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Oryza sativa
cluster # 5003 cluster # 5003       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5003#0 length = 2815 sequences # 1  
 consensus_5003#1 length = 1320 sequences # 2  
consensusID : consensus_5003#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2815
fasta sequence 
                              [TGGCAATGCCGAGCATCCGAGCTCCGGCTTCCAAGCAGACGGCCACGCTACAGGTGGCTGTGAAGTGCAGGCCACTGACAGACAGCGAGCAGCGGCGTTCGCGGCATATCATACAAGTCATTGATGATAAGAATGTCGTTGTGCTGGACCCTGATCTGTCCAAGGACTACCTTGAACTCATCCAAAACAGGACCAAGGAGAGAAGATACAGCTTCGATCATGTGTATGCGCCCGGGTGCTCCAATGCGGATGTATATAAGAATATATCTTCTACAATTGCTGGTGTAGTTCAAGGCCTTAATGCGACAGTCTTTGCTTATGGTTCTACTGGAAGTGGGAAAACTTATACAATGGTTGGAACCCATAGTGATCCTGGTCTTATGGTTCTGAGCTTTCGCACAATCTTTGATCTGGTAAAGAAGGATGACAGTAAAGATACGTTTGAGGTCTCATGTTCATATCTTGAAGTGTACAATGAGGTTATCTATGATTTGCTTGAAAAATCGTCAGGTCACCTGGAGCTTCGTGAAGATCCTGTGCATGGTATAATGGTTGCTGGTTTAAGAAGCATTAAGGTTCACTCAGCAGATAAGATTCTTGAACTCTTGAACATAGGCAACAGTCGGCGCAAGACAGAGAGCACAGAAGCAAACTCAACTTCTTCACGGTCACATGCTGTCCTGGAGATAACTGTGAAGCGAAAACAAAAAGGACAATATGGTAGTCAGGTTCTTCGTGGAAAGCTTGCGTTGGTTGACCTTGCGGGCAGTGAGAGGGCCTCTGAAACAAACAACTTTGGGCAAAAGCTTAGAGATGGAGCCAACATTAACCGTTCACTTCTAGCGCTAGCGAACTGCATCAATGCCCTTGGCAAGCAAAACAAGAAAGGTCTTGCATATGTTCCATATCGAAACAGCAAATTAACACGAATCCTGAAGGATGGGCTCTCTGGTAACTCTCGTACTGTTATGGTTGCTACGATATCACCAGCTGATGATCAGTATCATCACACCACCAATACACTCAAGTATGCTGATCGTGCAAAGGAGATAAAAACACATGTCCATAAAAACATTGGACATCTTGACACCCATGTTGAAGACTACAAAAGGATGATTGACAATCTCCAGGTTGAGGTTTCTCAGTTGAAGAAGGAATTAGCTGAGAAGGAGCATCAGTTAAGTGTAAAACCTACTGAAAAAGCTGCAGACAATGAGCTATCTTGGCTAAATATCTTGAGCCAGGAAACTGGCGAGAATGTTCAAGAACGCATTAATCTGCAGAAAGCACTGTTTGAACTTGAAGAAACCAATAAGCGCAATCGAATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTGAAAGATAAGGATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCGACAATGATGAAGCTGGTGCTGGCTACAGAAAGGATATTGAACTGAATGAGAGTCGCAAACGTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCCACATTCTCAGTCAGTACAGACTTCTTGGGATGACTAATGCCGAGCTTCAAATTGAGATGGCTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTATTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAACTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTTCACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATTCCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAACATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGTGCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTTCTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAACTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCTTGTACAAATAAAGGTAAACAGTCTTCCCTTATACACAAAAACAATGATTGGAAATCTGTAATGCACGTGGTCCCAAGTAGACATGGTTTTTCATGTAGTAAGAGAACCTAAAATGAAAAAGGAAGTAACATCAACTTAAATAAGCATAGCATTCCAAATGTGTTACTAGCGCACCAATTAAGGTAAAAAGAACAATGTTATCTCAAACAACAGAATATTTCAGAAGTGAAATTGCAACTTGTCTTAATCTGCAGGATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGGAAGGACATCATCAGCACTCTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATCTTCTGCCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTAGGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATGATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTTGAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGAATGCTGTAAGCATGTAAATCTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACA]

