cluster # 4995

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Oryza sativa
cluster # 4995 cluster # 4995 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4995#0 length = 1973 sequences # 3
consensusID : consensus_4995#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1973
fasta sequence
                              [TGCGTGACTGCCAGCAGCAGCAGCAAGCGGAGGAGAGGAGAGACGCGCCGCCGCCGCCGCCGCCTGCGAAGCAAAGCGGCGAGCGAGAAGCCAACGGCGCATCAAAGTGAGGATATGGAGAGGGGCGCCGCCGCCGCAGGAGCGCTCTCATGCACCTTCCGCTCCCCTTCCCCTTCCCCGACGTCCCCGGCCGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCCCGCTCGCGTGGCCGGGGCTGGGGCCAGCGCGCGGTGGTCGCCGGGGCACCGCGGTTATTCCTGCCGCCACCATGCCGGCGCTTCAGATACTGCAGTCAAAGCAAGCTTCTAGGCACGAACAAAGGGCAAAACAGATGCTCGTTGGCAACTTTCAGCTCATTTGGACAGTCAGGGATCAGTCTGAACAATGAAGATTTAGTGAAAGATAAGCTCCTAATAGATTGTGGGGAAGATCAAGATTGTGTGATTGATGGGATAGTTGCCTTGGGAAAGTTTGATGCCCTTCACATTGGCCATCGAGAATTGGCAATGTATGCTTCTAAGGCAGGAACTCCCTTTCTTCTTTCTTTTGTGGGAATTGCTGAGGTTCTTGGCTGGGAGTATAGGCCTCCTATAGTTGCTCAGTGTGATCGGAAGCGAGTGCTCACCTCTTGGGCTCCATACTGTAAGAATGTAGTGCCTATTGAATATCAAGTTGAGTTTTCAAAGGTCAGGTACCTAACTCCGCGGCAATTCGTTGAGAGGTTATCAAGGGATCTTAAAATACAAGGTGCTGTAGCAGGTGAAAACTACAGATTTGGCTACAGGGCATCTGGCGATGCAGCTGAGCTAGTGAAACTATGTGAAGAATTTGGTTTAAGTGCATTTATTGTACGGTCAGTCATGGACACAGCTAGATCTTATAATGGAGTTACAACCTCCGTAAATTCAAGCGACAAGGGGCAGGTTTCTTCTAGTCGTGTTCGCCATGCTTTGGCTATGGGTGATATGGAATATGTTTCTGAATTACTAGGGAGGAAACACCGCCTTGTGCTGACAGTTAAGGAAAACCACCTTCAGGAAAGGAAAAGGATCATGCTGCCAAAATCTTGCATGTTGAACATGCCACCAGCTGATGGTTTGTATGAGAATTGTGACCTTCTTAATGGAGGCCATCTTGGACTATGCAGGGTGATCATAAACTCAGAGACCATTGTAATTGAGATGAAAGATGAGAACAGTTTATTACCAAATACTATTCAAGAAAATCAGCAATTAGGTATTGAATTTGGATGATATGGTACAGCTCAATTCATGATTGGTGACATGGCAGGTCATATTTTGTACTATATCTTCATTATATCTGGCACCTTGCGGATTAGTTTGTGTTGATGCTAAATAGTGCTGATTTT-ATCTGGAGGGGATATAGAGCAAGAAAGAAAAAAACTGAGAACTTTGTATTCAAGGGTGTATACCTCATCGTGATCAAGCCAAAGAGCATCTTATAGATGAACAGAGATTTTGTGCA-AATTTGCATTTCATGCAACGAGAAGACATGGTAGTCAGAGAGGACATTGTCC-TTTTTCTCCCTGGGAATTGGCAACGATAGAACTGACTAGCTTCTAGCTAGCTGTATCAGCAAAGCTGAAGCACAAGGAAACATACAAGGGAACTCA-TTTCCCAAATCCCACCTAGTA-CGTTTTTCCAGCTTATGAAATTGTGATTTGTA-CAAATAGGTTTCATTTACACAGCAACTTCCCATTGTTAGATAGCAGCTTGTTCCATCAACAGTTAATG-AAATATGTTGCTTGACCTTCGAACATCTGGGNAGGGCTGGGCCCTNACAAC-GTNGGGTTAANCCAAATCTAGCTTATGAAATTGTGATTTGCACAAATAGGTTTCATTTACACAGCACTTTCCATTATTAGATTGCTGCCTGTTCTATCAACAGTTAATGAAATGTGTTGCTTGATCAAAAA]

