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Oryza sativa
cluster # 4962 cluster # 4962       Sequences # 3       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4962#0 length = 1888 sequences # 1  
 consensus_4962#1 length = 1466 sequences # 1  
consensus_4962#2 length = 476 sequences # 1  
consensusID : consensus_4962#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1888
fasta sequence 
                              [AGGGGCCACGCGCTCGCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGAGGTCAGCGACATCGACGCCGTGCTCCAGCGCGCCGCAGAGGAATACCTCCTCCTCGGTGGTGGTGGCGGCGACGGTGCCGGCGACGTCGCCCTCTCCGCCTCGCTCGGCTCCGGGCTTATCGATCTGGATGGGACGGTGGAGACGGAGGAGGAGAGGCGGTGGCTGCGGGAGGAGCAGGAGGCCCTTCACGCGGGCAGCCTCAAGGTGCCCCGCCGACCGCCATGGACTCCCCAGATGACGGTGGAGGAGCTCGACGCCAACGAGAAGCGGGCCTTCCTGGAGTGGCGGAGGAACCTCGCAAGATTGGAAGAGAACGAAAAACTTGTCCTTACCCCTTTTGAGAAGAACATTGATATCTGGAGACAGCTCTGGAGAGTACTTGAACGCAGTGATCTGCTGGTCATGGTAGTTGATGCTCGAGATCCCTTGTTCTACCGCTGCCCTGATCTTGAGGTATACGCACAGGAAATTGATGAGCACAAGAGAACACTGCTTCTTGTAAACAAGGCTGATCTTTTACCACTGAATGTCAGACAGAGATGGGCAGAATACTTTAAGCAACACGATATCCTTTATCTGTTCTGGTCTGCCAAAGCTGCTACTGCTGATTTAGAGGGAAAGAAGTTGAGCAGCTATTCCATGGAAAACTGGAATACAGCAGATCTTGACACCAAGATATATGGCCGGGATGAACTCTTGGTGAGATTGCAGGGTGAAGCTGAGTATATTGTGAACCAAAAGGGAGCATTAAGAGCTGAAGAGGGTCATGAATCTAGTCGTTCAGATTCTGTCTCAACACGACCCAAGCATGTGGTTGTTGGATTTGTAGGCTATCCAAATGTTGGGAAGAGTTCAACCATCAATGCTTTGGTAGGCCAGAAGAGAACTGGTGTAACCTCTACACCTGGCAAGACCAAGCATTTTCAGACATTGGTAATCTCAGAAGAACTCATTCTCTGTGATTGTCCAGGTCTGGTCTTCCCTTCCTTTTCAAGCTCAAGGCATGAGATGGTAGCCTGTGGTGTCTTGCCAATTGATAGGATGACAAAGCATAGGGGCGCTATTCAAGTGGTGGCAAATCGTGTGCCAAGAAATGTTCTAGAACAGATTTATAAAATCACCCTGCCAAAGCCCAAGGCATATGAACAACTGTCCCGACCACCAACTGCCGCTGAGTTGCTGCGGGCGTACTGCACATCTCGAGGGCATGTCAGTCATGCTGGGCTGCCTGATGAGACTAGGGCTGCTAGACAGATTCTGAAGGATTACTTAGATGGAAAGATCCCACACTTTGAGCTTCCCCCTGGTGATACAGATTCTGAAACTGACCCAGAGGAAACCACTGACCTTGAAGGCTCAGATACTGCAGTAGGTGCCACAGCAGATCATTGTGCTTCTGATGAACAAGATGGGGAAATCAGTCAAGCTGATCCAAACATTAGTCATGTACTAAGTGACCTTGAATCTTTCGACCTGGCCAGTGAAGTGTCCAAGAACTCTACAAAGAAGAAGAAAGAGGCATCCTATAAGCATCACAAGAAACCCCAGAGGAAGAAGGATCGTTCATGGAGGGTTGGAAATGATGGCGCTGATGGATCTGCTGTTGTTCGGGTGTTCCAGAAACCTGCCGTCAATTTTGCTACCGTTACAGGTTAATGTTTTTTTGCGGCACTCTGTGCGACTTCATTCTCTTTTTTAGCTTACGGTAATTGAAGATGTCGTTGAAAGTCAAACTACATTTTATCCATTTTGTTTCATCTTCTGCTGTTTGTTATGGCCATCTGTAATTCTGTATTGGAAATTTGGAATGGTACGCAATGTGGCTATT]

