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Oryza sativa
cluster # 4988 cluster # 4988       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4988#0 length = 1818 sequences # 1  
consensus_4988#1 length = 1448 sequences # 1  
consensus_4988#2 length = 1163 sequences # 1  

consensusID : consensus_4988#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1818
fasta sequence
                              [AACTCCGCCCCCGCCTCCTCGCTCCTCCCCCGCTGCCATAGCCCGCCGCCTCCTCGCTCCTCCTCGCCGCCCGCCCCACGAATCCCCGCGCCTCCTAGCTTCTCCTCCGCGCCCGCGAATCCCCGCCGCCTCCTCGCTCCGCGCGCATCCTCCCTCCTCGCGACGGGGCAGCGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGACGAGGTCGTCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCCGGAGCCGAGTTCTTCCCCATCCGCATTGGATCTGAATGCACCACATATCTTCCCCTCTGGAAATTATTATTTTTGGATGAAATTGACGGAATACCAATGGCTATTGCAACAAGACGTGAGGACTGGCAAGCCATCTCTTCATATATTTCTTGCTGATATGAGAACGTTCGAGGTATTGCCATATAATTGATTTGTATTTCAAGCTCCTCCTGCTGTAGCAGCAGTAAAAAAAATGCTCGAATGTGATTGGGCGACACATGTACATATGCTTTTAAGTCCCTTCAGCGACATCTGGAAACCTAGGATCTCACCTACAAAAATAGGAATCCAGGAGTTGGAGCCATTCGAACATGCAGCATGTCTCTTGCTAATGTCTTCCTGAGCTTTCAAATCATAAGGCCCTTGCCTCACTGATCAAAATATTCAGGTCACTAGAGGTTCTAATTTGCTTGCAATCCTTATGGTTTCCACTCATCACAGTGATAAGGCACCATATTCTTATGGCCAGTGCTTCTATGTTCTGAGCTTACTGGTATCCATATTTTTAAGCACTCTATTTCTTTGCTCTGGTTTCTTTTTTTGCAACCAGTTTCTGATGGAACATTTCTTATGGCTAGAAATTGTCACGTAATCTTCAATGCGCTCTAGAAATTTCAGATTGAGCTATTTGAATTTTGCTATGTTAATTTGAATAATACAGTATTCCAAAGCGGCAGTGGATCATTATAACCAACTACCACAAACTATTCAATTGCAGAATTTCTGCATTCCAATTTTTGCATTTCTCAATTTAATCATGTATTTTGGTTTGAGTAATTGCAAAGTAAAATTGATTTTGTAATTGTAAAAATGAATGAATTTTCTGGACAACATTTAATGTGATTTTATCAAAACACAATGAACCTTTTAATTTGTCCGTATAGTTCTGTTTTCTTTTATTTTCAAAAGTAAGATCCTCAGTATAAGCTTTTGTTTGTGGATCTCTTAATAATGAATATTGGGGGTCCAATCCTCTCTTGCTCCACCGTTGGACCAGTAGTAGCAGCAGGTTGGAAGCTGGTGAACACGATCTCAGGGAAGGACACAATGGCGGCTTCGTACGATCTCACATATGACAATTCTATCATTGCCTTAGATTTTACCAACCAAAGATGCAAGGGGTACTCATTCTTTTGATTTTGTCCAGATGGACAGCTCCAGTCCATAACATTCTATCTACACAGTCAACGACTCAGTTAATAATAAAACTGAAAAAATGTTCTCTTTTATTTTTAAATAAGATTTTCACACAACCTGAAAGTAAGATATCAAAGGAGCACTGGCCTGATATAAATGATTTTTTTCTGACGAATGTGGACTACCAATGTAATGCACATGCCTAAGATATTTAAGGTTTTCTTTTTTCTGCAGTACTTAAAGACTTGTATTTTGTAATATTGTAGGTTAAATCTCAACTTCTGATGTATCTCAAGTGTAAATATGGTCATTGTCATATTGCTAATATTTTGGATTTAATCAAATAAATGATGACC]