[+] EMBL AK103310             [TGGCAATGCCGAGCATCCGAGCTCCGGCTTCCAAGCAGACGGCCACGCTACAGGTGGCTGTGAAGTGCAGGCCACTGACAGACAGCGAGCAGCGGCGTTCGCGGCATATCATACAAGTCATTGATGATAAGAATGTCGTTGTGCTGGACCCTGATCTGTCCAAGGACTACCTTGAACTCATCCAAAACAGGACCAAGGAGAGAAGATACAGCTTCGATCATGTGTATGCGCCCGGGTGCTCCAATGCGGATGTATATAAGAATATATCTTCTACAATTGCTGGTGTAGTTCAAGGCCTTAATGCGACAGTCTTTGCTTATGGTTCTACTGGAAGTGGGAAAACTTATACAATGGTTGGAACCCATAGTGATCCTGGTCTTATGGTTCTGAGCTTTCGCACAATCTTTGATCTGGTAAAGAAGGATGACAGTAAAGATACGTTTGAGGTCTCATGTTCATATCTTGAAGTGTACAATGAGGTTATCTATGATTTGCTTGAAAAATCGTCAGGTCACCTGGAGCTTCGTGAAGATCCTGTGCATGGTATAATGGTTGCTGGTTTAAGAAGCATTAAGGTTCACTCAGCAGATAAGATTCTTGAACTCTTGAACATAGGCAACAGTCGGCGCAAGACAGAGAGCACAGAAGCAAACTCAACTTCTTCACGGTCACATGCTGTCCTGGAGATAACTGTGAAGCGAAAACAAAAAGGACAATATGGTAGTCAGGTTCTTCGTGGAAAGCTTGCGTTGGTTGACCTTGCGGGCAGTGAGAGGGCCTCTGAAACAAACAACTTTGGGCAAAAGCTTAGAGATGGAGCCAACATTAACCGTTCACTTCTAGCGCTAGCGAACTGCATCAATGCCCTTGGCAAGCAAAACAAGAAAGGTCTTGCATATGTTCCATATCGAAACAGCAAATTAACACGAATCCTGAAGGATGGGCTCTCTGGTAACTCTCGTACTGTTATGGTTGCTACGATATCACCAGCTGATGATCAGTATCATCACACCACCAATACACTCAAGTATGCTGATCGTGCAAAGGAGATAAAAACACATGTCCATAAAAACATTGGACATCTTGACACCCATGTTGAAGACTACAAAAGGATGATTGACAATCTCCAGGTTGAGGTTTCTCAGTTGAAGAAGGAATTAGCTGAGAAGGAGCATCAGTTAAGTGTAAAACCTACTGAAAAAGCTGCAGACAATGAGCTATCTTGGCTAAATATCTTGAGCCAGGAAACTGGCGAGAATGTTCAAGAACGCATTAATCTGCAGAAAGCACTGTTTGAACTTGAAGAAACCAATAAGCGCAATCGAATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTGAAAGATAAGGATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCGACAATGATGAAGCTGGTGCTGGCTACAGAAAGGATATTGAACTGAATGAGAGTCGCAAACGTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCCACATTCTCAGTCAGTACAGACTTCTTGGGATGACTAATGCCGAGCTTCAAATTGAGATGGCTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTATTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAACTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTTCACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATTCCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAACATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGTGCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTTCTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAACTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCTTGTACAAATAAAGGTAAACAGTCTTCCCTTATACACAAAAACAATGATTGGAAATCTGTAATGCACGTGGTCCCAAGTAGACATGGTTTTTCATGTAGTAAGAGAACCTAAAATGAAAAAGGAAGTAACATCAACTTAAATAAGCATAGCATTCCAAATGTGTTACTAGCGCACCAATTAAGGTAAAAAGAACAATGTTATCTCAAACAACAGAATATTTCAGAAGTGAAATTGCAACTTGTCTTAATCTGCAGGATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGGAAGGACATCATCAGCACTCTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATCTTCTGCCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTAGGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATGATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTTGAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGAATGCTGTAAGCATGTAAATCTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACA]