[+] EMBL AK103649             [AGGGGCCACGCGCTCGCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGAGGTCAGCGACATCGACGCCGTGCTCCAGCGCGCCGCAGAGGAATACCTCCTCCTCGGTGGTGGTGGCGGCGACGGTGCCGGCGACGTCGCCCTCTCCGCCTCGCTCGGCTCCGGGCTTATCGATCTGGATGGGACGGTGGAGACGGAGGAGGAGAGGCGGTGGCTGCGGGAGGAGCAGGAGGCCCTTCACGCGGGCAGCCTCAAGGTGCCCCGCCGACCGCCATGGACTCCCCAGATGACGGTGGAGGAGCTCGACGCCAACGAGAAGCGGGCCTTCCTGGAGTGGCGGAGGAACCTCGCAAGATTGGAAGAGAACGAAAAACTTGTCCTTACCCCTTTTGAGAAGAACATTGATATCTGGAGACAGCTCTGGAGAGTACTTGAACGCAGTGATCTGCTGGTCATGGTAGTTGATGCTCGAGATCCCTTGTTCTACCGCTGCCCTGATCTTGAGGTATACGCACAGGAAATTGATGAGCACAAGAGAACACTGCTTCTTGTAAACAAGGCTGATCTTTTACCACTGAATGTCAGACAGAGATGGGCAGAATACTTTAAGCAACACGATATCCTTTATCTGTTCTGGTCTGCCAAAGCTGCTACTGCTGATTTAGAGGGAAAGAAGTTGAGCAGCTATTCCATGGAAAACTGGAATACAGCAGATCTTGACACCAAGATATATGGCCGGGATGAACTCTTGGTGAGATTGCAGGGTGAAGCTGAGTATATTGTGAACCAAAAGGGAGCATTAAGAGCTGAAGAGGGTCATGAATCTAGTCGTTCAGATTCTGTCTCAACACGACCCAAGCATGTGGTTGTTGGATTTGTAGGCTATCCAAATGTTGGGAAGAGTTCAACCATCAATGCTTTGGTAGGCCAGAAGAGAACTGGTGTAACCTCTACACCTGGCAAGACCAAGCATTTTCAGACATTGGTAATCTCAGAAGAACTCATTCTCTGTGATTGTCCAGGTCTGGTCTTCCCTTCCTTTTCAAGCTCAAGGCATGAGATGGTAGCCTGTGGTGTCTTGCCAATTGATAGGATGACAAAGCATAGGGGCGCTATTCAAGTGGTGGCAAATCGTGTGCCAAGAAATGTTCTAGAACAGATTTATAAAATCACCCTGCCAAAGCCCAAGGCATATGAACAACTGTCCCGACCACCAACTGCCGCTGAGTTGCTGCGGGCGTACTGCACATCTCGAGGGCATGTCAGTCATGCTGGGCTGCCTGATGAGACTAGGGCTGCTAGACAGATTCTGAAGGATTACTTAGATGGAAAGATCCCACACTTTGAGCTTCCCCCTGGTGATACAGATTCTGAAACTGACCCAGAGGAAACCACTGACCTTGAAGGCTCAGATACTGCAGTAGGTGCCACAGCAGATCATTGTGCTTCTGATGAACAAGATGGGGAAATCAGTCAAGCTGATCCAAACATTAGTCATGTACTAAGTGACCTTGAATCTTTCGACCTGGCCAGTGAAGTGTCCAAGAACTCTACAAAGAAGAAGAAAGAGGCATCCTATAAGCATCACAAGAAACCCCAGAGGAAGAAGGATCGTTCATGGAGGGTTGGAAATGATGGCGCTGATGGATCTGCTGTTGTTCGGGTGTTCCAGAAACCTGCCGTCAATTTTGCTACCGTTACAGGTTAATGTTTTTTTGCGGCACTCTGTGCGACTTCATTCTCTTTTTTAGCTTACGGTAATTGAAGATGTCGTTGAAAGTCAAACTACATTTTATCCATTTTGTTTCATCTTCTGCTGTTTGTTATGGCCATCTGTAATTCTGTATTGGAAATTTGGAATGGTACGCAATGTGGCTATT]