[+] EMBL AK069505             [TGCGTGACTGCCAGCAGCAGCAGCAAGCGGAGGAGAGGAGAGACGCGCCGCCGCCGCCGCCGCCTGCGAAGCAAAGCGGCGAGCGAGAAGCCAACGGCGCATCAAAGTGAGGATATGGAGAGGGGCGCCGCCGCCGCAGGAGCGCTCTCATGCACCTTCCGCTCCCCTTCCCCTTCCCCGACGTCCCCGGCCGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCCCGCTCGCGTGGCCGGGGCTGGGGCCAGCGCGCGGTGGTCGCCGGGGCACCGCGGTTATTCCTGCCGCCACCATGCCGGCGCTTCAGATACTGCAGTCAAAGCAAGCTTCTAGGCACGAACAAAGGGCAAAACAGATGCTCGTTGGCAACTTTCAGCTCATTTGGACAGTCAGGGATCAGTCTGAACAATGAAGATTTAGTGAAAGATAAGCTCCTAATAGATTGTGGGGAAGATCAAGATTGTGTGATTGATGGGATAGTTGCCTTGGGAAAGTTTGATGCCCTTCACATTGGCCATCGAGAATTGGCAATGTATGCTTCTAAGGCAGGAACTCCCTTTCTTCTTTCTTTTGTGGGAATTGCTGAGGTTCTTGGCTGGGAGTATAGGCCTCCTATAGTTGCTCAGTGTGATCGGAAGCGAGTGCTCACCTCTTGGGCTCCATACTGTAAGAATGTAGTGCCTATTGAATATCAAGTTGAGTTTTCAAAGGTCAGGTACCTAACTCCGCGGCAATTCGTTGAGAGGTTATCAAGGGATCTTAAAATACAAGGTGCTGTAGCAGGTGAAAACTACAGATTTGGCTACAGGGCATCTGGCGATGCAGCTGAGCTAGTGAAACTATGTGAAGAATTTGGTTTAAGTGCATTTATTGTACGGTCAGTCATGGACACAGCTAGATCTTATAATGGAGTTACAACCTCCGTAAATTCAAGCGACAAGGGGCAGGTTTCTTCTAGTCGTGTTCGCCATGCTTTGGCTATGGGTGATATGGAATATGTTTCTGAATTACTAGGGAGGAAACACCGCCTTGTGCTGACAGTTAAGGAAAACCACCTTCAGGAAAGGAAAAGGATCATGCTGCCAAAATCTTGCATGTTGAACATGCCACCAGCTGATGGTTTGTATGAGAATTGTGACCTTCTTAATGGAGGCCATCTTGGACTATGCAGGGTGATCATAAACTCAGAGACCATTGTAATTGAGATGAAAGATGAGAACAGTTTATTACCAAATACTATTCAAGAAAATCAGCAATTAGGTATTGAATTTGGATGATATGGTACAGCTCAATTCATGATTGGTGACATGGCAGGTCATATTTTGTACTATATCTTCATTATATCTGGCACCTTGCGGATTAGTTTGTGTTGATGCTAAATAGTGCTGATTTT ATCTGGAGGGGATATAGAGCAAGAAAGAAAAAAACTGAGAACTTTGTATTCAAGGGTGTATACCTCATCGTGATCAAGCCAAAGAGCATCTTATAGATGAACAGAGATTTTGTGCA AATTTGCATTTCATGCAACGAGAAGACATGGTAGTCAGAGAGGACATTGTCC TTTTTCTCCCTGGGAATTGGCAACGATAGAACTGACTAGCTTCTAGCTAGCTGTATCAGCAAAGCTGAAGCACAAGGAAACATACAAGGGAACTCA TTTCCCAAATCCCACCTAGTA CGTTTTTCCAGCTTATGAAATTGTGATTTGTA CAAATAGGTTTCATTTACACAGCAACTTCCCATTGTTAGATAGCAGCTTGTTCCATCAACAGTTAATG AAATATGTTGC                                                                                                                                                                            ]