[+] EMBL AK070698             [AACTCCGCCCCCGCCTCCTCGCTCCTCCCCCGCTGCCATAGCCCGCCGCCTCCTCGCTCCTCCTCGCCGCCCGCCCCACGAATCCCCGCGCCTCCTAGCTTCTCCTCCGCGCCCGCGAATCCCCGCCGCCTCCTCGCTCCGCGCGCATCCTCCCTCCTCGCGACGGGGCAGCGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGACGAGGTCGTCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCCGGAGCCGAGTTCTTCCCCATCCGCATTGGATCTGAATGCACCACATATCTTCCCCTCTGGAAATTATTATTTTTGGATGAAATTGACGGAATACCAATGGCTATTGCAACAAGACGTGAGGACTGGCAAGCCATCTCTTCATATATTTCTTGCTGATATGAGAACGTTCGAGGTATTGCCATATAATTGATTTGTATTTCAAGCTCCTCCTGCTGTAGCAGCAGTAAAAAAAATGCTCGAATGTGATTGGGCGACACATGTACATATGCTTTTAAGTCCCTTCAGCGACATCTGGAAACCTAGGATCTCACCTACAAAAATAGGAATCCAGGAGTTGGAGCCATTCGAACATGCAGCATGTCTCTTGCTAATGTCTTCCTGAGCTTTCAAATCATAAGGCCCTTGCCTCACTGATCAAAATATTCAGGTCACTAGAGGTTCTAATTTGCTTGCAATCCTTATGGTTTCCACTCATCACAGTGATAAGGCACCATATTCTTATGGCCAGTGCTTCTATGTTCTGAGCTTACTGGTATCCATATTTTTAAGCACTCTATTTCTTTGCTCTGGTTTCTTTTTTTGCAACCAGTTTCTGATGGAACATTTCTTATGGCTAGAAATTGTCACGTAATCTTCAATGCGCTCTAGAAATTTCAGATTGAGCTATTTGAATTTTGCTATGTTAATTTGAATAATACAGTATTCCAAAGCGGCAGTGGATCATTATAACCAACTACCACAAACTATTCAATTGCAGAATTTCTGCATTCCAATTTTTGCATTTCTCAATTTAATCATGTATTTTGGTTTGAGTAATTGCAAAGTAAAATTGATTTTGTAATTGTAAAAATGAATGAATTTTCTGGACAACATTTAATGTGATTTTATCAAAACACAATGAACCTTTTAATTTGTCCGTATAGTTCTGTTTTCTTTTATTTTCAAAAGTAAGATCCTCAGTATAAGCTTTTGTTTGTGGATCTCTTAATAATGAATATTGGGGGTCCAATCCTCTCTTGCTCCACCGTTGGACCAGTAGTAGCAGCAGGTTGGAAGCTGGTGAACACGATCTCAGGGAAGGACACAATGGCGGCTTCGTACGATCTCACATATGACAATTCTATCATTGCCTTAGATTTTACCAACCAAAGATGCAAGGGGTACTCATTCTTTTGATTTTGTCCAGATGGACAGCTCCAGTCCATAACATTCTATCTACACAGTCAACGACTCAGTTAATAATAAAACTGAAAAAATGTTCTCTTTTATTTTTAAATAAGATTTTCACACAACCTGAAAGTAAGATATCAAAGGAGCACTGGCCTGATATAAATGATTTTTTTCTGACGAATGTGGACTACCAATGTAATGCACATGCCTAAGATATTTAAGGTTTTCTTTTTTCTGCAGTACTTAAAGACTTGTATTTTGTAATATTGTAGGTTAAATCTCAACTTCTGATGTATCTCAAGTGTAAATATGGTCATTGTCATATTGCTAATATTTTGGATTTAATCAAATAAATGATGACC]