>consensus_4962#0
AGGGGCCACGCGCTCGCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGAG
GTCAGCGACATCGACGCCGTGCTCCAGCGCGCCGCAGAGGAATACCTCCTCCTCGGTGGT
GGTGGCGGCGACGGTGCCGGCGACGTCGCCCTCTCCGCCTCGCTCGGCTCCGGGCTTATC
GATCTGGATGGGACGGTGGAGACGGAGGAGGAGAGGCGGTGGCTGCGGGAGGAGCAGGAG
GCCCTTCACGCGGGCAGCCTCAAGGTGCCCCGCCGACCGCCATGGACTCCCCAGATGACG
GTGGAGGAGCTCGACGCCAACGAGAAGCGGGCCTTCCTGGAGTGGCGGAGGAACCTCGCA
AGATTGGAAGAGAACGAAAAACTTGTCCTTACCCCTTTTGAGAAGAACATTGATATCTGG
AGACAGCTCTGGAGAGTACTTGAACGCAGTGATCTGCTGGTCATGGTAGTTGATGCTCGA
GATCCCTTGTTCTACCGCTGCCCTGATCTTGAGGTATACGCACAGGAAATTGATGAGCAC
AAGAGAACACTGCTTCTTGTAAACAAGGCTGATCTTTTACCACTGAATGTCAGACAGAGA
TGGGCAGAATACTTTAAGCAACACGATATCCTTTATCTGTTCTGGTCTGCCAAAGCTGCT
ACTGCTGATTTAGAGGGAAAGAAGTTGAGCAGCTATTCCATGGAAAACTGGAATACAGCA
GATCTTGACACCAAGATATATGGCCGGGATGAACTCTTGGTGAGATTGCAGGGTGAAGCT
GAGTATATTGTGAACCAAAAGGGAGCATTAAGAGCTGAAGAGGGTCATGAATCTAGTCGT
TCAGATTCTGTCTCAACACGACCCAAGCATGTGGTTGTTGGATTTGTAGGCTATCCAAAT
GTTGGGAAGAGTTCAACCATCAATGCTTTGGTAGGCCAGAAGAGAACTGGTGTAACCTCT
ACACCTGGCAAGACCAAGCATTTTCAGACATTGGTAATCTCAGAAGAACTCATTCTCTGT
GATTGTCCAGGTCTGGTCTTCCCTTCCTTTTCAAGCTCAAGGCATGAGATGGTAGCCTGT
GGTGTCTTGCCAATTGATAGGATGACAAAGCATAGGGGCGCTATTCAAGTGGTGGCAAAT
CGTGTGCCAAGAAATGTTCTAGAACAGATTTATAAAATCACCCTGCCAAAGCCCAAGGCA
TATGAACAACTGTCCCGACCACCAACTGCCGCTGAGTTGCTGCGGGCGTACTGCACATCT
CGAGGGCATGTCAGTCATGCTGGGCTGCCTGATGAGACTAGGGCTGCTAGACAGATTCTG
AAGGATTACTTAGATGGAAAGATCCCACACTTTGAGCTTCCCCCTGGTGATACAGATTCT
GAAACTGACCCAGAGGAAACCACTGACCTTGAAGGCTCAGATACTGCAGTAGGTGCCACA
GCAGATCATTGTGCTTCTGATGAACAAGATGGGGAAATCAGTCAAGCTGATCCAAACATT
AGTCATGTACTAAGTGACCTTGAATCTTTCGACCTGGCCAGTGAAGTGTCCAAGAACTCT
ACAAAGAAGAAGAAAGAGGCATCCTATAAGCATCACAAGAAACCCCAGAGGAAGAAGGAT
CGTTCATGGAGGGTTGGAAATGATGGCGCTGATGGATCTGCTGTTGTTCGGGTGTTCCAG
AAACCTGCCGTCAATTTTGCTACCGTTACAGGTTAATGTTTTTTTGCGGCACTCTGTGCG
ACTTCATTCTCTTTTTTAGCTTACGGTAATTGAAGATGTCGTTGAAAGTCAAACTACATT
TTATCCATTTTGTTTCATCTTCTGCTGTTTGTTATGGCCATCTGTAATTCTGTATTGGAA
ATTTGGAATGGTACGCAATGTGGCTATT

