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Oryza sativa
cluster # 5032 cluster # 5032       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5032#0 length = 3876 sequences # 2  
consensus_5032#1 length = 482 sequences # 1  

consensusID : consensus_5032#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3876
fasta sequence
                              [GGATAGGTAGCCTCTTCTCCCTCCTCACGCCGGAGTTTTCCCCGCACGCACCCACACCAAACCAAACTCTACTCGATCTCCACGGCCGTACACGATTTCCCCTCCCTGGAGCCAGCGCGATGGGGGCGGAGGCGGAGGAATCGCTAGATCATCCTGGATCTCTGTCGGGGATGTCGCCGGCGACCCCCGACGTTGCCTGGAAGCCGGCGGAGCGGCGGCGGCGGCGGTCGGAGGCCGACGCGGAGGGGTCTTCTTGCTGCTCCCTTTCCGCTGCTACGGCGGCGTGGGTTGGCGCCGGTAATGTGGAGAGTGACGACCCGTCTGTTCGTTCGGTCGCCGCCGGGGAGCAATCCCGCTCCGTGTCTCGGCCGGAGGAGGAGGAGGAGGAATGCGCGTCATGTACCCAGGATTCCACCGTCTCTCCGCCGGTGAGCGAATGCGGCGACAGGACTGCGCAGCAGGAACCCAGCACCCAGGAGTACACCGTCTCGCCACCGCCGGTGAGTGAGTGTGGCGACAAAGTTGTGCAGCAGGAATCCAGCAATCAGGAGTCCACCGTCTCGCCACCACCGGTGAGCGAATGCGGTGATAAGATTGCGCAGCAGGGATCCAGCACTCGGGAGTCCACCGTCTTGCTGCCGGTGAGTGAGTGCTGCAACAAGGTTGCCCAGCAGGAATCCAGCACCCAGGAGTCCACCGTCTCGCTGCCGGTGATCGAATGCGGCGACAAGGTCGCGCAGCAGGAATCCAGCACCCAGGAGTCGACCGTGTCACTGCCGTCGAGCGAGTGTGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGTCCACCGTGTCGCTGCCGTTGAGCGAGTGCGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGTCCACTGTCTCGCCGCCGGTCAGTGAATGTGGCGACAAGATTGCACGGCAGGAAGGTGCTGCCAGTGCGATCCCTACGCCGGAGAAAGTGGAGGCTACCCCTAGGAGACCCAGGAAGAGGTCAACGAAGGGGTTGACTCGATTCAAGATTATGAAAGATCACAAGGCGGCCCAGAGAACGGCAACACCCGTTGAAGTTAAGATCAAGAGGAAAGCTAAGGATAATGGTAGGCGGCCACTTGGTGATAAATCAGTGAGGAGGAAGTTGAATTTTGAAGGCGATGCGGTGGACTTTGAAGGCAATAGGGAGTTCAGCAGAGCCAAGCTGATGGAGGATTTGAGGTGCCTTGCCAAGGTTCATGGTCTGCGCGATGATCTGGGTGCAGGCAAGCGAAGCAAG-AAAGGGAAGAAAAGAAAAAAGATGACTGGAGAACATCAGGACAATGGCGAATCGGCCCTTGTGCCTTACCAGAAGGCCCCAGCTGCCACATCATCATCTGCGCTGGTTCCAATTCAGAATTCTACGCAACTTGCTATTGTACACCACAGAAATCACTTGAAGAACTTGCGGACAAAGGTTTTAGGCCTTGATGAGAAGACATTACAA--GTATAATGTTCTGAGGAAGTGGGATGAGACTGATAGTGAGAGTTTCGAAGGTGTAGACATTGGCAGCGGGCCTGAATG-GAATGAAACTCGGCGTCACTTCGAACATTACGTGGATGTGTTTATTGCTACTGTG-CATGGTTTATTGGGTCCCAGAAGATTTTCTGAATGGGGA-GGATCAGTAA-CT-GATTCT-GTTGT--GGGTACTTTCCTTACGCAAAATGTCGCTGAC-AA-TTTATCAAGCAATGCTTTTTT-GAACCTGGTGGC-AAAATTTCCTCCAACTAAGAGACATATTAATGCTGAAGCATGTTCAAATTTGTCTCTGTTGA-TAGATGACATGAGACGGAAA-TTGAATTTGAATGAA-CAAT-CTAATGGTACTGATTCTGGTAGTTCAGATTTTACAAAACCTGTCGATTTTGAGAAAGAGAATGGTTACAATGAGGAGGTAAAAGGTAATTATGGCCGAGACTACAGTACAATTATAGAGAATTTTATATCTATTATTGAGAAACATCATAAAGACATGTCTACGTGGGACAATGCACGCCTTGAGAACATGGTGAAGGATAAGTCTGGAACTCCAGTATGTTCCCATAGAACCTTGAGAAAGTTTATGGACACATTTGAGGAGAAAGACACTTCTCATTGGGATAAGTTACGGGAGGAAGCATATAGTAAGGGATACAAAATAAAGGGAACCGGAATAAGTGATTCTGCTGATTGGGAAGCTGTGCTACATGCACCAGCAGTTGAGATTGCAAATTCCATTGCAGTCAGGGGACAACATTATGTTATAGCATTGCGGATACAGGCTTTTCTCAAGCGTGTAAAGAAAGATCATGGAAATTTTGACCTGGATTGGCTTAGATATGTACCACGTGAAAGTGCAAAAAATTACCTCATCAGTATTCTGGGGCTTGGAGATAAAAGTGTTGACTGCATCCGTCTTTTGTCATTAAAGCATAAAGGTTTCCCGGTTGATGTCAATGTAGCTCGCATAGTCACAAGGCTAGGATGGGTCAAACTTCAACCCTTACCCTTTTCTGCAGAGTTCCATTTAGTTGGCTTGTATCCAATCATGCGTGATGTGCAGAAATATTTATGGCCTCGGTTGTGTACCATTTCTAAGGAAAAATTGTATGAACTACACTGCCTCATGATAACTTTTGGAAAGGCAATCTGCACAAAAGTAAGTCCAAATTGCAGGGCTTGCCCTTTCAGTGCGAAATGCAAATACTACAACAGTTCACTTGCCAGATTATCACTCCCTCCTGCAGAGGGGCATGGGCATGAATATGGTGAAGAGCAAGCAAGCACTGCTACTCCTGGAAGACTCTTGTTGTCAAATGATAGCCACATAGCAGGTTTTCAACAAGTATGTCAACCGCAAATCAAAATAAACATGCCTGCTGGAAGAGAATCCATCTATAAGTGTGAGCCCATTATTGAGATACCTCCAAGTCCAGAACATGAATATGAAGAATCACCTTATGAGCAAGAATTATATGAAGATGATCTTTGTGATATTGAAGATACCATACCAGAATTACAGTATGATTTTGAAATAGATCTGTGTTCACTAAAGCACACGGTGAATAATGGCTCTTGGACACCAAACTCTGGAAAAGACTTGGCCTTGATTAATTCACAGCATGCCTCTGTTCAAAACAAAAGGTTGAAAAACATAGGGCGTCTTAGAACAGAACACAACGCGTACGTCCTCCCAGATGATCATGCAATCTTGGAAGAGTTTGAAGATAGAGTTCCAGAAGATCCATGTCCTTATCTTCTAGTTGTTATTTCTTGTTCTGATGAACACACAGTGAAAGGCACAATTCTGATACCCTGTCGGACAGCAACCAGAGGAAACTTTCCATTGAATGGTACCTACTTTCAGGATCATGAGGTTTTTGCAGATCATTCATCTAGCCGTTCCCCGATTACCATCCCTAGAGAATGCATCTGGAACCTAGATAGATGCATTGTATATTTTGGCTCGTCGATACAATCGATCATGAAAGGTCAAACAAGGCAAGACATTGAGGACTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGAATACAAGATACCCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGAACGGAACAGGTGAAAATAGCCGGAAGAAGAAAAAGACATCACAAGAGGGGAAGAAGATTGATGACAAATCTTCCTTTGGCAAATTAGAAATTAACTGATATATATATATCACCATTAACAAAGTTGTGTACAAATTGTAGTTGGAAGGATGCTGATAGCCTCTGCTAGCTCTAGTGTATCATGTAGATCAGTAGATTTGCTTAGGGCGGCTGCATGAGTAAATATTTGGTTGA]

[+] EMBL AK071406             [GGATAGGTAGCCTCTTCTCCCTCCTCACGCCGGAGTTTTCCCCGCACGCACCCACACCAAACCAAACTCTACTCGATCTCCACGGCCGTACACGATTTCCCCTCCCTGGAGCCAGCGCGATGGGGGCGGAGGCGGAGGAATCGCTAGATCATCCTGGATCTCTGTCGGGGATGTCGCCGGCGACCCCCGACGTTGCCTGGAAGCCGGCGGAGCGGCGGCGGCGGCGGTCGGAGGCCGACGCGGAGGGGTCTTCTTGCTGCTCCCTTTCCGCTGCTACGGCGGCGTGGGTTGGCGCCGGTAATGTGGAGAGTGACGACCCGTCTGTTCGTTCGGTCGCCGCCGGGGAGCAATCCCGCTCCGTGTCTCGGCCGGAGGAGGAGGAGGAGGAATGCGCGTCATGTACCCAGGATTCCACCGTCTCTCCGCCGGTGAGCGAATGCGGCGACAGGACTGCGCAGCAGGAACCCAGCACCCAGGAGTACACCGTCTCGCCACCGCCGGTGAGTGAGTGTGGCGACAAAGTTGTGCAGCAGGAATCCAGCAATCAGGAGTCCACCGTCTCGCCACCACCGGTGAGCGAATGCGGTGATAAGATTGCGCAGCAGGGATCCAGCACTCGGGAGTCCACCGTCTTGCTGCCGGTGAGTGAGTGCTGCAACAAGGTTGCCCAGCAGGAATCCAGCACCCAGGAGTCCACCGTCTCGCTGCCGGTGATCGAATGCGGCGACAAGGTCGCGCAGCAGGAATCCAGCACCCAGGAGTCGACCGTGTCACTGCCGTCGAGCGAGTGTGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGTCCACCGTGTCGCTGCCGTTGAGCGAGTGCGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGTCCACTGTCTCGCCGCCGGTCAGTGAATGTGGCGACAAGATTGCACGGCAGGAAGGTGCTGCCAGTGCGATCCCTACGCCGGAGAAAGTGGAGGCTACCCCTAGGAGACCCAGGAAGAGGTCAACGAAGGGGTTGACTCGATTCAAGATTATGAAAGATCACAAGGCGGCCCAGAGAACGGCAACACCCGTTGAAGTTAAGATCAAGAGGAAAGCTAAGGATAATGGTAGGCGGCCACTTGGTGATAAATCAGTGAGGAGGAAGTTGAATTTTGAAGGCGATGCGGTGGACTTTGAAGGCAATAGGGAGTTCAGCAGAGCCAAGCTGATGGAGGATTTGAGGTGCCTTGCCAAGGTTCATGGTCTGCGCGATGATCTGGGTGCAGGCAAGCGAAGCAAG AAAGGGAAGAAAAGAAAAAAGATGACTGGAGAACATCAGGACAATGGCGAATCGGCCCTTGTGCCTTACCAGAAGGCCCCAGCTGCCACATCATCATCTGCGCTGGTTCCAATTCAGAATTCTACGCAACTTGCTATTGTACACCACAGAAATCACTTGAAGAACTTGCGGACAAAGGTTTTAGGCCTTGATGAGAAGACATTACAA  GTATAATGTTCTGAGGAAGTGGGATGAGACTGATAGTGAGAGTTTCGAAGGTGTAGACATTGGCAGCGGGCCTGAATG GAATGAAACTCGGCGTCACTTCGAACATTACGTGGATGTGTTTATTGCTACTGTG CATGGTTTATTGGGTCCCAGAAGATTTTCTGAATGGGGA