>consensus_4988#0 AACTCCGCCCCCGCCTCCTCGCTCCTCCCCCGCTGCCATAGCCCGCCGCCTCCTCGCTCC TCCTCGCCGCCCGCCCCACGAATCCCCGCGCCTCCTAGCTTCTCCTCCGCGCCCGCGAAT CCCCGCCGCCTCCTCGCTCCGCGCGCATCCTCCCTCCTCGCGACGGGGCAGCGAGGTCGT CCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGACGAGGTCGTCCCCAGCCACCGCC GGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCCGGAGCCGAGTTCTT CCCCATCCGCATTGGATCTGAATGCACCACATATCTTCCCCTCTGGAAATTATTATTTTT GGATGAAATTGACGGAATACCAATGGCTATTGCAACAAGACGTGAGGACTGGCAAGCCAT CTCTTCATATATTTCTTGCTGATATGAGAACGTTCGAGGTATTGCCATATAATTGATTTG TATTTCAAGCTCCTCCTGCTGTAGCAGCAGTAAAAAAAATGCTCGAATGTGATTGGGCGA CACATGTACATATGCTTTTAAGTCCCTTCAGCGACATCTGGAAACCTAGGATCTCACCTA CAAAAATAGGAATCCAGGAGTTGGAGCCATTCGAACATGCAGCATGTCTCTTGCTAATGT CTTCCTGAGCTTTCAAATCATAAGGCCCTTGCCTCACTGATCAAAATATTCAGGTCACTA GAGGTTCTAATTTGCTTGCAATCCTTATGGTTTCCACTCATCACAGTGATAAGGCACCAT ATTCTTATGGCCAGTGCTTCTATGTTCTGAGCTTACTGGTATCCATATTTTTAAGCACTC TATTTCTTTGCTCTGGTTTCTTTTTTTGCAACCAGTTTCTGATGGAACATTTCTTATGGC TAGAAATTGTCACGTAATCTTCAATGCGCTCTAGAAATTTCAGATTGAGCTATTTGAATT TTGCTATGTTAATTTGAATAATACAGTATTCCAAAGCGGCAGTGGATCATTATAACCAAC TACCACAAACTATTCAATTGCAGAATTTCTGCATTCCAATTTTTGCATTTCTCAATTTAA TCATGTATTTTGGTTTGAGTAATTGCAAAGTAAAATTGATTTTGTAATTGTAAAAATGAA TGAATTTTCTGGACAACATTTAATGTGATTTTATCAAAACACAATGAACCTTTTAATTTG TCCGTATAGTTCTGTTTTCTTTTATTTTCAAAAGTAAGATCCTCAGTATAAGCTTTTGTT TGTGGATCTCTTAATAATGAATATTGGGGGTCCAATCCTCTCTTGCTCCACCGTTGGACC AGTAGTAGCAGCAGGTTGGAAGCTGGTGAACACGATCTCAGGGAAGGACACAATGGCGGC TTCGTACGATCTCACATATGACAATTCTATCATTGCCTTAGATTTTACCAACCAAAGATG CAAGGGGTACTCATTCTTTTGATTTTGTCCAGATGGACAGCTCCAGTCCATAACATTCTA TCTACACAGTCAACGACTCAGTTAATAATAAAACTGAAAAAATGTTCTCTTTTATTTTTA AATAAGATTTTCACACAACCTGAAAGTAAGATATCAAAGGAGCACTGGCCTGATATAAAT GATTTTTTTCTGACGAATGTGGACTACCAATGTAATGCACATGCCTAAGATATTTAAGGT TTTCTTTTTTCTGCAGTACTTAAAGACTTGTATTTTGTAATATTGTAGGTTAAATCTCAA CTTCTGATGTATCTCAAGTGTAAATATGGTCATTGTCATATTGCTAATATTTTGGATTTA ATCAAATAAATGATGACC



consensusID : consensus_4988#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1448
fasta sequence
                              [CCGCCGCGACAACTTCGCCCCCAAAATCGCCCCCGCCTCCTCGCCCCTCCTCGCCGCTGCCTCCTCGCTCCTCCTCGCCGCCCGGCGAATCCCCGCGCCTCCTCGCTTCTCCTCCACACCCACGAATCCCCGCCGTCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTAACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACCGATCTGTCCTGAACATGCAAATGCTGATGTGATGTTTTGGTTGCTCAGATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCATTGCTTGCAGTGACAAGTAAATAATACACATCATGTTCGCTTCTTTTGCAAAGCTGTTATGCCGCTGCCAGTTAATTGCTAATTGTATATCTCTGAAATTAATTTATACAGATCGATGGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAATACCATAAATACAAATATCTTGCTTTGAGCTTTTCAAGTGTTTATCAAGCTATGACAAATTATATGTT]

