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Oryza sativa
cluster # 5029 cluster # 5029       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5029#0 length = 1191 sequences # 3  

consensusID : consensus_5029#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1191
fasta sequence
                              [AAAGCTCAGCATCAAAGCGGCGTCACCGGTGAGGTCACGCGCCACCGGCGAATAAACAATAGCCGGCCGGCACGACGTCGATTTCTGAACCCTCTCTTTCGCAGAAATCCTGGGCGCCTCTCTGTCAGTTTCTCCACTACACTGTGCGCGTCTCTGCTTCAGTGGGGGTGGTCTTTGTGAAGCGGACTTGAAGGATCGGAGGTGTTCCATGGCAAGCTCGCAGTGCTGGGAGAACCCGCCGGCGCTGGACCCGGCCGGCGGAGGGGGCGAGGTCGTCGGCGACTTCGGCGGGCAGAAGGCGTACGTCGCTGGCTCGGCCGGCTCCAAGGCCGCCGTCGTCCTCATCTCCGACGCCTTTGGCTTTGAAGCCCCAAACCTGAGGAAGATAGCAGACAAGGTTGCTTTGTTTGGTTACTTCGTTGTGGTGCCAGATTTCCTTCATGGGGACCCATACCAGCCAGACAATCCCAACAATCCTGGAATTTGGTTACAGTCACATAATCCGAAAGAGGCATTTGAAGAGGCAAAACCAGTTATTGCCGCTCTAAAGGAGAAGGGAGCATCTTTCATCGGGGCTGCAGGTTATTGTTGGGGTGCAAAGGTAGTGGTGGAGTTAGGCAAAGTCCATGAAATCCAGGCTGCTGTATTGCTACACCCTTCTTTACTTGCTGTCGATGACATCAAAGAAGTCAAATGCCCAATTTCTATACTTGGTGCTGAAATTGACAAGACGTCTCCACCAGAGCTGTTAAAGCAGTTTGAGCAGATCCTTTCTCCTAACCCCGAGATTGCTCACTTCGTCAAGATTTTCCCCGGCGTAGAGCATGGATGGGCTGTGAGATACAATCACGATGATGCAGCTGCCGTCAAGAGCGCTGAGGAAGCCCTGGAAGACATGATGGATTGGTTCAAGAAATACCTGAAGTAAAATCTGAATTAGCAGCTCTCCATGTACCAAGATATTGCTAAGTGCTAGCTAATGCACGAACAGCTGATCTTGATATGCCATTTTGGGCCTGAACTTCGTTTATGCCATTGTGTTGTAATGGCGTGTGTGCTTCCGTTCCATGTGCCTCATGATACTTACTTTTAGTACTATTTCTGAACATGTGTGTGAGGTTGATCCAATCCTGCACCAACAAACCTGAAATTTTTGCTGTGCATTGGAGTTGATTTTCCAGCAATGAAATT]