GGATCAGTAA CT GATTCT GTTGT  GGGTACTTTCCTTACGCAAAATGTCGCTGAC AA TTTATCAAGCAATGCTTTTTT GAACCTGGTGGC AAAATTTCCTCCAACTAAGAGACATATTAATGCTGAAGCATGTTCAAATTTGTCTCTGTTGA TAGATGACATGAGACGGAAA TTGAATTTGAATGAA CAAT CTAATGGTACTGATTCTGGTAGTTCAGATTTTACAAAACCTGTCGATTTTGAGAAAGAGAATGGTTACAATGAGGAGGTAAAAGGTAATTATGGCCGAGACTACAGTACAATTATAGAGAATTTTATATCTATTATTGAGAAACATCATAAAGACATGTCTACGTGGGACAATGCACGCCTTGAGAACATGGTGAAGGATAAGTCTGGAACTCCAGTATGTTCCCATAGAACCTTGAGAAAGTTTATGGACACATTTGAGGAGAAAGACACTTCTCATTGGGATAAGTTACGGGAGGAAGCATATAGTAAGGGATACAAAATAAAGGGAACCGGAATAAGTGATTCTGCTGATTGGGAAGCTGTGCTACATGCACCAGCAGTTGAGATTGCAAATTCCATTGCAGTCAGGGGACAACATTATGTTATAGCATTGCGGATACAGGCTTTTCTCAAGCGTGTAAAGAAAGATCATGGAAATTTTGACCTGGATTGGCTTAGATATGTACCACGTGAAAGTGCAAAAAATTACCTCATCAGTATTCTGGGGCTTGGAGATAAAAGTGTTGACTGCATCCGTCTTTTGTCATTAAAGCATAAAGGTTTCCCGGTTGATGTCAATGTAGCTCGCATAGTCACAAGGCTAGGATGGGTCAAACTTCAACCCTTACCCTTTTCTGCAGAGTTCCATTTAGTTGGCTTGTATCCAATCATGCGTGATGTGCAGAAATATTTATGGCCTCGGTTGTGTACCATTTCTAAGGAAAAATTGTATGAACTACACTGCCTCATGATAACTTTTGGAAAGGCAATCTGCACAAAAGTAAGTCCAAATTGCAGGGCTTGCCCTTTCAGTGCGAAATGCAAATACTACAACAGTTCACTTGCCAGATTATCACTCCCTCCTGCAGAGGGGCATGGGCATGAATATGGTGAAGAGCAAGCAAGCACTGCTACTCCTGGAAGACTCTTGTTGTCAAATGATAGCCACATAGCAGGTTTTCAACAAGTATGTCAACCGCAAATCAAAATAAACATGCCTGCTGGAAGAGAATCCATCTATAAGTGTGAGCCCATTATTGAGATACCTCCAAGTCCAGAACATGAATATGAAGAATCACCTTATGAGCAAGAATTATATGAAGATGATCTTTGTGATATTGAAGATACCATACCAGAATTACAGTATGATTTTGAAATAGATCTGTGTTCACTAAAGCACACGGTGAATAATGGCTCTTGGACACCAAACTCTGGAAAAGACTTGGCCTTGATTAATTCACAGCATGCCTCTGTTCAAAACAAAAGGTTGAAAAACATAGGGCGTCTTAGAACAGAACACAACGCGTACGTCCTCCCAGATGATCATGCAATCTTGGAAGAGTTTGAAGATAGAGTTCCAGAAGATCCATGTCCTTATCTTCTAGTTGTTATTTCTTGTTCTGATGAACACACAGTGAAAGGCACAATTCTGATACCCTGTCGGACAGCAACCAGAGGAAACTTTCCATTGAATGGTACCTACTTTCAGGATCATGAGGTTTTTGCAGATCATTCATCTAGCCGTTCCCCGATTACCATCCCTAGAGAATGCATCTGGAACCTAGATAGATGCATTGTATATTTTGGCTCGTCGATACAATCGATCATGAAAGGTCAAACAAGGCAAGACATTGAGGACTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGAATACAAGATACCCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGAACGGAACAGGTGAAAATAGCCGGAAGAAGAAAAAGACATCACAAGAGGGGAAGAAGATTGATGACAAATCTTCCTTTGGCAAATTAGAAATTAACTGATATATATATATCACCATTAACAAAGTTGTGTACAAATTGTAGTTGGAAGGATGCTGATAGCCTCTGCTAGCTCTAGTGTATCATGTAGATCAGTAGATTTGCTTAGGGCGGCTGCATGAGTAAATATTTGGTTGA]
[+] EMBL AU056873             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCTGATGGAGGATTTGAGGTGCCTTGCCAAGGTTCATGGTCTGCGCGATGATCTGGGTGCAGGCAAGCGAA CAAGTAAAGGGAAGAAAAGAAAAAAGATGACTGGAGAACATCAGGACAATGGCGAATCGGCCCTTGTGCCTTACCAGAAGGCCCCAGCTGCCACATCATCATCTGCGCTGGTTCCAATTCAGAATTCTACGCAACTTGCTATTGTACACCACAGAAATCACTTGAAGAACTTGCGGACAAAGGTTTTAGGCCTTGATGAGAAGACATTACAAGTGTATAATGTTCTGAGGAAGTGGGATGAGACTGATAGTGAGAGTTTCGAAGGTGTAGACATTGGCAGCGGGCCTGAATGTGAATGAAACTCGGCGTCACTTCGAACATTACGTGGATGTGTTTATTGCTACTGTGCCATGGTTTATNGGGTCCCAGAAGATTTTCTGAATGGGGAGGGATCAGTAANCTGGATTCTGGTTGTTGGGGTACTTTCCTTACGCAAAATGTCGCTGACNAATTTTATCAAGCAATGCTTTTTTGGAANCTGGTGGCAAAAATTTCCTCCAACTAAGAGACATATTNATGCTGAAGCATGTTCAAATTTGGCTCTGTTNAGTAGATGACATGAGACGGAAATTTGGAATTGAATTAAGGAATNCTAAat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_5032#0 