[+] EMBL AK073295             [CCGCCGCGACAACTTCGCCCCCAAAATCGCCCCCGCCTCCTCGCCCCTCCTCGCCGCTGCCTCCTCGCTCCTCCTCGCCGCCCGGCGAATCCCCGCGCCTCCTCGCTTCTCCTCCACACCCACGAATCCCCGCCGTCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTAACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACCGATCTGTCCTGAACATGCAAATGCTGATGTGATGTTTTGGTTGCTCAGATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCATTGCTTGCAGTGACAAGTAAATAATACACATCATGTTCGCTTCTTTTGCAAAGCTGTTATGCCGCTGCCAGTTAATTGCTAATTGTATATCTCTGAAATTAATTTATACAGATCGATGGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAATACCATAAATACAAATATCTTGCTTTGAGCTTTTCAAGTGTTTATCAAGCTATGACAAATTATATGTT]


>consensus_4988#1 CCGCCGCGACAACTTCGCCCCCAAAATCGCCCCCGCCTCCTCGCCCCTCCTCGCCGCTGC CTCCTCGCTCCTCCTCGCCGCCCGGCGAATCCCCGCGCCTCCTCGCTTCTCCTCCACACC CACGAATCCCCGCCGTCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCA ACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCC AGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAG CCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGA GGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACA TCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTAACCGTACACTCCACC GCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTG CCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAAC GCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAA GGTCTTCCTCCACCGATCTGTCCTGAACATGCAAATGCTGATGTGATGTTTTGGTTGCTC AGATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCA TGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCA TTGCTTGCAGTGACAAGTAAATAATACACATCATGTTCGCTTCTTTTGCAAAGCTGTTAT GCCGCTGCCAGTTAATTGCTAATTGTATATCTCTGAAATTAATTTATACAGATCGATGGG AATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGC TTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCG GAAGGATGCATCAATCTACAATTGCCATAGTCTAATAGTGGAACCCTTTCCTTGAGGGAA TTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCAC TTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATT GGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGT TGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAA TACCATAAATACAAATATCTTGCTTTGAGCTTTTCAAGTGTTTATCAAGCTATGACAAAT TATATGTT



consensusID : consensus_4988#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1163
fasta sequence
                              [GCCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTCACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACCGATCTGTCCTATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCATTGCTTGCAGTGACAAGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGGAAGATGCCTGATGCTAATGTCTTCTCAAGCTTTTGGATTTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAATACCATAAATACAAATA]

[+] EMBL AK060473             [GCCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTCACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACCGATCTGTCCTATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCATTGCTTGCAGTGACAAGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGGAAGATGCCTGATGCTAATGTCTTCTCAAGCTTTTGGATTTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAATACCATAAATACAAATA]


>consensus_4988#2 GCCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCC TTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAG CCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCC ATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACC GCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGC CGGCGAGAGCCTTCCTCCACTCCAGCGCCTCACCGTACACTCCACCGCAGCTCGGTCATC CTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAG AGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTT TCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACC GATCTGTCCTATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACA AATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTA CGTCACCATTGCTTGCAGTGACAAGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGA AGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTT CAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGGAAG ATGCCTGATGCTAATGTCTTCTCAAGCTTTTGGATTTCTAATAGTGGAACCCTTTCCTTG AGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGC TGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACAC CTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAG TATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTA ATTCAATACCATAAATACAAATA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4988#1      CCGCCGCGACAACTTCGCCCCCAAAATCGCCCCCGCCTCCTCGCCCCTCCTCGCCGCTGC 60
consensus_4988#2      ------------------------------------------------------------
consensus_4988#0      ----------AACTCCGCCCCCGCCTCCTCGCTC-CTCCCCCGCTGCCATAGCCCGCCGC 49
                                                                                  

consensus_4988#1      CTCCTCGCTCCTCCTCGCCGCCCG----GCGAATCCCCGCGCCTCCTCGCTTCTCCTCCA 116
consensus_4988#2      ------------------------------------------------------------
consensus_4988#0      CTCCTCGCTCCTCCTCGCCGCCCGCCCCACGAATCCCCGCGCCTCCTAGCTTCTCCTCCG 109
                                                                                  