consensusID : consensus_4962#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1466
fasta sequence 
                              [CCACGCCGTGCAGGTGGAGATGGGAGGCGGCGGCGGCGGCGGCGGGAGGAAGGACCGCGGCGAGGGGCTCGGCCGCGCGCTGACCCGGCAGCGGAACAAGGCCGCGGCGGCGGCCAAGGAGAGGGGCCACGCGCTCGCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGAGGTCAGCGACATCGACGCCGTGCTCCAGCGCGCCGCAGAGGAATACCTCCTCCTCGGTGGTGGTGGCGGCGACGGTGCCGGCGACGTCGCCCTCTCCGCCTCGCTCGGCTCCGGGCTTATCGATCTGGATGGGACGGTGGAGACGGAGGAGGAGAGGCGGTGGCTGCGGGAGGAGCAGGAGGCCCTTCACGCGGGCAGCCTCAAGGTGCCCCGCCGACCGCCATGGACTCCCCAGATGACGGTGGAGGAGCTCGACGCCAACGAGAAGCGGGCCTTCCTGGAGTGGCGGAGGAACCTCGCAAGATTGGAAGAGAACGAAAAACTTGTCCTTACCCCTTTTGAGAAGAACATTGATATCTGGAGACAGCTCTGGAGAGTACTTGAACGCAGTGATCTGCTGGTCATGGTAGTTGATGCTCGAGATCCCTTGTTCTACCGCTGCCCTGATCTTGAGGTATACGCACAGGAAATTGATGAGCACAAGAGAACACTGCTTCTTGTAAACAAGGCTGATCTTTTACCACTGAATGTCAGACAGAGATGGGCAGAATACTTTAAGCAACACGATATCCTTTATCTGTTCTGGTCTGCCAAAGCTGCTACTGCTGATTTAGAGGGAAAGAAGTTGAGCAGCTACTCCATGGAAAACTGGAATACAGCAGATCTTGACACCAAGATATATGGCCGGGATGAACTCCTGGTGATACAGATTCTGAAACTGACCCAGAGGAAACCACTGACCTTGAAGGCTCAGATACTGCAGTAGGTGCCACAGCAGATCATTGTGCTTCTGATGAACAAGATGAGGAAATCAGTCAAGCTGATCCAAACATTAGTCATGTACTAAGTGACCTTGAATCTTTCGACCTGGCCAGTGAAGTGTCCAAGAACTCTACAAAGAAGAAGAAAGAGGCATCCTATAAGCATCACAAGAAACCCCAGAGGAAGAAGGATCGTTCATGGAGGGTTGGAATTGATGGCGCTGATGGATCTGCTGTTGTTCGGGTGTTCCAGAAACCTGCCGTCAATTTTGCTACCGTTACAGGTTAATGTTTTTTTGCGGCACTCTGTGCGACTTCATTCTCTTTTTTAGCTTACGGTAATTGAAGATGTCGTTGAAAGTCAAACTACATTTTATCCATTTTGTTTCATCTTCTGCTGTTTGTTATGGCCATCTGTAATTCTGTATTGGAAATTTGGAATGGTACGCAATGTGGCTATTTTTCGATGCTAGCTTTCATAGCATTTGACTGAAAGGATGAAACCTTATGAATGTTCCATTAGGT]

[+] EMBL AK064308             [CCACGCCGTGCAGGTGGAGATGGGAGGCGGCGGCGGCGGCGGCGGGAGGAAGGACCGCGGCGAGGGGCTCGGCCGCGCGCTGACCCGGCAGCGGAACAAGGCCGCGGCGGCGGCCAAGGAGAGGGGCCACGCGCTCGCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGAGGTCAGCGACATCGACGCCGTGCTCCAGCGCGCCGCAGAGGAATACCTCCTCCTCGGTGGTGGTGGCGGCGACGGTGCCGGCGACGTCGCCCTCTCCGCCTCGCTCGGCTCCGGGCTTATCGATCTGGATGGGACGGTGGAGACGGAGGAGGAGAGGCGGTGGCTGCGGGAGGAGCAGGAGGCCCTTCACGCGGGCAGCCTCAAGGTGCCCCGCCGACCGCCATGGACTCCCCAGATGACGGTGGAGGAGCTCGACGCCAACGAGAAGCGGGCCTTCCTGGAGTGGCGGAGGAACCTCGCAAGATTGGAAGAGAACGAAAAACTTGTCCTTACCCCTTTTGAGAAGAACATTGATATCTGGAGACAGCTCTGGAGAGTACTTGAACGCAGTGATCTGCTGGTCATGGTAGTTGATGCTCGAGATCCCTTGTTCTACCGCTGCCCTGATCTTGAGGTATACGCACAGGAAATTGATGAGCACAAGAGAACACTGCTTCTTGTAAACAAGGCTGATCTTTTACCACTGAATGTCAGACAGAGATGGGCAGAATACTTTAAGCAACACGATATCCTTTATCTGTTCTGGTCTGCCAAAGCTGCTACTGCTGATTTAGAGGGAAAGAAGTTGAGCAGCTACTCCATGGAAAACTGGAATACAGCAGATCTTGACACCAAGATATATGGCCGGGATGAACTCCTGGTGATACAGATTCTGAAACTGACCCAGAGGAAACCACTGACCTTGAAGGCTCAGATACTGCAGTAGGTGCCACAGCAGATCATTGTGCTTCTGATGAACAAGATGAGGAAATCAGTCAAGCTGATCCAAACATTAGTCATGTACTAAGTGACCTTGAATCTTTCGACCTGGCCAGTGAAGTGTCCAAGAACTCTACAAAGAAGAAGAAAGAGGCATCCTATAAGCATCACAAGAAACCCCAGAGGAAGAAGGATCGTTCATGGAGGGTTGGAATTGATGGCGCTGATGGATCTGCTGTTGTTCGGGTGTTCCAGAAACCTGCCGTCAATTTTGCTACCGTTACAGGTTAATGTTTTTTTGCGGCACTCTGTGCGACTTCATTCTCTTTTTTAGCTTACGGTAATTGAAGATGTCGTTGAAAGTCAAACTACATTTTATCCATTTTGTTTCATCTTCTGCTGTTTGTTATGGCCATCTGTAATTCTGTATTGGAAATTTGGAATGGTACGCAATGTGGCTATTTTTCGATGCTAGCTTTCATAGCATTTGACTGAAAGGATGAAACCTTATGAATGTTCCATTAGGT]