GGATAGGTAGCCTCTTCTCCCTCCTCACGCCGGAGTTTTCCCCGCACGCACCCACACCAA ACCAAACTCTACTCGATCTCCACGGCCGTACACGATTTCCCCTCCCTGGAGCCAGCGCGA TGGGGGCGGAGGCGGAGGAATCGCTAGATCATCCTGGATCTCTGTCGGGGATGTCGCCGG CGACCCCCGACGTTGCCTGGAAGCCGGCGGAGCGGCGGCGGCGGCGGTCGGAGGCCGACG CGGAGGGGTCTTCTTGCTGCTCCCTTTCCGCTGCTACGGCGGCGTGGGTTGGCGCCGGTA ATGTGGAGAGTGACGACCCGTCTGTTCGTTCGGTCGCCGCCGGGGAGCAATCCCGCTCCG TGTCTCGGCCGGAGGAGGAGGAGGAGGAATGCGCGTCATGTACCCAGGATTCCACCGTCT CTCCGCCGGTGAGCGAATGCGGCGACAGGACTGCGCAGCAGGAACCCAGCACCCAGGAGT ACACCGTCTCGCCACCGCCGGTGAGTGAGTGTGGCGACAAAGTTGTGCAGCAGGAATCCA GCAATCAGGAGTCCACCGTCTCGCCACCACCGGTGAGCGAATGCGGTGATAAGATTGCGC AGCAGGGATCCAGCACTCGGGAGTCCACCGTCTTGCTGCCGGTGAGTGAGTGCTGCAACA AGGTTGCCCAGCAGGAATCCAGCACCCAGGAGTCCACCGTCTCGCTGCCGGTGATCGAAT GCGGCGACAAGGTCGCGCAGCAGGAATCCAGCACCCAGGAGTCGACCGTGTCACTGCCGT CGAGCGAGTGTGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGTCCACCGTGT CGCTGCCGTTGAGCGAGTGCGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGT CCACTGTCTCGCCGCCGGTCAGTGAATGTGGCGACAAGATTGCACGGCAGGAAGGTGCTG CCAGTGCGATCCCTACGCCGGAGAAAGTGGAGGCTACCCCTAGGAGACCCAGGAAGAGGT CAACGAAGGGGTTGACTCGATTCAAGATTATGAAAGATCACAAGGCGGCCCAGAGAACGG CAACACCCGTTGAAGTTAAGATCAAGAGGAAAGCTAAGGATAATGGTAGGCGGCCACTTG GTGATAAATCAGTGAGGAGGAAGTTGAATTTTGAAGGCGATGCGGTGGACTTTGAAGGCA ATAGGGAGTTCAGCAGAGCCAAGCTGATGGAGGATTTGAGGTGCCTTGCCAAGGTTCATG GTCTGCGCGATGATCTGGGTGCAGGCAAGCGAAGCAAGAAAGGGAAGAAAAGAAAAAAGA TGACTGGAGAACATCAGGACAATGGCGAATCGGCCCTTGTGCCTTACCAGAAGGCCCCAG CTGCCACATCATCATCTGCGCTGGTTCCAATTCAGAATTCTACGCAACTTGCTATTGTAC ACCACAGAAATCACTTGAAGAACTTGCGGACAAAGGTTTTAGGCCTTGATGAGAAGACAT TACAAGTATAATGTTCTGAGGAAGTGGGATGAGACTGATAGTGAGAGTTTCGAAGGTGTA GACATTGGCAGCGGGCCTGAATGGAATGAAACTCGGCGTCACTTCGAACATTACGTGGAT GTGTTTATTGCTACTGTGCATGGTTTATTGGGTCCCAGAAGATTTTCTGAATGGGGAGGA TCAGTAACTGATTCTGTTGTGGGTACTTTCCTTACGCAAAATGTCGCTGACAATTTATCA AGCAATGCTTTTTTGAACCTGGTGGCAAAATTTCCTCCAACTAAGAGACATATTAATGCT GAAGCATGTTCAAATTTGTCTCTGTTGATAGATGACATGAGACGGAAATTGAATTTGAAT GAACAATCTAATGGTACTGATTCTGGTAGTTCAGATTTTACAAAACCTGTCGATTTTGAG AAAGAGAATGGTTACAATGAGGAGGTAAAAGGTAATTATGGCCGAGACTACAGTACAATT ATAGAGAATTTTATATCTATTATTGAGAAACATCATAAAGACATGTCTACGTGGGACAAT GCACGCCTTGAGAACATGGTGAAGGATAAGTCTGGAACTCCAGTATGTTCCCATAGAACC TTGAGAAAGTTTATGGACACATTTGAGGAGAAAGACACTTCTCATTGGGATAAGTTACGG GAGGAAGCATATAGTAAGGGATACAAAATAAAGGGAACCGGAATAAGTGATTCTGCTGAT TGGGAAGCTGTGCTACATGCACCAGCAGTTGAGATTGCAAATTCCATTGCAGTCAGGGGA CAACATTATGTTATAGCATTGCGGATACAGGCTTTTCTCAAGCGTGTAAAGAAAGATCAT GGAAATTTTGACCTGGATTGGCTTAGATATGTACCACGTGAAAGTGCAAAAAATTACCTC ATCAGTATTCTGGGGCTTGGAGATAAAAGTGTTGACTGCATCCGTCTTTTGTCATTAAAG CATAAAGGTTTCCCGGTTGATGTCAATGTAGCTCGCATAGTCACAAGGCTAGGATGGGTC AAACTTCAACCCTTACCCTTTTCTGCAGAGTTCCATTTAGTTGGCTTGTATCCAATCATG CGTGATGTGCAGAAATATTTATGGCCTCGGTTGTGTACCATTTCTAAGGAAAAATTGTAT GAACTACACTGCCTCATGATAACTTTTGGAAAGGCAATCTGCACAAAAGTAAGTCCAAAT TGCAGGGCTTGCCCTTTCAGTGCGAAATGCAAATACTACAACAGTTCACTTGCCAGATTA TCACTCCCTCCTGCAGAGGGGCATGGGCATGAATATGGTGAAGAGCAAGCAAGCACTGCT ACTCCTGGAAGACTCTTGTTGTCAAATGATAGCCACATAGCAGGTTTTCAACAAGTATGT CAACCGCAAATCAAAATAAACATGCCTGCTGGAAGAGAATCCATCTATAAGTGTGAGCCC