>consensus_5003#0
TGGCAATGCCGAGCATCCGAGCTCCGGCTTCCAAGCAGACGGCCACGCTACAGGTGGCTG
TGAAGTGCAGGCCACTGACAGACAGCGAGCAGCGGCGTTCGCGGCATATCATACAAGTCA
TTGATGATAAGAATGTCGTTGTGCTGGACCCTGATCTGTCCAAGGACTACCTTGAACTCA
TCCAAAACAGGACCAAGGAGAGAAGATACAGCTTCGATCATGTGTATGCGCCCGGGTGCT
CCAATGCGGATGTATATAAGAATATATCTTCTACAATTGCTGGTGTAGTTCAAGGCCTTA
ATGCGACAGTCTTTGCTTATGGTTCTACTGGAAGTGGGAAAACTTATACAATGGTTGGAA
CCCATAGTGATCCTGGTCTTATGGTTCTGAGCTTTCGCACAATCTTTGATCTGGTAAAGA
AGGATGACAGTAAAGATACGTTTGAGGTCTCATGTTCATATCTTGAAGTGTACAATGAGG
TTATCTATGATTTGCTTGAAAAATCGTCAGGTCACCTGGAGCTTCGTGAAGATCCTGTGC
ATGGTATAATGGTTGCTGGTTTAAGAAGCATTAAGGTTCACTCAGCAGATAAGATTCTTG
AACTCTTGAACATAGGCAACAGTCGGCGCAAGACAGAGAGCACAGAAGCAAACTCAACTT
CTTCACGGTCACATGCTGTCCTGGAGATAACTGTGAAGCGAAAACAAAAAGGACAATATG
GTAGTCAGGTTCTTCGTGGAAAGCTTGCGTTGGTTGACCTTGCGGGCAGTGAGAGGGCCT
CTGAAACAAACAACTTTGGGCAAAAGCTTAGAGATGGAGCCAACATTAACCGTTCACTTC
TAGCGCTAGCGAACTGCATCAATGCCCTTGGCAAGCAAAACAAGAAAGGTCTTGCATATG
TTCCATATCGAAACAGCAAATTAACACGAATCCTGAAGGATGGGCTCTCTGGTAACTCTC
GTACTGTTATGGTTGCTACGATATCACCAGCTGATGATCAGTATCATCACACCACCAATA
CACTCAAGTATGCTGATCGTGCAAAGGAGATAAAAACACATGTCCATAAAAACATTGGAC
ATCTTGACACCCATGTTGAAGACTACAAAAGGATGATTGACAATCTCCAGGTTGAGGTTT
CTCAGTTGAAGAAGGAATTAGCTGAGAAGGAGCATCAGTTAAGTGTAAAACCTACTGAAA
AAGCTGCAGACAATGAGCTATCTTGGCTAAATATCTTGAGCCAGGAAACTGGCGAGAATG
TTCAAGAACGCATTAATCTGCAGAAAGCACTGTTTGAACTTGAAGAAACCAATAAGCGCA
ATCGAATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTGAAAGATAAGG
ATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCG
ACAATGATGAAGCTGGTGCTGGCTACAGAAAGGATATTGAACTGAATGAGAGTCGCAAAC
GTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCC
ACATTCTCAGTCAGTACAGACTTCTTGGGATGACTAATGCCGAGCTTCAAATTGAGATGG
CTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTA
TTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAA
CTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTT
CACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATT
CCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAAC
ATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGT
GCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTT
CTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAA
CTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCTTGTACAAA
TAAAGGTAAACAGTCTTCCCTTATACACAAAAACAATGATTGGAAATCTGTAATGCACGT
GGTCCCAAGTAGACATGGTTTTTCATGTAGTAAGAGAACCTAAAATGAAAAAGGAAGTAA
CATCAACTTAAATAAGCATAGCATTCCAAATGTGTTACTAGCGCACCAATTAAGGTAAAA
AGAACAATGTTATCTCAAACAACAGAATATTTCAGAAGTGAAATTGCAACTTGTCTTAAT
CTGCAGGATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGGAAGGACATCATCAGCACT
CTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATCTTCTG
CCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTA
GGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATG
ATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTT
GAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGAATGC
TGTAAGCATGTAAATCTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACA

consensusID : consensus_5003#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1320
fasta sequence 
                              [TGAACTTGAAGAAACCAATAAGCGCAATCGAATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTGAAAGATAAGGATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCGACAATGATGAAGCTGGTGCTGGCTACAGAAAGGATATTGAACTGAATGAGAGTCGCAAACGTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCCACATTCTCAGTCAGTACAGACTTCTTGGGATGACTAATGCCGAGCTTCAAATTGAGATGGCTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTATTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAACTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTTCACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATTCCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAACATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGTGCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTTCTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAACTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCTTGTACAAATAAAGGATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGGAAGGACATCATCAGCACTCTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATCTTCTGCCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTAGGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATGATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTTGAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGAATGCTGTAAGCATGTAAATCTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACAGAATTATTCCAAGATCGGTCTCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK059632             [TGAACTTGAAGAAACCAATAAGCGCAATCGAATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTGAAAGATAAGGATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCGACAATGATGAAGCTGGTGCTGGCTACAGAAAGGATATTGAACTGAATGAGAGTCGCAAACGTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCCACATTCTCAGTCAGTACAGACTTCTTGGGATGACTAATGCCGAGCTTCAAATTGAGATGGCTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTATTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAACTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTTCACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATTCCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAACATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGTGCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTTCTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAACTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCTTGTACAAATAAAGGATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGGAAGGACATCATCAGCACTCTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATCTTCTGCCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTAGGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATGATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTTGAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGAATGCTGTAAGCATGTAAATCTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACA                                        ]
[-] EMBL CA760593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGTGCTCGCCTTTTGATGGTGATGGAAACCAGAAGNCAAATGGAAGGTCAATGCCATACTTTTCTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAACTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCGTGTACAAATAAAGGATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGAAAGGACATCATCAGCACTCTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATTTTTTGCCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTAGGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATGATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTTGAGCTTTTTTTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGATTGCTGTAAGCATGTAAATTTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACAGAATTATTCCAAGATCGGTCTCAAAAAAAAAAAAAAAAAA]




