cluster # 5049

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Oryza sativa
cluster # 5049 cluster # 5049 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5049#0 length = 1356 sequences # 3
consensusID : consensus_5049#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1356
fasta sequence
                              [TAGAGGAAGATTAGTAGTATTAGTAGTCGGGATTAGGCAGTAATGGCGGCGACGAGCGCCAGGAGCGTGGCGTGGCAATGGTTGGCCGTGGCGGCGGCGGTGGCGGCGGCGTCTCTGATCGGCGGCACGCCGGCGGAGGCGAGGGGGGAGGGAAGGAGTCCATCGGTTTCTACGAGCTGCGTCGGGGCGAGTTCTCCGTCGTCGTCACCAACTGGGGCGCCACCATCCTCACCGTCAACCTCCCCGACAAGAACGGGCACATTGATGACGTCGTTCTTGGCTACAAAGATATTGGATCTTACGTGAATGACACGACCTACTTCGGGGCGCTGGTGGGGCGGGTGGCGAACCGGATCGCCGGCGGGAGGTTCACGGTGAAGGGGCATGCGTTCCACACGTACAAGAACGACGGCAAGAACACGCTCCACGGCGGCCACCGCGGGTTCAACCAGGTGTTCTGGTCGGTCCGGGAGAGGGCCACCGGCCAC-TTCCCC-TACATCACCTTCTAC-TACC-GGAGCT-ACGACGGCGAGCAGGGC-TTCCC-GGGCGCCC-TCGACG-TGCTCG-TCACC-TACAAGA-TCGACGGCGACTACTCC-TTCAGCG-TCACCATGTACGCCCGCCCCGTCGACGACGGCAAGCCCACGCCGGTCAACCTCGCCCAGCACACCTACTGGGACCTCCGCGGCCACGGCAACGGCACCATCCTCGACCACTCCGTCCAGATCTTCGCGTCGGCGGTCACCCCCGTCGGCGCCGGCCTCATCCCCACGGGAGCCGTCTCGCCCGTCTCCGGCACGCCGTTCGACTTCCGCGCCCCCGCGCCGCCCGGCGCGCGCATCGCCGACGTCCCCGGCGGCGGGTACGACATCAACTACGTGCTCGACGGCGAGGCCGACGGGCAGGGCGTGCGCAAGGCGGCGGTGGTGAGCGAGCCCACCTCGGGGCGCGTGCTGGAGCTGTGGTCCGACCAGCCCGGGCTGCAGTTCTACACGGGCAACTTCCTCAAGGGCGACGAGGGCAAGGGCGGCGCGCGCTACGTGAAGCACGGCGGACTCTGCCTCGAGACGCAGGACTACCCGGACGCCGTCCACAACGCCAAGTTCCCCACCGAGATCTACCGCAAGGGCCAGGAGTACAAGCACTACATGCTCTACAAGTTCTCTCTCGCCAAGAAGTAGATTATTAAGACGTTCGTCGTAATCAAATCAAGAATTCAAGATAATTATTAGCCTACATGGTTTTTGTGAGCGATTATGTATCTTAGATTATGCTAGTAGTACACTTAGGTGATCGGTATGAAGCTTACGTGATTTTAGATGATGATTAACGTGCCAAATAATTCGCAAAAGAGAGCAGCACATG]

