # 4959       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4959#0 length = 827 sequences # 3  

consensusID : consensus_4959#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 827
fasta sequence
                              [ACCGCTAGTTGAGTCTGACAAAGAAGCCGATGAGCGCCATTACTTGCTCTGGCGGATAGAGAATGGAGTTGCAGAAGGCTCAACTGAGATCCCGAAAGGTGAAGCAATTCCGCTTGAGTACAATTTTGCTGGCTTGAATGCAATTTCATTTGAGAAGGGCTGCTATATCGGACAGGAACTTATTGCACGTACACACCATCGTGGTGTCATTAGGAAACGCCTAATGCCATTAATATTTGAAGATGAAAATGGGCAAGAACTCAAGCAGGCTGTTGCTCCAGGCTCAGAAGTCGTGGACAAGGAGTCTGGCAAGAAAATCGGTACAGTTAACACTGCTCTTGGCAGCCGTGGTATGGGCCTGCTGAGACTTGAAGAAGCCCTGAAGCAAAATTCAAGCCTTGCCATCAAGGATAATAGGGATGTGAGAGTTAA-GGCGATCAAACCAGACTGGTGGCCGGTTGAGTGGACACAGATGCTTGAGCAGCAAAGTGCTGTTGCTTGACATCATAAGTTCAGAATGTTCAGTTCCTCACTTGAAATATCCAGTGAAGTTTTGGAGAGTTTAAAGCCGAAAACTAATACAGGATTCCGTTACGGACCTTTCAGAATTCAGAGGCAATCAGAGCAATTTCAGTTTAGCAGCTTTTGCTTATGTTCTCAGTTTAACAATTGACACAGTTACTTGATCATGTTGTCTGATGTATGAAGGCAGAGACTGTTTTGTTTTCTCTGTCCTCTCCACTTGTATCGACCATAAATAAGTGACTGTACATGACCAAACCCTGAAACACTCATTTCAATAAATTACT-CTTGTCAACAAAAAAAAA]

