These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5013#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1688 fasta sequence [TCCCAACACGATAGCCCCTTGAGTGCTATAAATTCAGCCCCAGATTACAGCTGCATATGCTACACGCATTGTTAGTTTGCATGCAAGCTTGATCGATCAGCTTCAGAGTTTGGATCACCAAGAAGTTCAGAATCCTCCCAATTCGTTCTTCATTTGCAGCAGTAATTCATTATTCATCCACCAACATGTCTGCTAATCCCAACCAGTCGTTCGACGATTTCAACAAGCAAGCCTCCAGCAATTTCAACTCCTTCCTAGCCATCGTCGTCGTGCTTTCAGTGGTGAGCATTGCTGGATCAGTCGCCATTGTTTACCTCGTGTACAGATGTGTCAAGAAGAATGGCCTCCCGGCCGTCAACATCAACACCAACCCGACGGCGGCGGCGGCGATGTACGCCGTGGTGCCCGACTCCCAGATACGCGACGCCACCGTCGAGAGGTTTCTCAAAGAGATCGCCGGCGAGAAGCCCATCCGGTTCACGGCGCAGCAGCTGGCCGGATTCACGAACAACTACTCGGCCCGGCTCGGCGCCGGCGGCTTCGGCACCGTGTACAAGGGCATGCTCCCGAACGGCCTCACGGTCGCCGTGAAGCGCCTCCACGTCGGCGGCCATGGCGACGGGTGGTCGACGTCGCAGGAGCAGTTCATGGCGGAGGTGGGCAGCGTCGGGAGGACTCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGACGTGCGCGCGCTGGTGTACGAGTACATGGACAACGGGGCGCTCGACGCCTACCTGTTCGACCGGAGCCGCGCCGTCGCCGTCGCGACGCGGCGCGCCATCGCCGTCGGTGTCGCGAGGGGGCTCCGCTACCTCCACGAGGAGTGCCAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCCTGACGCCCAAGGTGGCCGACTTCGGGCTGGCGCGGCTGGCGAGCCGCGGCGACACGCACGTCTCGGTGTCCGGCATGCGCGGCACCCCGGGCTACGCCGCGCCGGAGATGTGGATGCAGGCGGGCGTGACCGAGAAGTGCGACGTGTACAGCTTCGGCGTGCTCCTGTTCGAGATTGTCCGCCGGCGGCGGAACCTCGACGACGGCGGCGCGCCGGGGAGCCAGCAGCAGTGGTTCCCGATGCTGGCGTGGAGCAAGCACGAGGCCGGACACCTCGCCGAGGCCATCGAGGGCTGCGACGCCATGGACAAGCAGGAGAGGGAGACGGTGGAGAGGATGTGCAAGGTGGCGTTCTGGTGCGTGCAGCAGCAGCCGGAGGCGAGGCCGCCGATGAGCGCCGTGGTGAGGATGCTGGAAGGGGAGGTGGACATCGACGCGCCGCCGGTGAACCCGTTCCAGCATTTGGTCGCGTCGCCGGCGGCTGCGCTTAGGTGGACAAGCACTACAGATTCAGCTGAAAGTGATAACTCATTGAGATCAGGGTCTCGTCAGTCTGCAGAGGTGATCATTCCAATTGGATCATTACATTGTTAAGAGCAGGTACAATAGCAGGCTATAATTCAGCTATAAACATATTTTAAATAGATAAAGGAAGAGTGAGAAGAGCAGTGGGTTACAGATCTGTAGCCAGCTGCAGCACGAACTCTAAGACGTAATGTGTGTATGACAGGTAGGACTGGGTATTAATAGTATAGTAAGCAA] [+] EMBL AK068992 [TCCCAACACGATAGCCCCTTGAGTGCTATAAATTCAGCCCCAGATTACAGCTGCATATGCTACACGCATTGTTAGTTTGCATGCAAGCTTGATCGATCAGCTTCAGAGTTTGGATCACCAAGAAGTTCAGAATCCTCCCAATTCGTTCTTCATTTGCAGCAGTAATTCATTATTCATCCACCAACATGTCTGCTAATCCCAACCAGTCGTTCGACGATTTCAACAAGCAAGCCTCCAGCAATTTCAACTCCTTCCTAGCCATCGTCGTCGTGCTTTCAGTGGTGAGCATTGCTGGATCAGTCGCCATTGTTTACCTCGTGTACAGATGTGTCAAGAAGAATGGCCTCCCGGCCGTCAACATCAACACCAACCCGACGGCGGCGGCGGCGATGTACGCCGTGGTGCCCGACTCCCAGATACGCGACGCCACCGTCGAGAGGTTTCTCAAAGAGATCGCCGGCGAGAAGCCCATCCGGTTCACGGCGCAGCAGCTGGCCGGATTCACGAACAACTACTCGGCCCGGCTCGGCGCCGGCGGCTTCGGCACCGTGTACAAGGGCATGCTCCCGAACGGCCTCACGGTCGCCGTGAAGCGCCTCCACGTCGGCGGCCATGGCGACGGGTGGTCGACGTCGCAGGAGCAGTTCATGGCGGAGGTGGGCAGCGTCGGGAGGACTCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGACGTGCGCGCGCTGGTGTACGAGTACATGGACAACGGGGCGCTCGACGCCTACCTGTTCGACCGGAGCCGCGCCGTCGCCGTCGCGACGCGGCGCGCCATCGCCGTCGGTGTCGCGAGGGGGCTCCGCTACCTCCACGAGGAGTGCCAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCCTGACGCCCAAGGTGGCCGACTTCGGGCTGGCGCGGCTGGCGAGCCGCGGCGACACGCACGTCTCGGTGTCCGGCATGCGCGGCACCCCGGGCTACGCCGCGCCGGAGATGTGGATGCAGGCGGGCGTGACCGAGAAGTGCGACGTGTACAGCTTCGGCGTGCTCCTGTTCGAGATTGTCCGCCGGCGGCGGAACCTCGACGACGGCGGCGCGCCGGGGAGCCAGCAGCAGTGGTTCCCGATGCTGGCGTGGAGCAAGCACGAGGCCGGACACCTCGCCGAGGCCATCGAGGGCTGCGACGCCATGGACAAGCAGGAGAGGGAGACGGTGGAGAGGATGTGCAAGGTGGCGTTCTGGTGCGTGCAGCAGCAGCCGGAGGCGAGGCCGCCGATGAGCGCCGTGGTGAGGATGCTGGAAGGGGAGGTGGACATCGACGCGCCGCCGGTGAACCCGTTCCAGCATTTGGTCGCGTCGCCGGCGGCTGCGCTTAGGTGGACAAGCACTACAGATTCAGCTGAAAGTGATAACTCATTGAGATCAGGGTCTCGTCAGTCTGCAGAGGTGATCATTCCAATTGGATCATTACATTGTTAAGAGCAGGTACAATAGCAGGCTATAATTCAGCTATAAACATATTTTAAATAGATAAAGGAAGAGTGAGAAGAGCAGTGGGTTACAGATCTGTAGCCAGCTGCAGCACGAACTCTAAGACGTAATGTGTGTATGACAGGTAGGACTGGGTATTAATAGTATAGTAAGCAA] consensusID : consensus_5013#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1515 fasta sequence [GGAAACCCAAATCGGCGGCGGCGGCGACGCGTCGAGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATCCGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCCGGCGGCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGGTGTGGCCGTCAAGGTGCTCCGCAGCGGCATGGGCAGGAGGTCCGAGGAGCAGTTCATGGCGGAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGCCGTGCGCACGCTGGTGTACGAGTTCATGGGCGACGGCGCGCTTGATGCCTACCTGTTCGACCGGACCCGCGCCGTCGGCGACAGCGACGGCCTCCGGTCTCCCCCGTCCTCTTCGCTCTGGGCTGAGGCCGCCGTGAGTCAAAATCGGCGGAAACCCAAATCGGCGGCGGCAGCAACGCGTCGGGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGCTGGCGGTGATGTGCGCCTGGTTGCGGCGGAGCGGGCTGCGGAAGACCGCGGCGGAGTGGCCATGGAGGGAGCAGCAGAACGACAAGCAAAAACTCGCCGCGGCAGCGGTGGCGAGGCGATGGAAGGAGGAGAAGTTGGCGGTGGCGGCGGCGAGCTCATGGAAGGCGCGCGAGGAGGAGAACGCATCGGGATCAGTGGCGGCAGGTAGGCTCGCGAGGAAGTGAGCATAGATGGCGGAGGCGGTGCCGGCGGGGGGATTGGAAGGCGGCGGCCGCAAGAAGAGCAGCGGCGAGGCGGGAGCAGGCTGGGGAGAGTGAGAGGCGCGCGACGGTCGGCATGGGGACAGCGCATAGGGAGTGGCGGCGCTCGGCCGGCAAGGGAGATGCCGCCTCCTGCTCCCGCATCGCCGTGCCGCCATGTCCTCCTCCCACGGGCCGCCGCCGTGGATGGGAGTGGTGGCGCTCGGCCTCGTCGTCGTCGTCGGCGCCTCCGAGCAAGGATAGGGCCGCTGCCGCCGCCGTGCTCCCCGATATGGATAGGGCCGCCCCAAGCCCGAGCGCCGCCTCTCCTGCCTCGCCCCGCCGAGCTCCGAGCCGGCCACCGCCCTTCACCACCGGCGTCCTCCTCCTCCTTCGCCGCCGCATCGACGGCTTGCCCCGCTGCTCCCTCCCGGCCGCCTCAGCGACGTCATCCCTGCGAGTGCGAGAGCAGAGCGAGAGGAAGGAAAGAGAAACAGAGAAAGAGAAAGGGGAAAGAGAGGGTGACGTGGATATATGACATGTGGGGCCCACGCTGACTCAGCCGCCACATAGACCAAAACCGGGGTCAAAACCACCGAGGGATTTTGGGTGACCAGTTTTGTATAGTTAGGGGACCTCGGTTGTCTGGTATTGCGGTTCAAGGACGTTTTCGTATCTCGGTGACAAGTTCAGGGACCTCCGGTGTAC] [+] EMBL AK109559 [GGAAACCCAAATCGGCGGCGGCGGCGACGCGTCGAGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATCCGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCCGGCGGCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGGTGTGGCCGTCAAGGTGCTCCGCAGCGGCATGGGCAGGAGGTCCGAGGAGCAGTTCATGGCGGAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGCCGTGCGCACGCTGGTGTACGAGTTCATGGGCGACGGCGCGCTTGATGCCTACCTGTTCGACCGGACCCGCGCCGTCGGCGACAGCGACGGCCTCCGGTCTCCCCCGTCCTCTTCGCTCTGGGCTGAGGCCGCCGTGAGTCAAAATCGGCGGAAACCCAAATCGGCGGCGGCAGCAACGCGTCGGGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGCTGGCGGTGATGTGCGCCTGGTTGCGGCGGAGCGGGCTGCGGAAGACCGCGGCGGAGTGGCCATGGAGGGAGCAGCAGAACGACAAGCAAAAACTCGCCGCGGCAGCGGTGGCGAGGCGATGGAAGGAGGAGAAGTTGGCGGTGGCGGCGGCGAGCTCATGGAAGGCGCGCGAGGAGGAGAACGCATCGGGATCAGTGGCGGCAGGTAGGCTCGCGAGGAAGTGAGCATAGATGGCGGAGGCGGTGCCGGCGGGGGGATTGGAAGGCGGCGGCCGCAAGAAGAGCAGCGGCGAGGCGGGAGCAGGCTGGGGAGAGTGAGAGGCGCGCGACGGTCGGCATGGGGACAGCGCATAGGGAGTGGCGGCGCTCGGCCGGCAAGGGAGATGCCGCCTCCTGCTCCCGCATCGCCGTGCCGCCATGTCCTCCTCCCACGGGCCGCCGCCGTGGATGGGAGTGGTGGCGCTCGGCCTCGTCGTCGTCGTCGGCGCCTCCGAGCAAGGATAGGGCCGCTGCCGCCGCCGTGCTCCCCGATATGGATAGGGCCGCCCCAAGCCCGAGCGCCGCCTCTCCTGCCTCGCCCCGCCGAGCTCCGAGCCGGCCACCGCCCTTCACCACCGGCGTCCTCCTCCTCCTTCGCCGCCGCATCGACGGCTTGCCCCGCTGCTCCCTCCCGGCCGCCTCAGCGACGTCATCCCTGCGAGTGCGAGAGCAGAGCGAGAGGAAGGAAAGAGAAACAGAGAAAGAGAAAGGGGAAAGAGAGGGTGACGTGGATATATGACATGTGGGGCCCACGCTGACTCAGCCGCCACATAGACCAAAACCGGGGTCAAAACCACCGAGGGATTTTGGGTGACCAGTTTTGTATAGTTAGGGGACCTCGGTTGTCTGGTATTGCGGTTCAAGGACGTTTTCGTATCTCGGTGACAAGTTCAGGGACCTCCGGTGTAC] consensusID : consensus_5013#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1437 fasta sequence [AGGCCGTCACTCTTCACATGCTTTCATCAAAACACCAAGATTACATCACCTGCTTCATGGCGTCGCCTGCCGTTTACGTGATTGCCACGATCATCTTCGTTGTGGCGTTCGCGGCGTTGCTGGTCAAGGTGTACCGGGGCGCCGAGAGCTGCGGCGCCGCGGTGGCCGCCGAGATGAAGGCGACGGCGCACTACGCCGTGGTGCCCGACGCCGCGATGCGGAGCGCGACGGTGGAGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATCCGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCCGGCGTCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGCCGTGGCCGTCAAGGTGCTCCGCGGCGGCATGGACAGGAGGAGGTCCGAGGAGCAGTTCATGGCGGAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTACGACGCCGCCGTGCGCGCGCTGGTGTACGAGTACATGGGCAACGGCGCGCTCGACGCCTACCTGTTCGACCTGAGCCGCGACGTCGGCGTCCCGGCGCGGCGCGCCATCGCCATCGGCGTCGCGCGGGGGCTCCGCTACCTCCACGAGGAGTGCGAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCATGACGCCCAAGGTGGCCGACTTCGGGCTGGCCCGGCTGGTGAACCGCGGCGACACGCACGTCTCCGTGTCCGGCATGCGCGGCACCCCCGGCTACGCCGCGCCGGAGACGTTGATGCAGTCCGGCGTGACGGAGAAGTGCGACGTGTACAGCTTCGGCATGCTCCTCCTCAAGATCGTCGGCCGGAGGAGGAACTTCGACGAGGCCGCGCCGGAGAGCCAGCAGTGGTGGCCGATGGAGGCGTGGGCCAGGTACGAGCGCGGCGAGTTGATGATGGTCGACGACGCCGCCGCCGCCATCAATCATCCGAGCGACGAGATCTGTAGTGGCAGCGACGGCGAGGCCGTGGTGACCGTGGCCGAGGCCGACGACGAGCGGCGGTGCAAGGAGGCGGTGGTGAGGATGTACCAGGTGGCGTTCTGGTGCGTGCAGCAGCGGCCGGAGGCGCGGCCGCCGATGGGCGCGGTGGTGAAGATGCTGGAGGGCGAGATGGACGTCGCGCCTCCGGTGAACCCGTTCCTGCATCTCATGGCGGCTCCGGCGCCGGTGCCGAATCCATGGGCGACGACGACGGCGAGCAGCGGAAACGCCGTCTCAGAAAACGTCGTTGTTTCTCACGGAAGTGACGGAATCGTCTCGCTTTGACTACTGAAATCTTTTGTCTGTGCGTGTGGGTCGCCACGACCTCGTTTCTTTGCATTCTACAAGTAGATTGTTTATC] [+] EMBL AK106343 [AGGCCGTCACTCTTCACATGCTTTCATCAAAACACCAAGATTACATCACCTGCTTCATGGCGTCGCCTGCCGTTTACGTGATTGCCACGATCATCTTCGTTGTGGCGTTCGCGGCGTTGCTGGTCAAGGTGTACCGGGGCGCCGAGAGCTGCGGCGCCGCGGTGGCCGCCGAGATGAAGGCGACGGCGCACTACGCCGTGGTGCCCGACGCCGCGATGCGGAGCGCGACGGTGGAGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATCCGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCCGGCGTCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGCCGTGGCCGTCAAGGTGCTCCGCGGCGGCATGGACAGGAGGAGGTCCGAGGAGCAGTTCATGGCGGAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTACGACGCCGCCGTGCGCGCGCTGGTGTACGAGTACATGGGCAACGGCGCGCTCGACGCCTACCTGTTCGACCTGAGCCGCGACGTCGGCGTCCCGGCGCGGCGCGCCATCGCCATCGGCGTCGCGCGGGGGCTCCGCTACCTCCACGAGGAGTGCGAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCATGACGCCCAAGGTGGCCGACTTCGGGCTGGCCCGGCTGGTGAACCGCGGCGACACGCACGTCTCCGTGTCCGGCATGCGCGGCACCCCCGGCTACGCCGCGCCGGAGACGTTGATGCAGTCCGGCGTGACGGAGAAGTGCGACGTGTACAGCTTCGGCATGCTCCTCCTCAAGATCGTCGGCCGGAGGAGGAACTTCGACGAGGCCGCGCCGGAGAGCCAGCAGTGGTGGCCGATGGAGGCGTGGGCCAGGTACGAGCGCGGCGAGTTGATGATGGTCGACGACGCCGCCGCCGCCATCAATCATCCGAGCGACGAGATCTGTAGTGGCAGCGACGGCGAGGCCGTGGTGACCGTGGCCGAGGCCGACGACGAGCGGCGGTGCAAGGAGGCGGTGGTGAGGATGTACCAGGTGGCGTTCTGGTGCGTGCAGCAGCGGCCGGAGGCGCGGCCGCCGATGGGCGCGGTGGTGAAGATGCTGGAGGGCGAGATGGACGTCGCGCCTCCGGTGAACCCGTTCCTGCATCTCATGGCGGCTCCGGCGCCGGTGCCGAATCCATGGGCGACGACGACGGCGAGCAGCGGAAACGCCGTCTCAGAAAACGTCGTTGTTTCTCACGGAAGTGACGGAATCGTCTCGCTTTGACTACTGAAATCTTTTGTCTGTGCGTGTGGGTCGCCACGACCTCGTTTCTTTGCATTCTACAAGTAGATTGTTTATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_5013#0 TCCCAACACGATAGCCCCTTGAGTGCTATAAATTCAGCCCCAGATTACAGCTGCATATGC 60 consensus_5013#2 ------------------------------------------------------------ consensus_5013#1 ------------------------------------------------------------ consensus_5013#0 TACACGCATTGTTAGTTTGCATGCAAGCTTGATCGATCAGCTTCAGAGTTTGGATCACCA 120 consensus_5013#2 ------------------------------------------------------------ consensus_5013#1 ------------------------------------------------------------ consensus_5013#0 AGAAGTTCAGAATCCTCCCAATTCGTTCTTCATTTGCAGCAGTAATTCATTATTCATCCA 180 consensus_5013#2 ------------------------------------------------------------ consensus_5013#1 ------------------------------------------------------------ consensus_5013#0 CCAACATGTCTGCTAATCCCAACCAGTCGTTCGACGATTTCAACAAG----CAAGCCTCC 236 consensus_5013#2 --------------AGGCC--GTCACTCTTCACATGCTTTCATCAAAACACCAAGATTAC 44 consensus_5013#1 ------------------------------------------------------------ consensus_5013#0 AGCAATTTCAACTCCTTCCTAGCCATCGTCGTCGTGCTTTCAGTGGTGAGCATTGCTGGA 296 consensus_5013#2 ATCACCTGCTTCATGGCGTCGCCTGCCGTTTACGTGATTGCCACGATCATCTTCGTTGTG 104 consensus_5013#1 ------------------------------------------------------------ consensus_5013#0 TCAGTCGC--CATTGTTTACCTCG-TGTACAGATGTGTCAAGAAGAATGGCCTCCCGGCC 353 consensus_5013#2 GCGTTCGCGGCGTTGCTGGTCAAGGTGTACCGGGGCGCCGAGAGCTGCGGCGCCGCGGTG 164 consensus_5013#1 ------------------------------------------------------------ consensus_5013#0 GTCAACATCAACACCAACCCGACGGCGGCGGCGGCGATGTACGCCGTGGTGCCCGACTCC 413 consensus_5013#2 GCCG---------CCGA---GATGAAGGCGACGGCGCACTACGCCGTGGTGCCCGACGCC 212 consensus_5013#1 -------GGAAACCCAAATCGGCGGCGGCGGCGACG-----CGTCGAGGAGG--AGCTCG 46 ** * * * **** ** ** ** ** ** * * * consensus_5013#0 CAGATACGCGACGCCACCGTCGAGAGGTTTCTCAAAGAGATCGCCGGCGAGAAGCCCATC 473 consensus_5013#2 GCGATGCGGAGCGCGACGGTGGAGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATC 272 