ATTATTGAGATACCTCCAAGTCCAGAACATGAATATGAAGAATCACCTTATGAGCAAGAA TTATATGAAGATGATCTTTGTGATATTGAAGATACCATACCAGAATTACAGTATGATTTT GAAATAGATCTGTGTTCACTAAAGCACACGGTGAATAATGGCTCTTGGACACCAAACTCT GGAAAAGACTTGGCCTTGATTAATTCACAGCATGCCTCTGTTCAAAACAAAAGGTTGAAA AACATAGGGCGTCTTAGAACAGAACACAACGCGTACGTCCTCCCAGATGATCATGCAATC TTGGAAGAGTTTGAAGATAGAGTTCCAGAAGATCCATGTCCTTATCTTCTAGTTGTTATT TCTTGTTCTGATGAACACACAGTGAAAGGCACAATTCTGATACCCTGTCGGACAGCAACC AGAGGAAACTTTCCATTGAATGGTACCTACTTTCAGGATCATGAGGTTTTTGCAGATCAT TCATCTAGCCGTTCCCCGATTACCATCCCTAGAGAATGCATCTGGAACCTAGATAGATGC ATTGTATATTTTGGCTCGTCGATACAATCGATCATGAAAGGTCAAACAAGGCAAGACATT GAGGACTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGAATACAAGATAC CCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGAACGGAACAGGTGAAAAT AGCCGGAAGAAGAAAAAGACATCACAAGAGGGGAAGAAGATTGATGACAAATCTTCCTTT GGCAAATTAGAAATTAACTGATATATATATATCACCATTAACAAAGTTGTGTACAAATTG TAGTTGGAAGGATGCTGATAGCCTCTGCTAGCTCTAGTGTATCATGTAGATCAGTAGATT TGCTTAGGGCGGCTGCATGAGTAAATATTTGGTTGA



consensusID : consensus_5032#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 482
fasta sequence
                              [CGNATCCTTGAAAAGTTCACACAAGGCAAAGACATTNAGGCCTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGCATACAAGATACCCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGNACGGAACAGGTGAAAATAGCCGGAAGAAGAAAAAGNCATCACAAGAGGGGAAGAAGATTGATGACAAATCTTCCTTTGGCAAATTAGAAATTAACTGATATATATATATCACCATTNACAAAGTTGTGTACAAATTGTAGTTGGAAGGATGCTGATAGCCTCTGCTAGCTCTAGTGTATCATGTAGATCAGTAGATTTGCTTAGGGCGGCTGCATGAGTAAATATTTGGTTGAGATCTCTTCCACAATGCGCCTTGTATATTAGTCAAATTCCTTTTTTATTATGTGTAAACAAAACATCCCATCTTTTATGAGGCAAAATCGCACTATTTAGTCTTAAAAAA]

[+] EMBL AU056874             [CGNATCCTTGAAAAGTTCACACAAGGCAAAGACATTNAGGCCTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGCATACAAGATACCCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGNACGGAACAGGTGAAAATAGCCGGAAGAAGAAAAAGNCATCACAAGAGGGGAAGAAGATTGATGACAAATCTTCCTTTGGCAAATTAGAAATTAACTGATATATATATATCACCATTNACAAAGTTGTGTACAAATTGTAGTTGGAAGGATGCTGATAGCCTCTGCTAGCTCTAGTGTATCATGTAGATCAGTAGATTTGCTTAGGGCGGCTGCATGAGTAAATATTTGGTTGAGATCTCTTCCACAATGCGCCTTGTATATTAGTCAAATTCCTTTTTTATTATGTGTAAACAAAACATCCCATCTTTTATGAGGCAAAATCGCACTATTTAGTCTTAAAAAA]


>consensus_5032#1 CGNATCCTTGAAAAGTTCACACAAGGCAAAGACATTNAGGCCTGCTACAAGAAAGGATAT ATTTGTGTTAGAGGATTTGATCGGCATACAAGATACCCAAAGCCAATATGTGCAAAATTA CACGCCACCAATGAAAGGNACGGAACAGGTGAAAATAGCCGGAAGAAGAAAAAGNCATCA CAAGAGGGGAAGAAGATTGATGACAAATCTTCCTTTGGCAAATTAGAAATTAACTGATAT ATATATATCACCATTNACAAAGTTGTGTACAAATTGTAGTTGGAAGGATGCTGATAGCCT CTGCTAGCTCTAGTGTATCATGTAGATCAGTAGATTTGCTTAGGGCGGCTGCATGAGTAA ATATTTGGTTGAGATCTCTTCCACAATGCGCCTTGTATATTAGTCAAATTCCTTTTTTAT TATGTGTAAACAAAACATCCCATCTTTTATGAGGCAAAATCGCACTATTTAGTCTTAAAA AA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5032#0      GGATAGGTAGCCTCTTCTCCCTCCTCACGCCGGAGTTTTCCCCGCACGCACCCACACCAA 60
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ACCAAACTCTACTCGATCTCCACGGCCGTACACGATTTCCCCTCCCTGGAGCCAGCGCGA 120
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TGGGGGCGGAGGCGGAGGAATCGCTAGATCATCCTGGATCTCTGTCGGGGATGTCGCCGG 180