[+] EMBL AK063692             [ACCGCTAGTTGAGTCTGACAAAGAAGCCGATGAGCGCCATTACTTGCTCTGGCGGATAGAGAATGGAGTTGCAGAAGGCTCAACTGAGATCCCGAAAGGTGAAGCAATTCCGCTTGAGTACAATTTTGCTGGCTTGAATGCAATTTCATTTGAGAAGGGCTGCTATATCGGACAGGAACTTATTGCACGTACACACCATCGTGGTGTCATTAGGAAACGCCTAATGCCATTAATATTTGAAGATGAAAATGGGCAAGAACTCAAGCAGGCTGTTGCTCCAGGCTCAGAAGTCGTGGACAAGGAGTCTGGCAAGAAAATCGGTACAGTTAACACTGCTCTTGGCAGCCGTGGTATGGGCCTGCTGAGACTTGAAGAAGCCCTGAAGCAAAATTCAAGCCTTGCCATCAAGGATAATAGGGATGTGAGAGTTAA GGCGATCAAACCAGACTGGTGGCCGGTTGAGTGGACACAGATGCTTGAGCAGCAAAGTGCTGTTGCTTGACATCATAAGTTCAGAATGTTCAGTTCCTCACTTGAAATATCCAGTGAAGTTTTGGAGAGTTTAAAGCCGAAAACTAATACAGGATTCCGTTACGGACCTTTCAGAATTCAGAGGCAATCAGAGCAATTTCAGTTTAGCAGCTTTTGCTTATGTTCTCAGTTTAACAATTGACACAGTTACTTGATCATGTTGTCTGATGTATGAAGGCAGAGACTGTTTTGTTTTCTCTGTCCTCTCCACTTGTATCGACCATAAATAAGTGACTGTACATGACCAAACCCTGAAACACTCATTTCAATAAATTACT CTTGTC            ]
[+] EMBL AU222552             [                                                                                                                                                                                                                                                                                                                                                                                                                 CCATCAAGGATAATAGGGATGTGAGAGTTAA GGCGATCAAACCAGACTGGTGGCCGGTTGAGTGGACACAGATGCTTGAGCAGCAAAGTGCTGTTGCTTGACATCATAAGTTCAGAATGTTCAGTTCCTCACTTGAAATATCCAGTGAAGTTTTGGAGAGTTTAAAGCCGAAAACTAATACAGGATTCCGTTACGGACCTTTCAGAATTCAGAGGCAATCAGAGCAATTTCAGTTTAGCAGCTTTTGCTTATGTTCTCAGTTTAACAATTGACACAGTTACTTGATCATGTTGTCTGATGTATGAAGGCAGAGACTGTTTTGTTTTCTCTGTCCTCTCCACTTGTATCGACCATAAATAAGTGACTGTACATGACCAAACCCTGAAACACTCATTTCAATAAATTACTCCTTGTCAACAAAAAAAAA]
[+] EMBL AU166340             [                                                                                                                                                                                                                                                                                                                                                                                                                     CAAGGATAATAGGGATGTGAGAGTTAAGGGCGATCAAACCAGACTGGTGGCCGGTTGAGTGGACACAGATGCTTGAGCAGCAAAGTGCTGTTGCTTGACATCATAAGTTCAGAATGTTCAGTTCCTCACTTGAAATATCCAGTGAAGTTTTGGAGAGTTTAAAGCCGAAAACTAATACAGGATTCCGTTACGGACCTTTCAGAATTCAGAGGCAATCAGAGCAATTTCAGTTTAGCAGCTTTTGCTTATGTTCTCAGTTTAACAATTGACACAGTTACTTGATCATGTTGTCTGATGTATGAAGGCAGAGACTGTTTTGTTTTCTCTGTCCTCTCCACTTGTATCGACCATAAATAAGTGACTGTACATGACCAAACCCTGAAACACTCATTTCAATAAATTACT CTTGTCAACAAAAAAAAA]


>consensus_4959#0 ACCGCTAGTTGAGTCTGACAAAGAAGCCGATGAGCGCCATTACTTGCTCTGGCGGATAGA GAATGGAGTTGCAGAAGGCTCAACTGAGATCCCGAAAGGTGAAGCAATTCCGCTTGAGTA CAATTTTGCTGGCTTGAATGCAATTTCATTTGAGAAGGGCTGCTATATCGGACAGGAACT TATTGCACGTACACACCATCGTGGTGTCATTAGGAAACGCCTAATGCCATTAATATTTGA AGATGAAAATGGGCAAGAACTCAAGCAGGCTGTTGCTCCAGGCTCAGAAGTCGTGGACAA GGAGTCTGGCAAGAAAATCGGTACAGTTAACACTGCTCTTGGCAGCCGTGGTATGGGCCT GCTGAGACTTGAAGAAGCCCTGAAGCAAAATTCAAGCCTTGCCATCAAGGATAATAGGGA TGTGAGAGTTAAGGCGATCAAACCAGACTGGTGGCCGGTTGAGTGGACACAGATGCTTGA GCAGCAAAGTGCTGTTGCTTGACATCATAAGTTCAGAATGTTCAGTTCCTCACTTGAAAT ATCCAGTGAAGTTTTGGAGAGTTTAAAGCCGAAAACTAATACAGGATTCCGTTACGGACC TTTCAGAATTCAGAGGCAATCAGAGCAATTTCAGTTTAGCAGCTTTTGCTTATGTTCTCA GTTTAACAATTGACACAGTTACTTGATCATGTTGTCTGATGTATGAAGGCAGAGACTGTT TTGTTTTCTCTGTCCTCTCCACTTGTATCGACCATAAATAAGTGACTGTACATGACCAAA CCCTGAAACACTCATTTCAATAAATTACTCTTGTCAACAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)