>consensus_5003#1
TGAACTTGAAGAAACCAATAAGCGCAATCGAATGGAGCTCCAGCATCTTGATGATGCAAT
TGCAAGACAACAGGTGAAAGATAAGGATTCGGCTGTTCTGCAAGCATTAACATCACGGAG
ACAAGTTATTCTTGACAACATACGCGACAATGATGAAGCTGGTGCTGGCTACAGAAAGGA
TATTGAACTGAATGAGAGTCGCAAACGTCAACTCCAAGATATGATCGAGGAAGCCACCAG
TAACAATGGCAACAGAACCTACCTCCACATTCTCAGTCAGTACAGACTTCTTGGGATGAC
TAATGCCGAGCTTCAAATTGAGATGGCTATGAGGGATCAAGTAATATATAACCAGAGGGA
ATCTCTAAGGAGTCTGTGGAACATTATTTATGGAACAGGGCTAAACCAGAAACAGATTTC
TAAACTAGCTGCGAAGCAAGGCTTAACTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCC
TGATGTTACTACCCCACCTTCCTTTTCACCCCATGGAAGGCTATCACCATTCATGTCATT
TCCTAGCCCGCAATCACAGCCTTATTCCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAG
CACCATGTCTTATCTCAGAAATCAACATGAGACGCCTACAGTATGTAGGCAGGAGCACCT
CAGTTCTTACTACATGATGTCTGAGTGCTCGCCTTTTGATGGTGATGGAAAACAGAAGAC
AAATGGAAGGTCAATGCCATACTTTTCTACCCCGGGAAAACCAAAAGAAATGTATAACTT
TTCTCCTGGAACTGAAAGCGAGAGAACTCCCTGCAGTAAGGAATACCCCACCTCATATTC
TCGCAATGGAGATTCGCTTGTACAAATAAAGGATTCCTGGTATACAGAAGAAAGGCAGTG
AGGAAGGAAGGACATCATCAGCACTCTTCCATTGCACATTATCAGGCCGGACGTTTGCCA
CTGGAGCCCGTTCCTACATCTTCTGCCAACAGGCCCAACACCAATGTTACCCTGAGTTCA
TGAAAATGCTTCAGTTTAGATGTTAGGATATCAGCCAAAGCTGCGGCCATGAGGCCACGG
CCATTTTGATCTTGATGCCTCTATGATGAACCCCAAGATGGCTCACTCCACCCTGTACAG
TAGCTGTTAGTCTCCAGTCTTTCTTGAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTA
GGATGAATCCGATTTTTCAGAATGCTGTAAGCATGTAAATCTGCTGTGATTGTAACCCCT
TTGCACCCATCAAATCAACAGAATTATTCCAAGATCGGTCTCAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5003#0      TGGCAATGCCGAGCATCCGAGCTCCGGCTTCCAAGCAGACGGCCACGCTACAGGTGGCTG 60
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      TGAAGTGCAGGCCACTGACAGACAGCGAGCAGCGGCGTTCGCGGCATATCATACAAGTCA 120
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      TTGATGATAAGAATGTCGTTGTGCTGGACCCTGATCTGTCCAAGGACTACCTTGAACTCA 180
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      TCCAAAACAGGACCAAGGAGAGAAGATACAGCTTCGATCATGTGTATGCGCCCGGGTGCT 240
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      CCAATGCGGATGTATATAAGAATATATCTTCTACAATTGCTGGTGTAGTTCAAGGCCTTA 300
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      ATGCGACAGTCTTTGCTTATGGTTCTACTGGAAGTGGGAAAACTTATACAATGGTTGGAA 360
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      CCCATAGTGATCCTGGTCTTATGGTTCTGAGCTTTCGCACAATCTTTGATCTGGTAAAGA 420
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      AGGATGACAGTAAAGATACGTTTGAGGTCTCATGTTCATATCTTGAAGTGTACAATGAGG 480
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      TTATCTATGATTTGCTTGAAAAATCGTCAGGTCACCTGGAGCTTCGTGAAGATCCTGTGC 540
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      ATGGTATAATGGTTGCTGGTTTAAGAAGCATTAAGGTTCACTCAGCAGATAAGATTCTTG 600
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      AACTCTTGAACATAGGCAACAGTCGGCGCAAGACAGAGAGCACAGAAGCAAACTCAACTT 660
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      CTTCACGGTCACATGCTGTCCTGGAGATAACTGTGAAGCGAAAACAAAAAGGACAATATG 720
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      GTAGTCAGGTTCTTCGTGGAAAGCTTGCGTTGGTTGACCTTGCGGGCAGTGAGAGGGCCT 780
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      CTGAAACAAACAACTTTGGGCAAAAGCTTAGAGATGGAGCCAACATTAACCGTTCACTTC 840
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      TAGCGCTAGCGAACTGCATCAATGCCCTTGGCAAGCAAAACAAGAAAGGTCTTGCATATG 900
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      TTCCATATCGAAACAGCAAATTAACACGAATCCTGAAGGATGGGCTCTCTGGTAACTCTC 960
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      GTACTGTTATGGTTGCTACGATATCACCAGCTGATGATCAGTATCATCACACCACCAATA 1020
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      CACTCAAGTATGCTGATCGTGCAAAGGAGATAAAAACACATGTCCATAAAAACATTGGAC 1080
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      ATCTTGACACCCATGTTGAAGACTACAAAAGGATGATTGACAATCTCCAGGTTGAGGTTT 1140
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      CTCAGTTGAAGAAGGAATTAGCTGAGAAGGAGCATCAGTTAAGTGTAAAACCTACTGAAA 1200
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      AAGCTGCAGACAATGAGCTATCTTGGCTAAATATCTTGAGCCAGGAAACTGGCGAGAATG 1260
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      TTCAAGAACGCATTAATCTGCAGAAAGCACTGTTTGAACTTGAAGAAACCAATAAGCGCA 1320
consensus_5003#1      ----------------------------------TGAACTTGAAGAAACCAATAAGCGCA 26
                                                        **************************