consensus_4988#1      CACCCACGAATCCCCGCCGTCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGG 176
consensus_4988#2      ------------------GCCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGG 42
consensus_4988#0      CGCCCGCGAATCCCCGCCGCCTCCTCGCTCCGCGCGCATCCTCCCTCCT---CGCGACGG 166
                                        * ************ ****************   ********

consensus_4988#1      GGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCAT 236
consensus_4988#2      GGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCAT 102
consensus_4988#0      GGCAGCGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGACGAGGTCGT 226
                      **** **********************************************  ***** *

consensus_4988#1      CCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCT 296
consensus_4988#2      CCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCT 162
consensus_4988#0      CCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCC 286
                      *********************************************************** 

consensus_4988#1      GGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGC-----TGCCCCCGA 351
consensus_4988#2      GGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGC-----TGCCCCCGA 217
consensus_4988#0      GGAGCCGAGTTCTTCCCCATCCGCATTGG--ATCTGAATGCACCACATATCTTCCCCTCT 344
                      ***********************   ***    *  * * **** *     * ****   

consensus_4988#1      CGAAGTCGAGGTCTTC---CCCAACCG-CGGCCTGCC---------CCCGCCAGCGCTTG 398
consensus_4988#2      CGAAGTCGAGGTCTTC---CCCAACCG-CGGCCTGCC---------CCCGCCAGCGCTTG 264
consensus_4988#0      GGAAATTATTATTTTTGGATGAAATTGACGGAATACCAATGGCTATTGCAACAAGACGTG 404
                       *** *     * **       **  * ***  * **           *  **   * **

consensus_4988#1      AATACACTCAACCGATC-CAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCC 457
consensus_4988#2      AATACACTCAACCGATC-CAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCC 323
consensus_4988#0      AGGACTGGCAAGCCATCTCTTCATATATTTCTTGCTGATATGAGAACGTTCGAG-GTATT 463
                      *  **   *** * *** *  ***      *****      **** * ***         

consensus_4988#1      AGCGCCTAACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCAC----ACCGATAC 513
consensus_4988#2      AGCGCCTCACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCAC----ACCGATAC 379
consensus_4988#0      GCCATATAATTGATTTGTATTTCA-AGCTCCTCCTGCTGTAGCAGCAGTAAAAAAAATGC 522
                        *   * *  *     *    *  *****   *  *  ***  ***     *   ** *

consensus_4988#1      ACGAAGGCGA--GGTCGGAGCCCCTG---GTGCCGCCACGAGCGAGAGGCAATTCGCCGT 568
consensus_4988#2      ACGAAGGCGA--GGTCGGAGCCCCTG---GTGCCGCCACGAGCGAGAGGCAATTCGCCGT 434
consensus_4988#0      TCGAATGTGATTGGGCGACACATGTACATATGCTTTTAAGTCCCTTCAGCGACATCTGGA 582
                       **** * **  ** **   *   *     ***    * *  *     ** *      * 

consensus_4988#1      TGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAG---TGGTCCCTTTCCTGC-CGCC 624
consensus_4988#2      TGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAG---TGGTCCCTTTCCTGC-CGCC 490
consensus_4988#0      AACCTAGGATCTCACC-TACAAAAATAGGAATCCAGGAGTTGGAGCCATTCGAACATGCA 641
                        *    *  ***  * * **** *  ****  ** *   ***  ** ***   *  ** 

consensus_4988#1      GCAAGCGAGCAGTTG-CGTCGCTACATGC------ACCCCCAAGGTCTTCCTCCACCGAT 677
consensus_4988#2      GCAAGCGAGCAGTTG-CGTCGCTACATGC------ACCCCCAAGGTCTTCCTCCACCGAT 543
consensus_4988#0      GCATGTCTCTTGCTAATGTCTTCCTGAGCTTTCAAATCATAAGGCCCTTGCCTCACTGAT 701
                      *** *      * *   ***       **      * *   * *  *** *  *** ***