>consensus_4962#1
CCACGCCGTGCAGGTGGAGATGGGAGGCGGCGGCGGCGGCGGCGGGAGGAAGGACCGCGG
CGAGGGGCTCGGCCGCGCGCTGACCCGGCAGCGGAACAAGGCCGCGGCGGCGGCCAAGGA
GAGGGGCCACGCGCTCGCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGA
GGTCAGCGACATCGACGCCGTGCTCCAGCGCGCCGCAGAGGAATACCTCCTCCTCGGTGG
TGGTGGCGGCGACGGTGCCGGCGACGTCGCCCTCTCCGCCTCGCTCGGCTCCGGGCTTAT
CGATCTGGATGGGACGGTGGAGACGGAGGAGGAGAGGCGGTGGCTGCGGGAGGAGCAGGA
GGCCCTTCACGCGGGCAGCCTCAAGGTGCCCCGCCGACCGCCATGGACTCCCCAGATGAC
GGTGGAGGAGCTCGACGCCAACGAGAAGCGGGCCTTCCTGGAGTGGCGGAGGAACCTCGC
AAGATTGGAAGAGAACGAAAAACTTGTCCTTACCCCTTTTGAGAAGAACATTGATATCTG
GAGACAGCTCTGGAGAGTACTTGAACGCAGTGATCTGCTGGTCATGGTAGTTGATGCTCG
AGATCCCTTGTTCTACCGCTGCCCTGATCTTGAGGTATACGCACAGGAAATTGATGAGCA
CAAGAGAACACTGCTTCTTGTAAACAAGGCTGATCTTTTACCACTGAATGTCAGACAGAG
ATGGGCAGAATACTTTAAGCAACACGATATCCTTTATCTGTTCTGGTCTGCCAAAGCTGC
TACTGCTGATTTAGAGGGAAAGAAGTTGAGCAGCTACTCCATGGAAAACTGGAATACAGC
AGATCTTGACACCAAGATATATGGCCGGGATGAACTCCTGGTGATACAGATTCTGAAACT
GACCCAGAGGAAACCACTGACCTTGAAGGCTCAGATACTGCAGTAGGTGCCACAGCAGAT
CATTGTGCTTCTGATGAACAAGATGAGGAAATCAGTCAAGCTGATCCAAACATTAGTCAT
GTACTAAGTGACCTTGAATCTTTCGACCTGGCCAGTGAAGTGTCCAAGAACTCTACAAAG
AAGAAGAAAGAGGCATCCTATAAGCATCACAAGAAACCCCAGAGGAAGAAGGATCGTTCA
TGGAGGGTTGGAATTGATGGCGCTGATGGATCTGCTGTTGTTCGGGTGTTCCAGAAACCT
GCCGTCAATTTTGCTACCGTTACAGGTTAATGTTTTTTTGCGGCACTCTGTGCGACTTCA
TTCTCTTTTTTAGCTTACGGTAATTGAAGATGTCGTTGAAAGTCAAACTACATTTTATCC
ATTTTGTTTCATCTTCTGCTGTTTGTTATGGCCATCTGTAATTCTGTATTGGAAATTTGG
AATGGTACGCAATGTGGCTATTTTTCGATGCTAGCTTTCATAGCATTTGACTGAAAGGAT
GAAACCTTATGAATGTTCCATTAGGT

consensusID : consensus_4962#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 476
fasta sequence 
                              [GGTTCCCCCGGGCTGCTTGATTTTCGGCTCATGGCCGCTGTCATGGGCTCGGCCGCGCGCTGACCCGGCATCGGAACTTTGCCTCTGCTGCGGCCTTGGATAGGGGCCTCTCGCTCTCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGAGGTCAGCGACATCGACGCCGTGCTCCAGCTGCGCCGCATAGGAAGACCTCCTCCTCTGGTGGTGGTGGCGGCGACGGTGCCGGCGTACGTCGCCCTCTCCGCCTCTGCTCCGGCTCCGGGCTCATTCGATTCTGGATGGGACGGTGGAGACGCGAGGAGCGACGAGGCTGGTTGGCTGCCGGGATGGAGCTTTGACGGCCCCTTCTCGCTTGGCAGCCCTCTGTGTCGCCCCGCCCGGACCGCCCATGGACTCCCCCCTGATCGACTGGTCGGAGGAGCTCCTACCGCCTACCGATAAGCGGGGCCTTCCTTGTAG]