consensus_5003#0      ATCGAATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTGAAAGATAAGG 1380
consensus_5003#1      ATCGAATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTGAAAGATAAGG 86
                      ************************************************************

consensus_5003#0      ATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCG 1440
consensus_5003#1      ATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCG 146
                      ************************************************************

consensus_5003#0      ACAATGATGAAGCTGGTGCTGGCTACAGAAAGGATATTGAACTGAATGAGAGTCGCAAAC 1500
consensus_5003#1      ACAATGATGAAGCTGGTGCTGGCTACAGAAAGGATATTGAACTGAATGAGAGTCGCAAAC 206
                      ************************************************************

consensus_5003#0      GTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCC 1560
consensus_5003#1      GTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCC 266
                      ************************************************************

consensus_5003#0      ACATTCTCAGTCAGTACAGACTTCTTGGGATGACTAATGCCGAGCTTCAAATTGAGATGG 1620
consensus_5003#1      ACATTCTCAGTCAGTACAGACTTCTTGGGATGACTAATGCCGAGCTTCAAATTGAGATGG 326
                      ************************************************************

consensus_5003#0      CTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTA 1680
consensus_5003#1      CTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTA 386
                      ************************************************************

consensus_5003#0      TTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAA 1740
consensus_5003#1      TTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAA 446
                      ************************************************************

consensus_5003#0      CTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTT 1800
consensus_5003#1      CTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTT 506
                      ************************************************************

consensus_5003#0      CACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATT 1860
consensus_5003#1      CACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATT 566
                      ************************************************************

consensus_5003#0      CCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAAC 1920
consensus_5003#1      CCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAAC 626
                      ************************************************************

consensus_5003#0      ATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGT 1980
consensus_5003#1      ATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGT 686
                      ************************************************************

consensus_5003#0      GCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTT 2040
consensus_5003#1      GCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTT 746
                      ************************************************************

consensus_5003#0      CTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAA 2100
consensus_5003#1      CTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAA 806
                      ************************************************************

consensus_5003#0      CTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCTTGTACAAA 2160
consensus_5003#1      CTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCTTGTACAAA 866
                      ************************************************************

consensus_5003#0      TAAAGGTAAACAGTCTTCCCTTATACACAAAAACAATGATTGGAAATCTGTAATGCACGT 2220
consensus_5003#1      TAAAGG------------------------------------------------------ 872
                      ******                                                      

consensus_5003#0      GGTCCCAAGTAGACATGGTTTTTCATGTAGTAAGAGAACCTAAAATGAAAAAGGAAGTAA 2280
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      CATCAACTTAAATAAGCATAGCATTCCAAATGTGTTACTAGCGCACCAATTAAGGTAAAA 2340
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      AGAACAATGTTATCTCAAACAACAGAATATTTCAGAAGTGAAATTGCAACTTGTCTTAAT 2400
consensus_5003#1      ------------------------------------------------------------
                                                                                  

consensus_5003#0      CTGCAGGATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGGAAGGACATCATCAGCACT 2460
consensus_5003#1      -------ATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGGAAGGACATCATCAGCACT 925
                             *****************************************************

consensus_5003#0      CTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATCTTCTG 2520
consensus_5003#1      CTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATCTTCTG 985
                      ************************************************************

consensus_5003#0      CCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTA 2580
consensus_5003#1      CCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTA 1045
                      ************************************************************

consensus_5003#0      GGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATG 2640
consensus_5003#1      GGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATG 1105
                      ************************************************************

consensus_5003#0      ATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTT 2700
consensus_5003#1      ATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTT 1165
                      ************************************************************

consensus_5003#0      GAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGAATGC 2760
consensus_5003#1      GAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGAATGC 1225
                      ************************************************************

consensus_5003#0      TGTAAGCATGTAAATCTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACA----- 2815
consensus_5003#1      TGTAAGCATGTAAATCTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACAGAATT 1285
                      *******************************************************     

consensus_5003#0      -----------------------------------
consensus_5003#1      ATTCCAAGATCGGTCTCAAAAAAAAAAAAAAAAAA 1320


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)