cluster # 4989

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Oryza sativa
cluster # 4989 cluster # 4989 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4989#0 length = 918 sequences # 3

consensusID : consensus_4989#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 918
fasta sequence

                              [CCGACGCGCGCCCCACCGACAAGACCCCGCTCCGCCGCCACGCGCTGCGGGCGCTCGCGCTCGTCGCCGCGGCGCACCCGCGCGACGCCGTGGCGCCGCTCGTCCCGCGCATCCTCGCCGCCGCACTCCGCCGCGTCCGGGACCAGGACTCCTCCGTGCGCGCCGCGCTCGTCGACACCGCGCGCGCGGCGGCGGCCGCGTCCGCCTCCGCCTCCCCGGCGCTCCGACCCCTCACCGACGCGCTCCTCCACGAGCAGGACCAGTGCGCGCAGACGGCGGCCGCGCTCGCCACGGACGCCGTCGTCGAGGCCTCGGCCCCCACCGCCGACCTCGCTTCCTACATCCACAAGCTCCAACCCCGCCTCCTCAAGCTCCTCCGCAGCAATGCCTTCAAAGCCAAGCCCGCGCTCATCTCTCTCATTGGCGTCTCTGCATCCGCGGCCGGCGCCGCTGAAGTCACCGCCTCTGTCCCGTGCCTCCGCGACACAATCGCCAGCGACGACTGGGCGGCGAGAAAGGCCGCGGCCGAGGCTCTTGCTGCATTGGCCTTAGAACATAAGGATCTTCTCGTCAGCTACAAATCTTCTTGCATCACCATGTTCGAGGCCAGGAGGTTTGACAAGGTCAAGATTGTGCGAGATTCGATGAACAGGATGATCGAGGCATGGAAGGAGATCCCGGGATGTTGAAGAGGACGAATGCTCCTCCGGTGCGCCANCGGCATCGCACTCTCAACGACGATCTTCTCTTGAANGGAGTGCAA-TGATGGGCGATATCCGGTTGCATCGTCGACCAGGAGGAATAGTCTACCTGCAAGCAAGTCGCCTCCTCCTGATGCCTCANCCAGTGTTCAACAAAAAAGCATAGTNTTCATCAGCTANGAAACAAGAAGCAATNCAACTCCTTTCATATCGCAAA]