[+] EMBL CA753341             [GGTTCCCCCGGGCTGCTTGATTTTCGGCTCATGGCCGCTGTCATGGGCTCGGCCGCGCGCTGACCCGGCATCGGAACTTTGCCTCTGCTGCGGCCTTGGATAGGGGCCTCTCGCTCTCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGAGGTCAGCGACATCGACGCCGTGCTCCAGCTGCGCCGCATAGGAAGACCTCCTCCTCTGGTGGTGGTGGCGGCGACGGTGCCGGCGTACGTCGCCCTCTCCGCCTCTGCTCCGGCTCCGGGCTCATTCGATTCTGGATGGGACGGTGGAGACGCGAGGAGCGACGAGGCTGGTTGGCTGCCGGGATGGAGCTTTGACGGCCCCTTCTCGCTTGGCAGCCCTCTGTGTCGCCCCGCCCGGACCGCCCATGGACTCCCCCCTGATCGACTGGTCGGAGGAGCTCCTACCGCCTACCGATAAGCGGGGCCTTCCTTGTAG]




>consensus_4962#2
GGTTCCCCCGGGCTGCTTGATTTTCGGCTCATGGCCGCTGTCATGGGCTCGGCCGCGCGC
TGACCCGGCATCGGAACTTTGCCTCTGCTGCGGCCTTGGATAGGGGCCTCTCGCTCTCCC
TCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGAGGTCAGCGACATCGACGCCG
TGCTCCAGCTGCGCCGCATAGGAAGACCTCCTCCTCTGGTGGTGGTGGCGGCGACGGTGC
CGGCGTACGTCGCCCTCTCCGCCTCTGCTCCGGCTCCGGGCTCATTCGATTCTGGATGGG
ACGGTGGAGACGCGAGGAGCGACGAGGCTGGTTGGCTGCCGGGATGGAGCTTTGACGGCC
CCTTCTCGCTTGGCAGCCCTCTGTGTCGCCCCGCCCGGACCGCCCATGGACTCCCCCCTG
ATCGACTGGTCGGAGGAGCTCCTACCGCCTACCGATAAGCGGGGCCTTCCTTGTAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4962#0      ------------------------------------------------------------
consensus_4962#1      CCACGCCGTGCAGGTGGAGATGGGAGGCGGCGGCGGCGGCGGCGGGAGGAAGGACCGCGG 60
consensus_4962#2      --------------------GGTTCCCCCGGGCTGCTTGATTTTCGGCTCATGGCCGCTG 40
                                                                                  

consensus_4962#0      ------------------------------------------------------------
consensus_4962#1      CGAGGGGCTCGGCCGCGCGCTGACCCGGCAGCGGAACAAGGCCGCGGCGGCGGCCAAGGA 120
consensus_4962#2      TCATGGGCTCGGCCGCGCGCTGACCCGGCATCGGAACTTTGCCTCTGCTGCGGCCTTGGA 100
                                                                                  

consensus_4962#0      -AGGGGCCACGCGCTCGCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGA 59
consensus_4962#1      GAGGGGCCACGCGCTCGCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGA 180
consensus_4962#2      TAGGGGCCTCTCGCTCTCCCTCGCCCGCCGCGCGCGCCAGCCGCTCGAGTCCGTCATCGA 160
                       ******* * ***** *******************************************

consensus_4962#0      GGTCAGCGACATCGACGCCGTGCTCCAGC-GCGCCGCAGAGGAATACCTCCTCCTC-GGT 117
consensus_4962#1      GGTCAGCGACATCGACGCCGTGCTCCAGC-GCGCCGCAGAGGAATACCTCCTCCTC-GGT 238
consensus_4962#2      GGTCAGCGACATCGACGCCGTGCTCCAGCTGCGCCGCATAGGAAGACCTCCTCCTCTGGT 220
                      ***************************** ******** ***** *********** ***