consensus_5013#1 TGGTGGCAGTGGCCGAGGACGGCGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATC 106 * * * * * ****** ** ***** ** ************* consensus_5013#0 CGGTTCACGGCGCAGCAGCTGGCCGGATTCACGAACAACTACTCGGCCCGGCTCGGCGCC 533 consensus_5013#2 CGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCC 332 consensus_5013#1 CGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCC 166 ********* *** ****** ***** ****** * ********* ************ consensus_5013#0 GGCGGCTTCGGCACCGTGTACAAGGGCATGCTCCCGAACGGCCTCACGGTCGCCGTGAAG 593 consensus_5013#2 GGCGTCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGCCGTGGCCGTCAAG 392 consensus_5013#1 GGCGGCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGGTGTGGCCGTCAAG 226 **** ****** ** ****** *** ****** ********* ** ***** *** consensus_5013#0 CGCCTCCACGTCGGCGGCCATGGCGACGGGTGGTCGACGTCGCAGGAGCAGTTCATGGCG 653 consensus_5013#2 GTGCTCCGCGGCGGC----ATG--GACAGGAGG---AGGTCCGAGGAGCAGTTCATGGCG 443 consensus_5013#1 GTGCTCCGCAGCGGC----ATG--GGCAGGAGG------TCCGAGGAGCAGTTCATGGCG 274 **** * **** *** * * ** ** ** ***************** consensus_5013#0 GAGGTGGGCAGCGTCGGGAGGACTCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGC 713 consensus_5013#2 GAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGC 503 consensus_5013#1 GAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGC 334 ********** * ********** ************************************ consensus_5013#0 TTCGACGCCGACGTGCGCGCGCTGGTGTACGAGTACATGGACAACGGGGCGCTCGACGCC 773 consensus_5013#2 TACGACGCCGCCGTGCGCGCGCTGGTGTACGAGTACATGGGCAACGGCGCGCTCGACGCC 563 consensus_5013#1 TTCGACGCCGCCGTGCGCACGCTGGTGTACGAGTTCATGGGCGACGGCGCGCTTGATGCC 394 * ******** ******* *************** ***** * **** ***** ** *** consensus_5013#0 TACCTGTTCGACCGGAGCCGCGCCGTCGCCGTC-GCGACG-CGGCGCGCCATCGCCGTCG 831 consensus_5013#2 TACCTGTTCGACCTGAGCCGCGACGTCGGCGTC-CCGGCG-CGGCGCGCCATCGCCATCG 621 consensus_5013#1 TACCTGTTCGACCGGACCCGCGCCGTCGGCGACAGCGACGGCCTCCGGTCTCCCCCGTCC 454 ************* ** ***** ***** ** * ** ** * * * * * ** ** consensus_5013#0 GTGTCGCGAGGGGGCTCCGCTACCTC----CACGAGGAGTGCCAGCACAAGATCGTGCAC 887 consensus_5013#2 GCGTCGCGCGGGGGCTCCGCTACCTC----CACGAGGAGTGCGAGCACAAGATCGTGCAC 677 consensus_5013#1 TCTTCGCTCTGGGCTGAGGCCGCCGTGAGTCAAAATCGGCGGAAACCCAA-ATCGGCGGC 513 **** *** ** ** ** * * * * * *** **** * consensus_5013#0 TACGACATCAAGCCCGGCAACGTCCTGCT-CGACGGCGGC--CTGACGCCCAAGGTGGC- 