[+] EMBL CB636731             [CCGACGCGCGCCCCACCGACAAGACCCCGCTCCGCCGCCACGCGCTGCGGGCGCTCGCGCTCGTCGCCGCGGCGCACCCGCGCGACGCCGTGGCGCCGCTCGTCCCGCGCATCCTCGCCGCCGCACTCCGCCGCGTCCGGGACCAGGACTCCTCCGTGCGCGCCGCGCTCGTCGACACCGCGCGCGCGGCGGCGGCCGCGTCCGCCTCCGCCTCCCCGGCGCTCCGACCCCTCACCGACGCGCTCCTCCACGAGCAGGACCAGTGCGCGCAGACGGCGGCCGCGCTCGCCACGGACGCCGTCGTCGAGGCCTCGGCCCCCACCGCCGACCTCGCTTCCTACATCCACAAGCTCCAACCCCGTCTCCTCAAGCTCCTCCGCAGCAATGCCTTCAAAGCCAAGCCCGCGCTCATATATCTCAGTGGCGTCTGTGCATCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C97391               [                                                                                                                                                                                                                                                                                                                        CGGCCCCCACCGCCGACCTCGCTTCCTACATCCACAAGCTCCAACCCCGCCTCCTCAAGCTCCTCCGCAGCAATGCCTTCAAAGCCAAGCCCGCGCTCATCTCTCTCATTGGCGTCTCTGCATCCGCGGCCGGCGCCGCTGAAGTCACCGCCTCTGTCCCGTGCCTCCGCGACACAATCGCCAGCGACGACTGGGCGGCGAGAAAGGCCGCGGCCGAGGCTCTTGCTGCATTGGCCTTAGAACATAAGGATCTTCTCGTCAGCTACAAATCTTCTTGCATCACCATGTTCGAGGCCAGGAGGTTTGACAAGGTCAAGATTGTGCGAGATTCGATGAACAGGATGATCGAGGCATGGAAGGAGATCCCGGGATGTTGAAGAGGACGAATGCTCCTCCGGTGCGCCANCGGCATCGCACTCTCAACGACGATCTTCTCTTGAANGGAGTGCAA TGATGGGCGATATCCGGTTGCATCGTCGACCAGGAGGAATAGTCTACCTGCAAGCAAGTCGCCTCCTCCTGATGCCTCANCCAGTGTTCAACAAAAAAGCATAGTNTTCATCAGCTANGAAACAAGAAGCAATNCAACTCCTTTCATATCGCAAA]
[-] EMBL BU667335             [                                                                                                                                                                                                                                                                                                                                             CTTCCTACATCCACAAGCTCCAACCCCGCCTCCTCAAGCTCCTCCGCAGCAATGCCTTCAAAGCCAAGCCCGCGCTCATCTCTCTCATTGGCGTCTCTGCATCCGCGGCCGGCGCCGCTGAAGTCACCGCCTCTGTCCCGTGCCTCCGCGACACAATCGCCAGCGACGACTGGGCGGCGAGAAAGGCCGCGGCCGAGGCTCTTGCTGCATTGGCCTTAGAACATAAGGATCTTCTCGTCAGCTACAAATCTTCTTGCATCACCATGTTCGAGGCCAGGAGGTTTGACAAGGTCAAGA TGTGCGAGATTCGATGAACAGGATGATCGAGGCATGGAAGGAGATCCC GGATGTTGAAGAGGACGAATGCTCCTCCGGTGCGCCACCGGCATCGCACTCTCAACGACGATCTTCTCTTGCAGGGAGTGCAAGTGATGGGCGATATCCGGTTGCATCGTCGA CAGGAGG                                                                                                                      ]




>consensus_4989#0
CCGACGCGCGCCCCACCGACAAGACCCCGCTCCGCCGCCACGCGCTGCGGGCGCTCGCGC
TCGTCGCCGCGGCGCACCCGCGCGACGCCGTGGCGCCGCTCGTCCCGCGCATCCTCGCCG
CCGCACTCCGCCGCGTCCGGGACCAGGACTCCTCCGTGCGCGCCGCGCTCGTCGACACCG
CGCGCGCGGCGGCGGCCGCGTCCGCCTCCGCCTCCCCGGCGCTCCGACCCCTCACCGACG
CGCTCCTCCACGAGCAGGACCAGTGCGCGCAGACGGCGGCCGCGCTCGCCACGGACGCCG
TCGTCGAGGCCTCGGCCCCCACCGCCGACCTCGCTTCCTACATCCACAAGCTCCAACCCC
GCCTCCTCAAGCTCCTCCGCAGCAATGCCTTCAAAGCCAAGCCCGCGCTCATCTCTCTCA
TTGGCGTCTCTGCATCCGCGGCCGGCGCCGCTGAAGTCACCGCCTCTGTCCCGTGCCTCC
GCGACACAATCGCCAGCGACGACTGGGCGGCGAGAAAGGCCGCGGCCGAGGCTCTTGCTG
CATTGGCCTTAGAACATAAGGATCTTCTCGTCAGCTACAAATCTTCTTGCATCACCATGT
TCGAGGCCAGGAGGTTTGACAAGGTCAAGATTGTGCGAGATTCGATGAACAGGATGATCG
AGGCATGGAAGGAGATCCCGGGATGTTGAAGAGGACGAATGCTCCTCCGGTGCGCCANCG
GCATCGCACTCTCAACGACGATCTTCTCTTGAANGGAGTGCAATGATGGGCGATATCCGG
TTGCATCGTCGACCAGGAGGAATAGTCTACCTGCAAGCAAGTCGCCTCCTCCTGATGCCT
CANCCAGTGTTCAACAAAAAAGCATAGTNTTCATCAGCTANGAAACAAGAAGCAATNCAA
CTCCTTTCATATCGCAAA

clustalw multiple alignements is not computed in this case