[+] EMBL AU166755             [AAAGCTCAGCATCAAAGCGGCGTCACCGGTGAGGTCACGCGCCACCGGCGAATAAACAATAGCCGGCCGGCACGACGTCGATTTCTGAACCCTCTCTTTCGCAGAAATCCTGGGCGCCTCTCTGTCAGTTTCTCCACTACACTGTGCGCGTCTCTGCTTCAGTGGGGGTGGTCTTTGTGAAGCGGACTTGAAGGATCGGAGGTGTTCCATGGCAAGCTCGCAGTGCTGGGAGAACCCGCCGGCGCTGGACCCGGCCGGCGGAGGGGGCGAGGTCGTCGGCGACTTCGGCGGGCAGAAGGCGTACGTCGCTGGCTCGGCCGGCTCCAAGGCCGCCGTCGTCCTCATCTCCGACGCCTTTGGCTTTGAAGCCCCAAACCTGAGGAAGATAGCAGACAAGGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK101507             [                                                                                                                                                                           TCTTTGTGAAGCGGACTTGAAGGATCGGAGGTGTTCCATGGCAAGCTCGCAGTGCTGGGAGAACCCGCCGGCGCTGGACCCGGCCGGCGGAGGGGGCGAGGTCGTCGGCGACTTCGGCGGGCAGAAGGCGTACGTCGCTGGCTCGGCCGGCTCCAAGGCCGCCGTCGTCCTCATCTCCGACGCCTTTGGCTTTGAAGCCCCAAACCTGAGGAAGATAGCAGACAAGGTTGCTTTGTTTGGTTACTTCGTTGTGGTGCCAGATTTCCTTCATGGGGACCCATACCAGCCAGACAATCCCAACAATCCTGGAATTTGGTTACAGTCACATAATCCGAAAGAGGCATTTGAAGAGGCAAAACCAGTTATTGCCGCTCTAAAGGAGAAGGGAGCATCTTTCATCGGGGCTGCAGGTTATTGTTGGGGTGCAAAGGTAGTGGTGGAGTTAGGCAAAGTCCATGAAATCCAGGCTGCTGTATTGCTACACCCTTCTTTACTTGCTGTCGATGACATCAAAGAAGTCAAATGCCCAATTTCTATACTTGGTGCTGAAATTGACAAGACGTCTCCACCAGAGCTGTTAAAGCAGTTTGAGCAGATCCTTTCTCCTAACCCCGAGATTGCTCACTTCGTCAAGATTTTCCCCGGCGTAGAGCATGGATGGGCTGTGAGATACAATCACGATGATGCAGCTGCCGTCAAGAGCGCTGAGGAAGCCCTGGAAGACATGATGGATTGGTTCAAGAAATACCTGAAGTAAAATCTGAATTAGCAGCTCTCCATGTACCAAGATATTGCTAAGTGCTAGCTAATGCACGAACAGCTGATCTTGATATGCCATTTTGGGCCTGAACTTCGTTTATGCCATTGTGTTGTAATGGCGTGTGTGCTTCCGTTCCATGTGCCTCATGATACTTACTTTTAGTACTATTTCTGAACATGTGTGTGAGGTTGATCCAATCCTGCACCAACAAACCTGAAATTTTTGCTGTGCATTGGAGTTGATTTTCCAGCAATGAAATT]
[+] EMBL AU166756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGCCCAATTTCTATACTTGGTGCTGAAATTGACAAGACGTCTCCACCAGAGCTGTTAAAGCAGTTTGAGCAGATCCTTTCTCCTAACCCCGAGATTGCTCACTTCGTCAAGATTTTCCCCGGCGTAGAGCATGGATGGGCTGTGAGATACAATCACGATGATGCAGCTGCCGTCAAGAGCGCTGAGGAAGCCCTGGAAGACATGATGGATTGGTTCAAGAAATACCTGAAGTAAAATCTGAATTAGCAGCTCTCCATGTACCAAGATATTGCTAAGTGCTAGCTAATGCACGAACAGCTGATCTTGATATGCCATTTTGGGCCTGAACTTCGTTTATGCCATTGTGTTGTAATGGCGTGTGTGCTTCCGTTCCATGTGCCTCATGATACTTACTTTTAGTACTATTTCTGAACATGTGTGTGAGGTTGATCCAAaaa                                                            ]


>consensus_5029#0 AAAGCTCAGCATCAAAGCGGCGTCACCGGTGAGGTCACGCGCCACCGGCGAATAAACAAT AGCCGGCCGGCACGACGTCGATTTCTGAACCCTCTCTTTCGCAGAAATCCTGGGCGCCTC TCTGTCAGTTTCTCCACTACACTGTGCGCGTCTCTGCTTCAGTGGGGGTGGTCTTTGTGA AGCGGACTTGAAGGATCGGAGGTGTTCCATGGCAAGCTCGCAGTGCTGGGAGAACCCGCC GGCGCTGGACCCGGCCGGCGGAGGGGGCGAGGTCGTCGGCGACTTCGGCGGGCAGAAGGC GTACGTCGCTGGCTCGGCCGGCTCCAAGGCCGCCGTCGTCCTCATCTCCGACGCCTTTGG CTTTGAAGCCCCAAACCTGAGGAAGATAGCAGACAAGGTTGCTTTGTTTGGTTACTTCGT TGTGGTGCCAGATTTCCTTCATGGGGACCCATACCAGCCAGACAATCCCAACAATCCTGG AATTTGGTTACAGTCACATAATCCGAAAGAGGCATTTGAAGAGGCAAAACCAGTTATTGC CGCTCTAAAGGAGAAGGGAGCATCTTTCATCGGGGCTGCAGGTTATTGTTGGGGTGCAAA GGTAGTGGTGGAGTTAGGCAAAGTCCATGAAATCCAGGCTGCTGTATTGCTACACCCTTC TTTACTTGCTGTCGATGACATCAAAGAAGTCAAATGCCCAATTTCTATACTTGGTGCTGA AATTGACAAGACGTCTCCACCAGAGCTGTTAAAGCAGTTTGAGCAGATCCTTTCTCCTAA CCCCGAGATTGCTCACTTCGTCAAGATTTTCCCCGGCGTAGAGCATGGATGGGCTGTGAG ATACAATCACGATGATGCAGCTGCCGTCAAGAGCGCTGAGGAAGCCCTGGAAGACATGAT GGATTGGTTCAAGAAATACCTGAAGTAAAATCTGAATTAGCAGCTCTCCATGTACCAAGA TATTGCTAAGTGCTAGCTAATGCACGAACAGCTGATCTTGATATGCCATTTTGGGCCTGA ACTTCGTTTATGCCATTGTGTTGTAATGGCGTGTGTGCTTCCGTTCCATGTGCCTCATGA TACTTACTTTTAGTACTATTTCTGAACATGTGTGTGAGGTTGATCCAATCCTGCACCAAC AAACCTGAAATTTTTGCTGTGCATTGGAGTTGATTTTCCAGCAATGAAATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)