consensus_4962#0      GGTGGTGGCGGCGACGGTGCCGGCG-ACGTCGCCCTCTCCGCCTC-GCTC-GGCTCCGGG 174
consensus_4962#1      GGTGGTGGCGGCGACGGTGCCGGCG-ACGTCGCCCTCTCCGCCTC-GCTC-GGCTCCGGG 295
consensus_4962#2      GGTGGTGGCGGCGACGGTGCCGGCGTACGTCGCCCTCTCCGCCTCTGCTCCGGCTCCGGG 280
                      ************************* ******************* **** *********

consensus_4962#0      CTTAT-CGAT-CTGGATGGGACGGTGGAGACG-GAGGAGGA--GAGGCGG--TGGCTGCG 227
consensus_4962#1      CTTAT-CGAT-CTGGATGGGACGGTGGAGACG-GAGGAGGA--GAGGCGG--TGGCTGCG 348
consensus_4962#2      CTCATTCGATTCTGGATGGGACGGTGGAGACGCGAGGAGCGACGAGGCTGGTTGGCTGCC 340
                      ** ** **** ********************* ******    ***** *  ******* 

consensus_4962#0      GGA--GGAGC---AGGAGGCCCTTCACGCG-GGCAGCCTC--AAGGTGCCCCGCC--GAC 277
consensus_4962#1      GGA--GGAGC---AGGAGGCCCTTCACGCG-GGCAGCCTC--AAGGTGCCCCGCC--GAC 398
consensus_4962#2      GGGATGGAGCTTTGACGGCCCCTTCTCGCTTGGCAGCCCTCTGTGTCGCCCCGCCCGGAC 400
                      **   *****       * ****** ***  *******      *  ********  ***

consensus_4962#0      CGCC-ATGGACTCCCC---AGATGACGG--TGGAGGAGCTC--GACGCCAAC-GAGAAGC 328
consensus_4962#1      CGCC-ATGGACTCCCC---AGATGACGG--TGGAGGAGCTC--GACGCCAAC-GAGAAGC 449
consensus_4962#2      CGCCCATGGACTCCCCCCTGATCGACTGGTCGGAGGAGCTCCTACCGCCTACCGATAAGC 460
                      **** ***********       *** *   **********    **** ** ** ****

consensus_4962#0      GGG-CCTTCCTGGAGTGGCGGAGGAACCTCGCAAGATTGGAAGAGAACGAAAAACTTGTC 387
consensus_4962#1      GGG-CCTTCCTGGAGTGGCGGAGGAACCTCGCAAGATTGGAAGAGAACGAAAAACTTGTC 508
consensus_4962#2      GGGGCCTTCCTTGTAG-------------------------------------------- 476
                      *** ******* *                                               