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CGACCCCCGACGTTGCCTGGAAGCCGGCGGAGCGGCGGCGGCGGCGGTCGGAGGCCGACG 240
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CGGAGGGGTCTTCTTGCTGCTCCCTTTCCGCTGCTACGGCGGCGTGGGTTGGCGCCGGTA 300
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ATGTGGAGAGTGACGACCCGTCTGTTCGTTCGGTCGCCGCCGGGGAGCAATCCCGCTCCG 360
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TGTCTCGGCCGGAGGAGGAGGAGGAGGAATGCGCGTCATGTACCCAGGATTCCACCGTCT 420
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CTCCGCCGGTGAGCGAATGCGGCGACAGGACTGCGCAGCAGGAACCCAGCACCCAGGAGT 480
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ACACCGTCTCGCCACCGCCGGTGAGTGAGTGTGGCGACAAAGTTGTGCAGCAGGAATCCA 540
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GCAATCAGGAGTCCACCGTCTCGCCACCACCGGTGAGCGAATGCGGTGATAAGATTGCGC 600
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      AGCAGGGATCCAGCACTCGGGAGTCCACCGTCTTGCTGCCGGTGAGTGAGTGCTGCAACA 660
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      AGGTTGCCCAGCAGGAATCCAGCACCCAGGAGTCCACCGTCTCGCTGCCGGTGATCGAAT 720
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GCGGCGACAAGGTCGCGCAGCAGGAATCCAGCACCCAGGAGTCGACCGTGTCACTGCCGT 780
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CGAGCGAGTGTGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGTCCACCGTGT 840
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CGCTGCCGTTGAGCGAGTGCGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGT 900
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CCACTGTCTCGCCGCCGGTCAGTGAATGTGGCGACAAGATTGCACGGCAGGAAGGTGCTG 960
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CCAGTGCGATCCCTACGCCGGAGAAAGTGGAGGCTACCCCTAGGAGACCCAGGAAGAGGT 1020
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CAACGAAGGGGTTGACTCGATTCAAGATTATGAAAGATCACAAGGCGGCCCAGAGAACGG 1080
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CAACACCCGTTGAAGTTAAGATCAAGAGGAAAGCTAAGGATAATGGTAGGCGGCCACTTG 1140
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GTGATAAATCAGTGAGGAGGAAGTTGAATTTTGAAGGCGATGCGGTGGACTTTGAAGGCA 1200
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ATAGGGAGTTCAGCAGAGCCAAGCTGATGGAGGATTTGAGGTGCCTTGCCAAGGTTCATG 1260
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GTCTGCGCGATGATCTGGGTGCAGGCAAGCGAAGCAAGAAAGGGAAGAAAAGAAAAAAGA 1320
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TGACTGGAGAACATCAGGACAATGGCGAATCGGCCCTTGTGCCTTACCAGAAGGCCCCAG 1380
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CTGCCACATCATCATCTGCGCTGGTTCCAATTCAGAATTCTACGCAACTTGCTATTGTAC 1440
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ACCACAGAAATCACTTGAAGAACTTGCGGACAAAGGTTTTAGGCCTTGATGAGAAGACAT 1500
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TACAAGTATAATGTTCTGAGGAAGTGGGATGAGACTGATAGTGAGAGTTTCGAAGGTGTA 1560
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GACATTGGCAGCGGGCCTGAATGGAATGAAACTCGGCGTCACTTCGAACATTACGTGGAT 1620
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GTGTTTATTGCTACTGTGCATGGTTTATTGGGTCCCAGAAGATTTTCTGAATGGGGAGGA 1680