[+] EMBL AK069332             [TAGAGGAAGATTAGTAGTATTAGTAGTCGGGATTAGGCAGTAATGGCGGCGACGAGCGCCAGGAGCGTGGCGTGGCAATGGTTGGCCGTGGCGGCGGCGGTGGCGGCGGCGTCTCTGATCGGCGGCACGCCGGCGGAGGCGAGGGGGGAGGGAAGGAGTCCATCGGTTTCTACGAGCTGCGTCGGGGCGAGTTCTCCGTCGTCGTCACCAACTGGGGCGCCACCATCCTCACCGTCAACCTCCCCGACAAGAACGGGCACATTGATGACGTCGTTCTTGGCTACAAAGATATTGGATCTTACGTGAATGACACGACCTACTTCGGGGCGCTGGTGGGGCGGGTGGCGAACCGGATCGCCGGCGGGAGGTTCACGGTGAAGGGGCATGCGTTCCACACGTACAAGAACGACGGCAAGAACACGCTCCACGGCGGCCACCGCGGGTTCAACCAGGTGTTCTGGTCGGTCCGGGAGAGGGCCACCGGCCAC TTCCCC TACATCACCTTCTAC TACC GGAGCT ACGACGGCGAGCAGGGC TTCCC GGGCGCCC TCGACG TGCTCG TCACC TACAAGA TCGACGGCGACTACTCC TTCAGCG TCACCATGTACGCCCGCCCCGTCGACGACGGCAAGCCCACGCCGGTCAACCTCGCCCAGCACACCTACTGGGACCTCCGCGGCCACGGCAACGGCACCATCCTCGACCACTCCGTCCAGATCTTCGCGTCGGCGGTCACCCCCGTCGGCGCCGGCCTCATCCCCACGGGAGCCGTCTCGCCCGTCTCCGGCACGCCGTTCGACTTCCGCGCCCCCGCGCCGCCCGGCGCGCGCATCGCCGACGTCCCCGGCGGCGGGTACGACATCAACTACGTGCTCGACGGCGAGGCCGACGGGCAGGGCGTGCGCAAGGCGGCGGTGGTGAGCGAGCCCACCTCGGGGCGCGTGCTGGAGCTGTGGTCCGACCAGCCCGGGCTGCAGTTCTACACGGGCAACTTCCTCAAGGGCGACGAGGGCAAGGGCGGCGCGCGCTACGTGAAGCACGGCGGACTCTGCCTCGAGACGCAGGACTACCCGGACGCCGTCCACAACGCCAAGTTCCCCACCGAGATCTACCGCAAGGGCCAGGAGTACAAGCACTACATGCTCTACAAGTTCTCTCTCGCCAAGAAGTAGATTATTAAGACGTTCGTCGTAATCAAATCAAGAATTCAAGATAATTATTAGCCTACATGGTTTTTGTGAGCGATTATGTATCTTAGATTATGCTAGTAGTACACTTAGGTGATCGGTATGAAGCTTACGTGATTTTAGATGATGATTAACGTGCCAAATAATTCGCAAAAGAGAGCAGCACATG]
[+] EMBL C73139               [                                                                                                                                                                                             AGTTCTCCGTCGTCGTCACCAACTGGGGCGCCACCATCCTCACCGTCAACCTCCCCGACAAGAACGGGCACATTGATGACGTCGTTCTTGGCTACAAAGATATTGGATCTTACGTGAATGACACGACCTACTTCGGGGCGCTGGTGGGGCGGGTGGCGAACCGGATCGCCGGCGGGAGGTTCACGGTGAAGGGGCATGCGTTCCACACGTACAAGAACGACGGCAAGAACACGCTCCACGGCGGCCACCGCGGGTTCAACCAGGTGTTCTGGTCGGTCCGGGAGAGGGCCACCGGCCACTTTCCCCTTACATCACCTTCTACTTACCGGGAGCTAACGACGGCGAGCAGGGCTTTCCCGGGGCGCCCTTCGACGTTGCTCGTTCACCTTACAAGATTCGACGGCGACTACTCCTTTCAGCGTTCANCATGTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU075407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         agGCCCACNTCGGGGCGCGTGCTGGAGCTNTGGTCCGACCAGCCCGGGCTGCAGTTCTACACGGGCAACTTCNTCAAGGGCGACGAGGGCAAGGGCGGCGCGCGCTACGTGAAGCACGGCGGACTCTGCCTCGAGACGCAGGACTACCCGGACGCCGTCCACAACGCCAAGTTCCCCACCGAGATCTACCGCAAGGGCCAGGAGTACAAGCACTACATGCTCTACAAGTTCTCTCTCGCCAAGAAGTAGATTATTAAGACGTTCGTCGTAATCAAATCAAGAATTCAAGATAATTATTAGCCTACATGGTTTTTGTGAGCGATTATGTATCTTAGATTATGCTAGTAGTACACTTAGGTGATCGGTATGAAGCTTACGTGATTTTAGATGATGATTAACGTGCCAAATAATTCGCAAAAa             ]




>consensus_5049#0
TAGAGGAAGATTAGTAGTATTAGTAGTCGGGATTAGGCAGTAATGGCGGCGACGAGCGCC
AGGAGCGTGGCGTGGCAATGGTTGGCCGTGGCGGCGGCGGTGGCGGCGGCGTCTCTGATC
GGCGGCACGCCGGCGGAGGCGAGGGGGGAGGGAAGGAGTCCATCGGTTTCTACGAGCTGC
GTCGGGGCGAGTTCTCCGTCGTCGTCACCAACTGGGGCGCCACCATCCTCACCGTCAACC
TCCCCGACAAGAACGGGCACATTGATGACGTCGTTCTTGGCTACAAAGATATTGGATCTT
ACGTGAATGACACGACCTACTTCGGGGCGCTGGTGGGGCGGGTGGCGAACCGGATCGCCG
GCGGGAGGTTCACGGTGAAGGGGCATGCGTTCCACACGTACAAGAACGACGGCAAGAACA
CGCTCCACGGCGGCCACCGCGGGTTCAACCAGGTGTTCTGGTCGGTCCGGGAGAGGGCCA
CCGGCCACTTCCCCTACATCACCTTCTACTACCGGAGCTACGACGGCGAGCAGGGCTTCC
CGGGCGCCCTCGACGTGCTCGTCACCTACAAGATCGACGGCGACTACTCCTTCAGCGTCA
CCATGTACGCCCGCCCCGTCGACGACGGCAAGCCCACGCCGGTCAACCTCGCCCAGCACA
CCTACTGGGACCTCCGCGGCCACGGCAACGGCACCATCCTCGACCACTCCGTCCAGATCT
TCGCGTCGGCGGTCACCCCCGTCGGCGCCGGCCTCATCCCCACGGGAGCCGTCTCGCCCG
TCTCCGGCACGCCGTTCGACTTCCGCGCCCCCGCGCCGCCCGGCGCGCGCATCGCCGACG
TCCCCGGCGGCGGGTACGACATCAACTACGTGCTCGACGGCGAGGCCGACGGGCAGGGCG
TGCGCAAGGCGGCGGTGGTGAGCGAGCCCACCTCGGGGCGCGTGCTGGAGCTGTGGTCCG
ACCAGCCCGGGCTGCAGTTCTACACGGGCAACTTCCTCAAGGGCGACGAGGGCAAGGGCG
GCGCGCGCTACGTGAAGCACGGCGGACTCTGCCTCGAGACGCAGGACTACCCGGACGCCG
TCCACAACGCCAAGTTCCCCACCGAGATCTACCGCAAGGGCCAGGAGTACAAGCACTACA
TGCTCTACAAGTTCTCTCTCGCCAAGAAGTAGATTATTAAGACGTTCGTCGTAATCAAAT
CAAGAATTCAAGATAATTATTAGCCTACATGGTTTTTGTGAGCGATTATGTATCTTAGAT
TATGCTAGTAGTACACTTAGGTGATCGGTATGAAGCTTACGTGATTTTAGATGATGATTA
ACGTGCCAAATAATTCGCAAAAGAGAGCAGCACATG
clustalw multiple alignements is not computed in this case