[+] EMBL CA763932             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCTAGTCGTGTTCGCCATGCTTTGGCTATGGGTGATATGGAATATGTTTCTGAATTACTAGGGAGGAAACACCGCCTTGTGCTGACAGTTAAGGAAAACCACCTTCAGGAAAGGAAAAGGATCATGCTGCCAAAATCTTGCATGTTGAACATGCCACCAGCTGATGGTTTGTATGAGAATTGTGACCTTGTTAATGGAGGCCATCTTGGACTATGCAGGGTGATCATAAACTCAGAGACCATTGAAATTGAGATGAAAGATGAGAACAGTTTATTACCAAATACTATTCAAGAAAATCAGCAATTAGGTATTGAATTTGGATGATATGGTACAGCTCAATTCATGATTGGTGATATGGCAGGTCATATTTTGTACTATATCTTCATTATATCTGGCACCTTGCGGATTAGTTTGTGTTGATGCTAAATAGTGCTGATTTT ATCTGGAGGGGATATAGAGCAAGAAAGAAAAAAACTGAGAACTTTGTATTCAAGGGTGTATACCTCATCGTGATCAAGCCAAAGAGCATCTTATAGATGAACAGAGATTTTGTGCA AATTTGCATTTCATGCAACGAGAAGACATGGTAGTCAGAGAGGACATTGNCCNTTTCTCTNCCTGGGAATTGGCTACGATAGAACTGACTAGCTTCTAGCTAGCTGTATCAGCAAAGCTGAAGCNCAAGGAAACATACCANGGNACTCANTTTCCCAAAT CCACCTANTACCGNTTTTNCAGCTTATGNAATTGGGANTTGGACCAAANAGGNTTCATTTACACAGCAACTTNCCATTGGTANANAGCAGCTTGGTNCATCAACAGTGGAGGNAAAAAGGTGGCTTGACCTTCGAACATCTGGGNAGGGCTGGGCCCTNACAACGGTNGGGTTAANCCAA                                                                                                                    ]
[+] EMBL BI805813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTT CGGATTAGTTTGT TTGATGCTAAATAGTGCTGATTTTGATCTGGAGGGGATATAGA CAAGAAAG AAAAAACTGAGAACTTTGTATTCAAGGGTGTATACCTCATCGTGATCAAGCCCAAGAGCATCTTATAGATGAACAGAGATTTTGTGCACAATTTGCATTTCATGCAACGAGAAGACATGGTAGTCAGAGAGGAC TTGTCC TTTTTCT CCTGGGAATTGGCAACGATAGAACTGACTAGCTTCTAGCTAGCTGTATCAGC AAGCTGAAGCACAAGGAAACATACAAGGGAACTCA TTTCCC AATCCCACCTAGTA CGTTTTTCCAGCTTATGAAATTGTGATTTGTA C AATAGGTTTCATTTACACAGC ACTTCCCATTGTTAGATAGCAGCTTGTTCCATCAACAGTTAATG AAATATGTTGCTTGATCTTCGAACATCTGGAGAGGTCTGGTCCCTAACAAC GTTGAGTTTAGCCTAATCTAGCTTATGAAATTGTGATTTGCACAAATAGGTTTCATTTACACAGCACTTTCCATTATTAGATTGCTGCCTGTTCTATCAACAGTTAATGAAATGTGTTGCTTGATCAAAAA]




>consensus_4995#0