consensus_4988#1      C----TGTCCTGAACATGCAAAT-----GCTGATGTGATGTTTTGGTTGCTCAGATCCAT 728
consensus_4988#2      C----TGTCCT-------------------------------------------ATCCAT 556
consensus_4988#0      CAAAATATTCAGGTCACTAGAGGTTCTAATTTGCTTGCAATCCTTATGGTTTCCACTCAT 761
                      *    * * *                                            *  ***

consensus_4988#1      CA--GTGGGATTTCATCAA----CGACAAACATTGATAGTG-GTTCTGA-----CAAATA 776
consensus_4988#2      CA--GTGGGATTTCATCAA----CGACAAACATTGATAGTG-GTTCTGA-----CAAATA 604
consensus_4988#0      CACAGTGATAAGGCACCATATTCTTATGGCCAGTGCTTCTATGTTCTGAGCTTACTGGTA 821
                      **  ***  *   ** **       *    ** ** *  *  *******     *   **

consensus_4988#1      TTCATGTATAGTGGTTCGATCTACATCAGCTCGG---CCCGGTAATGCAGGAAGCTTTAC 833
consensus_4988#2      TTCATGTATAGTGGTTCGATCTACATCAGCTCGG---CCCGGTAATGCAGGAAGCTTTAC 661
consensus_4988#0      TCCATATTTTTAAGCACTCTATTTCTTTGCTCTGGTTTCTTTTTTTGCAACCAGTTTCTG 881
                      * *** * *    *  *  * *   *  **** *    *   *  ****   ** **   

consensus_4988#1      GTC-ACCATTGCTTGCAGTGACAAGTAAATAATACACATCATGTTCGCT-------TCTT 885
consensus_4988#2      GTC-ACCATTGCTTGCAGTGACAAG----------------------------------- 685
consensus_4988#0      ATGGAACATTTCTTATGGCTAGAAATTGTCACGTAATCTTCAATGCGCTCTAGAAATTTC 941
                       *  * **** ***   *  * **                                    

consensus_4988#1      TTGCAAAGCTGTTATGCCGCTGCCAGTTAATTGCTAATTGTATATC--TCTGAAATTAAT 943
consensus_4988#2      ------------------------------------------------------------
consensus_4988#0      AGATTGAGCTATTTGAATTTTGCTATGTTAATTTGAATAATACAGTATTCCAAAGCGGCA 1001
                                                                                  

consensus_4988#1      TTATACAGATCGATGGGAATACCACTAA---TTTAAGTGCT-----------CTCGAGTT 989
consensus_4988#2      ----------------GAATACCACTAA---TTTAAGTGCT-----------CTCGAGTT 715
consensus_4988#0      GTGGATCATTATAACCAACTACCACAAACTATTCAATTGCAGAATTTCTGCATTCCAATT 1061
                                       * ****** **   ** ** ***             ** * **

consensus_4988#1      AAAGAAGATAGCAAGCTTGG-ATGAGGTATGCTTTGCTCAATTGTAA-GCAGTAGCAAGC 1047
consensus_4988#2      AAAGAAGATAGCAAGCTTGG-ATGAGGTATGCTTTGCTCAATTGTAA-GCAGTAGCAAGC 773
consensus_4988#0      TTTGCATTTCTCAATTTAATCATGTATTTTGGTTTGAGTAATTGCAAAGTAAAATTGATT 1121
                         * *  *  ***  *    ***   * ** ****   ***** ** * *  *   *  

consensus_4988#1      TAAGGTTCAACAGAACCA-TGAGTAC---AAGCAGCGG-----AAGGATGCATCAATCTA 1098
consensus_4988#2      TAAGGTTCAACAGAACCA-TGAGTAC---AAGCAGCGG-----AAGGATGCATCAATCTA 824
consensus_4988#0      TTGTAATTGTAAAAATGAATGAATTTTCTGGACAACATTTAATGTGATTTTATCAAAACA 1181
                      *     *    * **  * *** *        ** *         *  *  *****   *