943 consensus_5013#2 TACGACATCAAGCCCGGCAACGTCCTGCT-CGACGGCGGC--ATGACGCCCAAGGTGGC- 733 consensus_5013#1 GGCAGCAACGCGTCGGGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGCTGGCG 573 * ** * * * ** * * * * * * *** **** * * * **** consensus_5013#0 -CGACTTCGGGCTGGC-GCGGCTG-GCGAGCCGCGGCGACACGCAC----GTCTCGGTGT 996 consensus_5013#2 -CGACTTCGGGCTGGC-CCGGCTG-GTGAACCGCGGCGACACGCAC----GTCTCCGTGT 786 consensus_5013#1 GTGATGTGCGCCTGGTTGCGGCGGAGCGGGCTGCGGAAGACCGCGGCGGAGTGGCCATGG 633 ** * * **** **** * * * * **** *** ** * ** consensus_5013#0 CCGGCATGCGCGGCACCCCGGGCTACGCCGCGCCGGAGATGTGGATGCAGGCGGGCGTGA 1056 consensus_5013#2 CCGGCATGCGCGGCACCCCCGGCTACGCCGCGCCGGAGACGTTGATGCAGTCCGGCGTGA 846 consensus_5013#1 AGGGAGCA-GCAGAACGACAAGCAAAAACTCGCCGCGGCAGCGGTGGC-----GAGGCGA 687 ** ** * ** * ** * * ***** * * * ** * * ** consensus_5013#0 CCGAGAAGTGCGACGTGTACAGCTTCGGCGTGCTCCTGTTCGAGATTGTCCGCCGGCGGC 1116 consensus_5013#2 CGGAGAAGTGCGACGTGTACAGCTTCGGCATGCTCCTCCTCAAGATCGTCGGCCGGAGGA 906 consensus_5013#1 TGGAAGGAGGAGAAGTTGGCGGTGGCGGCGGCGAGCTCATGGAAGGCGCGCGAGGAGGAG 747 ** * ** ** * * **** ** * * * * * * consensus_5013#0 GGAACCTCGACGACGGCGGCGCGCCGGGGAGCCAGCA--GCAGTGGTTCCCGATGCTGGC 1174 consensus_5013#2 GGAACTTCGACGA-GGC--CGCGCCGGAGAGCCAGCA--GTGGTGG---CCGATGGAGGC 958 consensus_5013#1 AACGCATCGGGATCAGTGGCG-GCAGGTAGGCTCGCGAGGAAGTGAGCATAGATGGCGGA 806 * *** * ** ** ** ** ** * *** **** ** consensus_5013#0 G-TGGAGCAAGCACGAG------------------GCCGGACACCTCGCCGAGGCCATCG 1215 consensus_5013#2 G-TGGGCCAGGTACGAGCGCGGCGAGTTGATGATGGTCGACGACGCCGCCGCCGCCATCA 1017 consensus_5013#1 GGCGGTGCCGGCGGGGGGATTGGAAGGCGGCGGCCGCAAGAAGAGCAGCGGCGAGGCGGG 866 * ** * * * * * ** * consensus_5013#0 AG------------------------------GGCTGCGACGCCATGG------------ 1233 consensus_5013#2 ATCATCCGAGCGACGAGATCTGTAGTGGCAGCGACGGCGAGGCCGTGGTGACCGTGGCCG 1077 consensus_5013#1 AGCAGGCTGGGGAGAGTGAGAGGCGCGCGACGGTCGGCATGGGGACAGCGCATA-----G 921 * * * ** * * consensus_5013#0 ---------ACAAGCAGGAG---AGGGAGACGGTGGAGAGGATGTGCAAGGTGGCGTTCT 1281 consensus_5013#2 AGGCCGACGACGAGCGGCGGTGCAAGGAGGCGGTGGTGAGGATGTACCAGGTGGCGTTCT 1137 consensus_5013#1 GGAGTGGCGGCGCTCGGCCGGCAAGGGAGATGCCGCCTCCTGCTCCCGCATCGCCGTGCC 981 * * * * * **** * * * * *** * consensus_5013#0 GGTGCGTGCAGCAGCAGCCGGAGGCGAGGCCGCCGATGAGCGCCGTGGTGAGGATGCTGG 1341 consensus_5013#2 GGTGCGTGCAGCAGCGGCCGGAGGCGCGGCCGCCGATGGGCGCGGTGGTGAAGATGCTGG 