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TCAGTAACTGATTCTGTTGTGGGTACTTTCCTTACGCAAAATGTCGCTGACAATTTATCA 1740
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      AGCAATGCTTTTTTGAACCTGGTGGCAAAATTTCCTCCAACTAAGAGACATATTAATGCT 1800
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GAAGCATGTTCAAATTTGTCTCTGTTGATAGATGACATGAGACGGAAATTGAATTTGAAT 1860
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GAACAATCTAATGGTACTGATTCTGGTAGTTCAGATTTTACAAAACCTGTCGATTTTGAG 1920
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      AAAGAGAATGGTTACAATGAGGAGGTAAAAGGTAATTATGGCCGAGACTACAGTACAATT 1980
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ATAGAGAATTTTATATCTATTATTGAGAAACATCATAAAGACATGTCTACGTGGGACAAT 2040
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GCACGCCTTGAGAACATGGTGAAGGATAAGTCTGGAACTCCAGTATGTTCCCATAGAACC 2100
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TTGAGAAAGTTTATGGACACATTTGAGGAGAAAGACACTTCTCATTGGGATAAGTTACGG 2160
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GAGGAAGCATATAGTAAGGGATACAAAATAAAGGGAACCGGAATAAGTGATTCTGCTGAT 2220
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TGGGAAGCTGTGCTACATGCACCAGCAGTTGAGATTGCAAATTCCATTGCAGTCAGGGGA 2280
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CAACATTATGTTATAGCATTGCGGATACAGGCTTTTCTCAAGCGTGTAAAGAAAGATCAT 2340
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GGAAATTTTGACCTGGATTGGCTTAGATATGTACCACGTGAAAGTGCAAAAAATTACCTC 2400
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ATCAGTATTCTGGGGCTTGGAGATAAAAGTGTTGACTGCATCCGTCTTTTGTCATTAAAG 2460
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CATAAAGGTTTCCCGGTTGATGTCAATGTAGCTCGCATAGTCACAAGGCTAGGATGGGTC 2520
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      AAACTTCAACCCTTACCCTTTTCTGCAGAGTTCCATTTAGTTGGCTTGTATCCAATCATG 2580
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CGTGATGTGCAGAAATATTTATGGCCTCGGTTGTGTACCATTTCTAAGGAAAAATTGTAT 2640
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GAACTACACTGCCTCATGATAACTTTTGGAAAGGCAATCTGCACAAAAGTAAGTCCAAAT 2700
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TGCAGGGCTTGCCCTTTCAGTGCGAAATGCAAATACTACAACAGTTCACTTGCCAGATTA 2760
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TCACTCCCTCCTGCAGAGGGGCATGGGCATGAATATGGTGAAGAGCAAGCAAGCACTGCT 2820
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ACTCCTGGAAGACTCTTGTTGTCAAATGATAGCCACATAGCAGGTTTTCAACAAGTATGT 2880
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      CAACCGCAAATCAAAATAAACATGCCTGCTGGAAGAGAATCCATCTATAAGTGTGAGCCC 2940
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ATTATTGAGATACCTCCAAGTCCAGAACATGAATATGAAGAATCACCTTATGAGCAAGAA 3000
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TTATATGAAGATGATCTTTGTGATATTGAAGATACCATACCAGAATTACAGTATGATTTT 3060
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GAAATAGATCTGTGTTCACTAAAGCACACGGTGAATAATGGCTCTTGGACACCAAACTCT 3120
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      GGAAAAGACTTGGCCTTGATTAATTCACAGCATGCCTCTGTTCAAAACAAAAGGTTGAAA 3180