consensus_4962#0      CTTACCCCTTTTGAGAAGAACATTGATATCTGGAGACAGCTCTGGAGAGTACTTGAACGC 447
consensus_4962#1      CTTACCCCTTTTGAGAAGAACATTGATATCTGGAGACAGCTCTGGAGAGTACTTGAACGC 568
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      AGTGATCTGCTGGTCATGGTAGTTGATGCTCGAGATCCCTTGTTCTACCGCTGCCCTGAT 507
consensus_4962#1      AGTGATCTGCTGGTCATGGTAGTTGATGCTCGAGATCCCTTGTTCTACCGCTGCCCTGAT 628
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      CTTGAGGTATACGCACAGGAAATTGATGAGCACAAGAGAACACTGCTTCTTGTAAACAAG 567
consensus_4962#1      CTTGAGGTATACGCACAGGAAATTGATGAGCACAAGAGAACACTGCTTCTTGTAAACAAG 688
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      GCTGATCTTTTACCACTGAATGTCAGACAGAGATGGGCAGAATACTTTAAGCAACACGAT 627
consensus_4962#1      GCTGATCTTTTACCACTGAATGTCAGACAGAGATGGGCAGAATACTTTAAGCAACACGAT 748
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      ATCCTTTATCTGTTCTGGTCTGCCAAAGCTGCTACTGCTGATTTAGAGGGAAAGAAGTTG 687
consensus_4962#1      ATCCTTTATCTGTTCTGGTCTGCCAAAGCTGCTACTGCTGATTTAGAGGGAAAGAAGTTG 808
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      AGCAGCTATTCCATGGAAAACTGGAATACAGCAGATCTTGACACCAAGATATATGGCCGG 747
consensus_4962#1      AGCAGCTACTCCATGGAAAACTGGAATACAGCAGATCTTGACACCAAGATATATGGCCGG 868
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      GATGAACTCTTGGTGAGATTGCAGGGTGAAGCTGAGTATATTGTGAACCAAAAGGGAGCA 807
consensus_4962#1      GATGAACTC--------------------------------------------------- 877
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      TTAAGAGCTGAAGAGGGTCATGAATCTAGTCGTTCAGATTCTGTCTCAACACGACCCAAG 867
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      CATGTGGTTGTTGGATTTGTAGGCTATCCAAATGTTGGGAAGAGTTCAACCATCAATGCT 927
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      TTGGTAGGCCAGAAGAGAACTGGTGTAACCTCTACACCTGGCAAGACCAAGCATTTTCAG 987
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      ACATTGGTAATCTCAGAAGAACTCATTCTCTGTGATTGTCCAGGTCTGGTCTTCCCTTCC 1047
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      TTTTCAAGCTCAAGGCATGAGATGGTAGCCTGTGGTGTCTTGCCAATTGATAGGATGACA 1107
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      AAGCATAGGGGCGCTATTCAAGTGGTGGCAAATCGTGTGCCAAGAAATGTTCTAGAACAG 1167
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      ATTTATAAAATCACCCTGCCAAAGCCCAAGGCATATGAACAACTGTCCCGACCACCAACT 1227
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      GCCGCTGAGTTGCTGCGGGCGTACTGCACATCTCGAGGGCATGTCAGTCATGCTGGGCTG 1287
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      CCTGATGAGACTAGGGCTGCTAGACAGATTCTGAAGGATTACTTAGATGGAAAGATCCCA 1347
consensus_4962#1      ------------------------------------------------------------
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      CACTTTGAGCTTCCCCCTGGTGATACAGATTCTGAAACTGACCCAGAGGAAACCACTGAC 1407
consensus_4962#1      ----------------CTGGTGATACAGATTCTGAAACTGACCCAGAGGAAACCACTGAC 921
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      CTTGAAGGCTCAGATACTGCAGTAGGTGCCACAGCAGATCATTGTGCTTCTGATGAACAA 1467
consensus_4962#1      CTTGAAGGCTCAGATACTGCAGTAGGTGCCACAGCAGATCATTGTGCTTCTGATGAACAA 981
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      GATGGGGAAATCAGTCAAGCTGATCCAAACATTAGTCATGTACTAAGTGACCTTGAATCT 1527
consensus_4962#1      GATGAGGAAATCAGTCAAGCTGATCCAAACATTAGTCATGTACTAAGTGACCTTGAATCT 1041
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      TTCGACCTGGCCAGTGAAGTGTCCAAGAACTCTACAAAGAAGAAGAAAGAGGCATCCTAT 1587
consensus_4962#1      TTCGACCTGGCCAGTGAAGTGTCCAAGAACTCTACAAAGAAGAAGAAAGAGGCATCCTAT 1101
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      AAGCATCACAAGAAACCCCAGAGGAAGAAGGATCGTTCATGGAGGGTTGGAAATGATGGC 1647
consensus_4962#1      AAGCATCACAAGAAACCCCAGAGGAAGAAGGATCGTTCATGGAGGGTTGGAATTGATGGC 1161
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      GCTGATGGATCTGCTGTTGTTCGGGTGTTCCAGAAACCTGCCGTCAATTTTGCTACCGTT 1707
consensus_4962#1      GCTGATGGATCTGCTGTTGTTCGGGTGTTCCAGAAACCTGCCGTCAATTTTGCTACCGTT 1221
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      ACAGGTTAATGTTTTTTTGCGGCACTCTGTGCGACTTCATTCTCTTTTTTAGCTTACGGT 1767
consensus_4962#1      ACAGGTTAATGTTTTTTTGCGGCACTCTGTGCGACTTCATTCTCTTTTTTAGCTTACGGT 1281
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      AATTGAAGATGTCGTTGAAAGTCAAACTACATTTTATCCATTTTGTTTCATCTTCTGCTG 1827
consensus_4962#1      AATTGAAGATGTCGTTGAAAGTCAAACTACATTTTATCCATTTTGTTTCATCTTCTGCTG 1341
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      TTTGTTATGGCCATCTGTAATTCTGTATTGGAAATTTGGAATGGTACGCAATGTGGCTAT 1887
consensus_4962#1      TTTGTTATGGCCATCTGTAATTCTGTATTGGAAATTTGGAATGGTACGCAATGTGGCTAT 1401
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      T----------------------------------------------------------- 1888
consensus_4962#1      TTTTCGATGCTAGCTTTCATAGCATTTGACTGAAAGGATGAAACCTTATGAATGTTCCAT 1461
consensus_4962#2      ------------------------------------------------------------
                                                                                  

consensus_4962#0      -----
consensus_4962#1      TAGGT 1466
consensus_4962#2      -----


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)