1197 consensus_5013#1 GCCATGTCCTCCTCCCAC--GGGCCGCCGCCGTGGATGGGAGTGGTGGCGCTCGGCCTCG 1039 * ** * * * * * * ** **** **** * * **** * ** * consensus_5013#0 AAGGGGAGGTGGACATCGACGCGCCGCCGGTGAACCCGTTCCAGCATTTGGTCGCGTCGC 1401 consensus_5013#2 AGGGCGAGATGGACGT---CGCGCCTCCGGTGAACCCGTTCCTGCATCTCATGGCGGCTC 1254 consensus_5013#1 TCGTCGTCGTCGGCGCCTCCGAGCAAG-GATAGGGCCGCTGCCGCCGCCGTGCTCCCCGA 1098 * * * * * ** ** * * *** * * ** * * consensus_5013#0 CGGCGGCTGCGCTTAG---GTGGACAAGCACTACAGATTCAGCTG-AAAGTGATAA-CTC 1456 consensus_5013#2 CGGCGCCGGTGCCGAATCCATGGGCGACGACGACGGCGAGCAGCG-GAAACGCCGT-CTC 1312 consensus_5013#1 TATGGATAGGGCCGCC-CCAAGCCCGAGCGCCGCCTCTCCTGCCTCGCCCCGCCGAGCTC 1157 * * ** * * * * * * *** consensus_5013#0 ATTGAG-ATCAGGGTCTCGTCAGTCTGCAGAGGTGATCATTCCAATTGG-------ATCA 1508 consensus_5013#2 AGAAAACGTCGTTGTTTC-TCACGGAAGTGACGGAATCGTCTCGCTTTG-------ACTA 1364 consensus_5013#1 CGAGCCGGCCACCGCCCT-TCACC--ACCGGCGTCCTCCTCCTCCTTCGCCGCCGCATCG 1214 * * *** * * ** * ** * * consensus_5013#0 TTACATTGTTAAGAGCAGGTACAATAGCAGGCTA---TAATTCAGCTATAAACATATTTT 1565 consensus_5013#2 CTGAAATCTTTTGTCTGTGCGTGTGGGTCGCCAC---GACCTCGTTTCTTTGCATTCTAC 1421 consensus_5013#1 ACGGCTTGCCCCGCTGCTCCCTCCCGGCCGCCTCAGCGACGTCATCCCTGCGAGTGCGAG 1274 * * * * * * ** * * consensus_5013#0 AAATAGATAAAGGAAGAGTGAGAAGAGCAGTGGGTTACAGATCTGTAGCCAGCTGCAGCA 1625 consensus_5013#2 AAGTAGATTGTTTATC-------------------------------------------- 1437 consensus_5013#1 AGCAGAGCGAGAGGAAGGAAAGAGAAACAGAGAAAGAGAAAGGGGAAAGAGAGGGTGACG 1334 * consensus_5013#0 CGAACTCTAAGACGTAATGTGTGTATGACAGGTAGGACTGGGTATTAATAGTATAGTAAG 1685 consensus_5013#2 ------------------------------------------------------------ consensus_5013#1 TGGA-TATATGACATGTGGGGCCCACGCTGACTCAGCCGCCACATAGACCAAAACCGGGG 1393 consensus_5013#0 CAA--------------------------------------------------------- 1688 consensus_5013#2 ------------------------------------------------------------ consensus_5013#1 TCAAAACCACCGAGGGATTTTGGGTGACCAGTTTTGTATAGTTAGGGGACCTCGGTTGTC 1453 consensus_5013#0 ------------------------------------------------------------ consensus_5013#2 ------------------------------------------------------------ consensus_5013#1 TGGTATTGCGGTTCAAGGACGTTTTCGTATCTCGGTGACAAGTTCAGGGACCTCCGGTGT 1513 consensus_5013#0 -- consensus_5013#2 -- consensus_5013#1 AC 1515 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||