TGCGTGACTGCCAGCAGCAGCAGCAAGCGGAGGAGAGGAGAGACGCGCCGCCGCCGCCGC
CGCCTGCGAAGCAAAGCGGCGAGCGAGAAGCCAACGGCGCATCAAAGTGAGGATATGGAG
AGGGGCGCCGCCGCCGCAGGAGCGCTCTCATGCACCTTCCGCTCCCCTTCCCCTTCCCCG
ACGTCCCCGGCCGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCCCGCTCG
CGTGGCCGGGGCTGGGGCCAGCGCGCGGTGGTCGCCGGGGCACCGCGGTTATTCCTGCCG
CCACCATGCCGGCGCTTCAGATACTGCAGTCAAAGCAAGCTTCTAGGCACGAACAAAGGG
CAAAACAGATGCTCGTTGGCAACTTTCAGCTCATTTGGACAGTCAGGGATCAGTCTGAAC
AATGAAGATTTAGTGAAAGATAAGCTCCTAATAGATTGTGGGGAAGATCAAGATTGTGTG
ATTGATGGGATAGTTGCCTTGGGAAAGTTTGATGCCCTTCACATTGGCCATCGAGAATTG
GCAATGTATGCTTCTAAGGCAGGAACTCCCTTTCTTCTTTCTTTTGTGGGAATTGCTGAG
GTTCTTGGCTGGGAGTATAGGCCTCCTATAGTTGCTCAGTGTGATCGGAAGCGAGTGCTC
ACCTCTTGGGCTCCATACTGTAAGAATGTAGTGCCTATTGAATATCAAGTTGAGTTTTCA
AAGGTCAGGTACCTAACTCCGCGGCAATTCGTTGAGAGGTTATCAAGGGATCTTAAAATA
CAAGGTGCTGTAGCAGGTGAAAACTACAGATTTGGCTACAGGGCATCTGGCGATGCAGCT
GAGCTAGTGAAACTATGTGAAGAATTTGGTTTAAGTGCATTTATTGTACGGTCAGTCATG
GACACAGCTAGATCTTATAATGGAGTTACAACCTCCGTAAATTCAAGCGACAAGGGGCAG
GTTTCTTCTAGTCGTGTTCGCCATGCTTTGGCTATGGGTGATATGGAATATGTTTCTGAA
TTACTAGGGAGGAAACACCGCCTTGTGCTGACAGTTAAGGAAAACCACCTTCAGGAAAGG
AAAAGGATCATGCTGCCAAAATCTTGCATGTTGAACATGCCACCAGCTGATGGTTTGTAT
GAGAATTGTGACCTTCTTAATGGAGGCCATCTTGGACTATGCAGGGTGATCATAAACTCA
GAGACCATTGTAATTGAGATGAAAGATGAGAACAGTTTATTACCAAATACTATTCAAGAA
AATCAGCAATTAGGTATTGAATTTGGATGATATGGTACAGCTCAATTCATGATTGGTGAC
ATGGCAGGTCATATTTTGTACTATATCTTCATTATATCTGGCACCTTGCGGATTAGTTTG
TGTTGATGCTAAATAGTGCTGATTTTATCTGGAGGGGATATAGAGCAAGAAAGAAAAAAA
CTGAGAACTTTGTATTCAAGGGTGTATACCTCATCGTGATCAAGCCAAAGAGCATCTTAT
AGATGAACAGAGATTTTGTGCAAATTTGCATTTCATGCAACGAGAAGACATGGTAGTCAG
AGAGGACATTGTCCTTTTTCTCCCTGGGAATTGGCAACGATAGAACTGACTAGCTTCTAG
CTAGCTGTATCAGCAAAGCTGAAGCACAAGGAAACATACAAGGGAACTCATTTCCCAAAT
CCCACCTAGTACGTTTTTCCAGCTTATGAAATTGTGATTTGTACAAATAGGTTTCATTTA
CACAGCAACTTCCCATTGTTAGATAGCAGCTTGTTCCATCAACAGTTAATGAAATATGTT
GCTTGACCTTCGAACATCTGGGNAGGGCTGGGCCCTNACAACGTNGGGTTAANCCAAATC
TAGCTTATGAAATTGTGATTTGCACAAATAGGTTTCATTTACACAGCACTTTCCATTATT
AGATTGCTGCCTGTTCTATCAACAGTTAATGAAATGTGTTGCTTGATCAAAAA
clustalw multiple alignements is not computed in this case