consensus_4988#1      CAATTGCCATAG-----------------------------------------TCTAAT- 1116
consensus_4988#2      CAATTGCCATAGGAAGATGCCTG-ATGCTAATGTCTTCTCAAGCTTTTGGATTTCTAAT- 882
consensus_4988#0      CAATGAACCTTTTAATTTGTCCGTATAGTTCTGTTTTCTTTTATTTTCAAAAGTAAGATC 1241
                      ****   * *                                           *   ** 

consensus_4988#1      ---AGTGGAACCCTTTCCTTGAGGGAATTCCA-TGAAAGATATTGGTCTCCAGATTTTAA 1172
consensus_4988#2      ---AGTGGAACCCTTTCCTTGAGGGAATTCCA-TGAAAGATATTGGTCTCCAGATTTTAA 938
consensus_4988#0      CTCAGTATAAGCTTTTGTTTGTGGATCTCTTAATAATGAATATTGGGGGTCCAATCCTCT 1301
                         ***  ** * ***  *** **   *   * * *   *******    *  **  *  

consensus_4988#1      GAT------TGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCT 1226
consensus_4988#2      GAT------TGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCT 992
consensus_4988#0      CTTGCTCCACCGTTGGACCAGTAGTAGCAGCAGGTTGGAAGCTGGTGAACACGATCTCAG 1361
                        *        ** *  **  * ** ** **   **  *     *   *** ** **   

consensus_4988#1      GTGGACCCACGGCAGGAGCTGTATAC-ACCTCAT---TGGTGATCATGTAAATGCTAT-- 1280
consensus_4988#2      GTGGACCCACGGCAGGAGCTGTATAC-ACCTCAT---TGGTGATCATGTAAATGCTAT-- 1046
consensus_4988#0      GGAAGGACACAATGGCGGCTTCGTACGATCTCACATATGACAATTCTATCATTGCCTTAG 1421
                      *      ***    *  ***   *** * ****    **   **  * * * ***  *  

consensus_4988#1      -TTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTT 1339
consensus_4988#2      -TTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTT 1105
consensus_4988#0      ATTTTACCAACCAAAGATGCAAGGGGTACTCATTCTTTTGATTTTGTCCAGATGGACAGC 1481
                       *****    *     *** * *   ** *     * *** *  **   *  **      

consensus_4988#1      TTTTCCTGATAAGATATTGT--AGGCTGTGGG-GTTTAATTCAATACCATAAATACAAAT 1396
consensus_4988#2      TTTTCCTGATAAGATATTGT--AGGCTGTGGG-GTTTAATTCAATACCATAAATACAAAT 1162
consensus_4988#0      TCCAGTCCATAACATTCTATCTACACAGTCAACGACTCAGTTAATAATAAAACTGAAAAA 1541
                      *       **** **  * *  *  * **    *  * * * ****  * ** *  *** 

consensus_4988#1      ATCTTGCTTTGAGCTTTTCAA-GTGTTTATCAAGCTATGACAAATTATATGTT------- 1448
consensus_4988#2      A----------------------------------------------------------- 1163
consensus_4988#0      ATGTTCTCTTTTATTTTTAAATAAGATTTTCACACAACCTGAAAGTAAGATATCAAAGGA 1601
                      *                                                           

consensus_4988#1      ------------------------------------------------------------
consensus_4988#2      ------------------------------------------------------------
consensus_4988#0      GCACTGGCCTGATATAAATGATTTTTTTCTGACGAATGTGGACTACCAATGTAATGCACA 1661
                                                                                  

consensus_4988#1      ------------------------------------------------------------
consensus_4988#2      ------------------------------------------------------------
consensus_4988#0      TGCCTAAGATATTTAAGGTTTTCTTTTTTCTGCAGTACTTAAAGACTTGTATTTTGTAAT 1721
                                                                                  

consensus_4988#1      ------------------------------------------------------------
consensus_4988#2      ------------------------------------------------------------
consensus_4988#0      ATTGTAGGTTAAATCTCAACTTCTGATGTATCTCAAGTGTAAATATGGTCATTGTCATAT 1781
                                                                                  

consensus_4988#1      -------------------------------------
consensus_4988#2      -------------------------------------
consensus_4988#0      TGCTAATATTTTGGATTTAATCAAATAAATGATGACC 1818
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)