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      AACATAGGGCGTCTTAGAACAGAACACAACGCGTACGTCCTCCCAGATGATCATGCAATC 3240
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TTGGAAGAGTTTGAAGATAGAGTTCCAGAAGATCCATGTCCTTATCTTCTAGTTGTTATT 3300
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TCTTGTTCTGATGAACACACAGTGAAAGGCACAATTCTGATACCCTGTCGGACAGCAACC 3360
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      AGAGGAAACTTTCCATTGAATGGTACCTACTTTCAGGATCATGAGGTTTTTGCAGATCAT 3420
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      TCATCTAGCCGTTCCCCGATTACCATCCCTAGAGAATGCATCTGGAACCTAGATAGATGC 3480
consensus_5032#1      ------------------------------------------------------------
                                                                                  

consensus_5032#0      ATTGTATATTTTGGCTCGTCGATACAATCGATCAT--GAAAGGTCAAACAAGGCAA-GAC 3537
consensus_5032#1      ---------------------------CGNATCCTTGAAAAGTTCACACAAGGCAAAGAC 33
                                                    *** *   **** *** ********* ***

consensus_5032#0      ATTGAGGACTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGAATACAAGA 3597
consensus_5032#1      ATTNAGGCCTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGCATACAAGA 93
                      *** *** ******************************************* ********

consensus_5032#0      TACCCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGAACGGAACAGGTGAA 3657
consensus_5032#1      TACCCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGNACGGAACAGGTGAA 153
                      ********************************************* **************

consensus_5032#0      AATAGCCGGAAGAAGAAAAAGACATCACAAGAGGGGAAGAAGATTGATGACAAATCTTCC 3717
consensus_5032#1      AATAGCCGGAAGAAGAAAAAGNCATCACAAGAGGGGAAGAAGATTGATGACAAATCTTCC 213
                      ********************* **************************************

consensus_5032#0      TTTGGCAAATTAGAAATTAACTGATATATATATATCACCATTAACAAAGTTGTGTACAAA 3777
consensus_5032#1      TTTGGCAAATTAGAAATTAACTGATATATATATATCACCATTNACAAAGTTGTGTACAAA 273
                      ****************************************** *****************

consensus_5032#0      TTGTAGTTGGAAGGATGCTGATAGCCTCTGCTAGCTCTAGTGTATCATGTAGATCAGTAG 3837
consensus_5032#1      TTGTAGTTGGAAGGATGCTGATAGCCTCTGCTAGCTCTAGTGTATCATGTAGATCAGTAG 333
                      ************************************************************

consensus_5032#0      ATTTGCTTAGGGCGGCTGCATGAGTAAATATTTGGTTGA--------------------- 3876
consensus_5032#1      ATTTGCTTAGGGCGGCTGCATGAGTAAATATTTGGTTGAGATCTCTTCCACAATGCGCCT 393
                      ***************************************                     

consensus_5032#0      ------------------------------------------------------------
consensus_5032#1      TGTATATTAGTCAAATTCCTTTTTTATTATGTGTAAACAAAACATCCCATCTTTTATGAG 453
                                                                                  

consensus_5032#0      -----------------------------
consensus_5032#1      GCAAAATCGCACTATTTAGTCTTAAAAAA 482
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)