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Oryza sativa
cluster # 5050 cluster # 5050       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5050#0 length = 1857 sequences # 3  

consensusID : consensus_5050#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1857
fasta sequence
                              [GGATAGGATGAGACAGTGCATGGAGGAGCTGCATCGGTCGGTCACGGCCGCATGGCAGCTGCAGACTGTGCTCACCAAGAAACGTGTTCCATTCACACAAATGCTGTTCCTCGAGGAGGTTTGGCAGGAGGGTGATCCTCTGTTAACAGAGAGAGTATGGGATGCTATTGTTAAGGCCTTTGCAAGTCAACTGAAATCTGCCTTTACAGCGTCAAGCTTTGTGAAGGAAATTTTTACTCTTGGATACCCAAGATTGTTTTCAATGATTGAGAACCTCCTCGAGAGGATTTTAAGAGACACCGATGTAAAAGGCACCCTTCCAGCTCTTACTCCCGTAGGGAAAAACCACATGACTGCAGCCATTGAGATATTCCAGACAGCCTTTCTGGCTCTTTGTCATAGTCGCCTCTCTGATTATATCAATAGCATATTTCCCATGTCAGGCCGTGGTATACCTTCAAAAGACCAAATATCAAGGTTAATTTCTCGCATCCAAGAGGAAGTTGAAGTTGTGAGAACTCATGGGCATTTGCTTGCTCGTGTTCTACAAGAAATTGGAAAAGTTTTGCTTCTCCTAGCACAAAGAGCTGAATATCAGATCTCTACTGGCACTGAAGCCCGGCAAGTTACTGGCACAGTGACTCCAGCTCAACTGAAAAACTTTGCTCTATGTCTTCACCTCCAGGATGTTCACACACGTATTTCAAGCATTGTGTCAACACTTCCAAATGTTACCTCTGAAAAACTTTCCAAATCCCTTGAGGCCATTTATACAGTCGCGTGTGATTCAGTGAGCCCTCTATTCAAAGAAATGTTTGATCGTCTCGGATCATGCATTCTGAAAATGCACGAGCAGGACTTTGGAACTCATGGAATGGACGCAACAATGGATAACAACGCTTCAGCTTACATGGAGGAACTGCAGAAGTGTGCTGTCCACTTCCGTAGCGAGTTCTTGTCAAAGCTTCTACCTTCATCATCATCCCGCTCAGAGACCATCTGTACCATAATGGTTAGAAGTATGGCCTCAAGAGTCCTCATATTGTTCATAAGGCACGCCTCTCTAGTTAGGCCACTCTCTGAAGCCGGGAAGCTGAGAATGACAAGGGACATGGCCGAGCTGGAGCTCGCTGTTGGTCAGAATCTGTTTCCAGTGGAGCAGCTAGGCGCACCGTACCGGGCGCTGCGTGCATTCAGGCCTGTCCTATTCCTGGAGACGTCTCAGCTTGAGAAATCTCCACTCCTTCAGGACTTGCCCCCTAGTGTGATCCTCCACCACCTATATTCTCGAGGACCTGATGAGTTACAGTCTCCATTGCAGCGTAACAAGCTCACGCCGCTGCAGTATTCTCTCTGGCTTGATTCCCAGGGCGAGGATCAGATCTGGAAAGGGGTGAAAGCAACCTTGGATGACTACGAGATGAAGGTCAGGTCTCGCGGAGATAAGGAGTTCAGCCCTGTGTACCCTCTCATGCTTCAGATTGGATCTGCATTGTCTCAGGCCAAGGGCTAAACCTGTGTTCAGTTCAACCCAGCATCACATATGTTTGTATCATCATCATGTAGGCATTGGGTACTTGAGAGATCGATTGAGCTTTGGAATAGTTTATACAAATGAAATAGCATTTGCATTTGTTTTTTTTATGGAAATAAAGGTGTTCAAAGTACAGACTCTTTCTCCTAGCTCCTATTATGTTGTGAAGTGTGTGATATGATTGATCATTGTACATCTATTAGTCCTGTTGTTCCATCTGCCTGCTTGACTACAAGCATGGGAATTTTGCATGCGCGGCACGCTGATCACTTGCCAGTTGTATGTATGATCTTTGGTGCTAAATCACCCGAAATGAAGGAATT]

[+] EMBL AK103841             [GGATAGGATGAGACAGTGCATGGAGGAGCTGCATCGGTCGGTCACGGCCGCATGGCAGCTGCAGACTGTGCTCACCAAGAAACGTGTTCCATTCACACAAATGCTGTTCCTCGAGGAGGTTTGGCAGGAGGGTGATCCTCTGTTAACAGAGAGAGTATGGGATGCTATTGTTAAGGCCTTTGCAAGTCAACTGAAATCTGCCTTTACAGCGTCAAGCTTTGTGAAGGAAATTTTTACTCTTGGATACCCAAGATTGTTTTCAATGATTGAGAACCTCCTCGAGAGGATTTTAAGAGACACCGATGTAAAAGGCACCCTTCCAGCTCTTACTCCCGTAGGGAAAAACCACATGACTGCAGCCATTGAGATATTCCAGACAGCCTTTCTGGCTCTTTGTCATAGTCGCCTCTCTGATTATATCAATAGCATATTTCCCATGTCAGGCCGTGGTATACCTTCAAAAGACCAAATATCAAGGTTAATTTCTCGCATCCAAGAGGAAGTTGAAGTTGTGAGAACTCATGGGCATTTGCTTGCTCGTGTTCTACAAGAAATTGGAAAAGTTTTGCTTCTCCTAGCACAAAGAGCTGAATATCAGATCTCTACTGGCACTGAAGCCCGGCAAGTTACTGGCACAGTGACTCCAGCTCAACTGAAAAACTTTGCTCTATGTCTTCACCTCCAGGATGTTCACACACGTATTTCAAGCATTGTGTCAACACTTCCAAATGTTACCTCTGAAAAACTTTCCAAATCCCTTGAGGCCATTTATACAGTCGCGTGTGATTCAGTGAGCCCTCTATTCAAAGAAATGTTTGATCGTCTCGGATCATGCATTCTGAAAATGCACGAGCAGGACTTTGGAACTCATGGAATGGACGCAACAATGGATAACAACGCTTCAGCTTACATGGAGGAACTGCAGAAGTGTGCTGTCCACTTCCGTAGCGAGTTCTTGTCAAAGCTTCTACCTTCATCATCATCCCGCTCAGAGACCATCTGTACCATAATGGTTAGAAGTATGGCCTCAAGAGTCCTCATATTGTTCATAAGGCACGCCTCTCTAGTTAGGCCACTCTCTGAAGCCGGGAAGCTGAGAATGACAAGGGACATGGCCGAGCTGGAGCTCGCTGTTGGTCAGAATCTGTTTCCAGTGGAGCAGCTAGGCGCACCGTACCGGGCGCTGCGTGCATTCAGGCCTGTCCTATTCCTGGAGACGTCTCAGCTTGAGAAATCTCCACTCCTTCAGGACTTGCCCCCTAGTGTGATCCTCCACCACCTATATTCTCGAGGACCTGATGAGTTACAGTCTCCATTGCAGCGTAACAAGCTCACGCCGCTGCAGTATTCTCTCTGGCTTGATTCCCAGGGCGAGGATCAGATCTGGAAAGGGGTGAAAGCAACCTTGGATGACTACGAGATGAAGGTCAGGTCTCGCGGAGATAAGGAGTTCAGCCCTGTGTACCCTCTCATGCTTCAGATTGGATCTGCATTGTCTCAGGCCAAGGGCTAAACCTGTGTTCAGTTCAACCCAGCATCACATATGTTTGTATCATCATCATGTAGGCATTGGGTACTTGAGAGATCGATTGAGCTTTGGAATAGTTTATACAAATGAAATAGCATTTGCATTTGTTTTTTTTATGGAAATAAAGGTGTTCAAAGTACAGACTCTTTCTCCTAGCTCCTATTATGTTGTGAAGTGTGTGATATGAT                                                                                                                                             ]
[+] EMBL AK058213             [                                                                                                                                                                                                                                                                                                                                                                                                                               TATATCAATAGCATATTTCCCATGTCAGGCCGTGGTATACCTTCAAAAGACCAAATATCAAGGTTAATTTCTCGCATCCAAGAGGAAGTTGAAGTTGTGAGAACTCATGGGCATTTGCTTGCTCGTGTTCTACAAGAAATTGGAAAAGTTTTGCTTCTCCTAGCACAAAGAGCTGAATATCAGATCTCTACTGGCACTGAAGCCCGGCAAGTTACTGGCACAGTGACTCCAGCTCAACTGAAAAACTTTGCTCTATGTCTTCACCTCCAGGATGTTCACACACGTATTTCAAGCATTGTGTCAACACTTCCAAATGTTACCTCTGAAAAACTTTCCAAATCCCTTGAGGCCATTTATACAGTCGCGTGTGATTCAGTGAGCCCTCTATTCAAAGAAATGTTTGATCGTCTCGGATCATGCATTCTGAAAATGCACGAGCAGGACTTTGGAACTCATGGAATGGACGCAACAATGGATAACAACGCTTCAGCTTACATGGAGGAACTGCAGAAGTGTGCTGTCCACTTCCGTAGCGAGTTCTTGTCAAAGCTTCTACCTTCATCATCATCCCGCTCAGAGACCATCTGTACCATAATGGTTAGAAGTATGGCCTCAAGAGTCCTCATATTGTTCATAAGGCACGCCTCTCTAGTTAGGCCACTCTCTGAAGCCGGGAAGCTGAGAATGACAAGGGACATGGCCGAGCTGGAGCTCGCTGTTGGTCAGAATCTGTTTCCAGTGGAGCAGCTAGGCGCACCGTACCGGGCGCTGCGTGCATTCAGGCCTGTCCTATTCCTGGAGACGTCTCAGCTTGAGAAATCTCCACTCCTTCAGGACTTGCCCCCTAGTGTGATCCTCCACCACCTATATTCTCGAGGACCTGATGAGTTACAGTCTCCATTGCAGCGTAACAGGCTCACGCCGCTGCAGTATTCTCTCTGGCTTGATTCCCAGGGCGAGGATCAGATCTGGAAAGGGGTGAAAGCAACCTTGGATGACTACGAGATGAAGGTCAGGTCTCGCGGAGATAAGGAGTTCAGCCCTGTGTACCCTCTCATGCTTCAGATTGGATCTGCATTGTCTCAGGCCAAGGGCTAAACCTGTGTTCAGTTCAACCCAGCATCACATATGTTTGTATCATCATCATGTAGGCATTGGGTACTTGAGAGATCGATTGAGCTTTGGAATAGTTTATACAAATGAAATAGCATTTGCATTTGTTTTTTTTATGGAAATAAAGGTGTTCAAAGTACAGACTCTTTCTCCTAGCTCCTATTATGTTGTGAAGTGTGTGATATGATTGATCATTGTACATCTATTAGTCCTGTTGTTCCATCTGCCTGCTTGACTACAAGCATGGGAATTTTGCATGCGCGGCACGCTGATCACTTGCCAGTTGTATGTATGATCTTTGGTGCTAAATCACCCGAAATGAAGGAATT]
[+] EMBL AK058699             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTTTTTTTATGGAAATAAAGGTGTTCAAAGTACAGACTCTTTCTCCTAGCTCCTATTATGTTGTGAAGTGTGTGATATGATTGATCATTGTACATCTATTAGTCCTGTTGTTCCATCTGCCTGCTTGACTACAAGCATGGGAATTTTGCATGCGCGGCACGCTGATCACTTGCCAGTTGTATGTATGATCTTTGGTGCTAAATCACCCGAAATGAAGGAATT]


>consensus_5050#0 GGATAGGATGAGACAGTGCATGGAGGAGCTGCATCGGTCGGTCACGGCCGCATGGCAGCT GCAGACTGTGCTCACCAAGAAACGTGTTCCATTCACACAAATGCTGTTCCTCGAGGAGGT TTGGCAGGAGGGTGATCCTCTGTTAACAGAGAGAGTATGGGATGCTATTGTTAAGGCCTT TGCAAGTCAACTGAAATCTGCCTTTACAGCGTCAAGCTTTGTGAAGGAAATTTTTACTCT TGGATACCCAAGATTGTTTTCAATGATTGAGAACCTCCTCGAGAGGATTTTAAGAGACAC CGATGTAAAAGGCACCCTTCCAGCTCTTACTCCCGTAGGGAAAAACCACATGACTGCAGC CATTGAGATATTCCAGACAGCCTTTCTGGCTCTTTGTCATAGTCGCCTCTCTGATTATAT CAATAGCATATTTCCCATGTCAGGCCGTGGTATACCTTCAAAAGACCAAATATCAAGGTT AATTTCTCGCATCCAAGAGGAAGTTGAAGTTGTGAGAACTCATGGGCATTTGCTTGCTCG TGTTCTACAAGAAATTGGAAAAGTTTTGCTTCTCCTAGCACAAAGAGCTGAATATCAGAT CTCTACTGGCACTGAAGCCCGGCAAGTTACTGGCACAGTGACTCCAGCTCAACTGAAAAA CTTTGCTCTATGTCTTCACCTCCAGGATGTTCACACACGTATTTCAAGCATTGTGTCAAC ACTTCCAAATGTTACCTCTGAAAAACTTTCCAAATCCCTTGAGGCCATTTATACAGTCGC GTGTGATTCAGTGAGCCCTCTATTCAAAGAAATGTTTGATCGTCTCGGATCATGCATTCT GAAAATGCACGAGCAGGACTTTGGAACTCATGGAATGGACGCAACAATGGATAACAACGC TTCAGCTTACATGGAGGAACTGCAGAAGTGTGCTGTCCACTTCCGTAGCGAGTTCTTGTC AAAGCTTCTACCTTCATCATCATCCCGCTCAGAGACCATCTGTACCATAATGGTTAGAAG TATGGCCTCAAGAGTCCTCATATTGTTCATAAGGCACGCCTCTCTAGTTAGGCCACTCTC TGAAGCCGGGAAGCTGAGAATGACAAGGGACATGGCCGAGCTGGAGCTCGCTGTTGGTCA GAATCTGTTTCCAGTGGAGCAGCTAGGCGCACCGTACCGGGCGCTGCGTGCATTCAGGCC TGTCCTATTCCTGGAGACGTCTCAGCTTGAGAAATCTCCACTCCTTCAGGACTTGCCCCC TAGTGTGATCCTCCACCACCTATATTCTCGAGGACCTGATGAGTTACAGTCTCCATTGCA GCGTAACAAGCTCACGCCGCTGCAGTATTCTCTCTGGCTTGATTCCCAGGGCGAGGATCA GATCTGGAAAGGGGTGAAAGCAACCTTGGATGACTACGAGATGAAGGTCAGGTCTCGCGG AGATAAGGAGTTCAGCCCTGTGTACCCTCTCATGCTTCAGATTGGATCTGCATTGTCTCA GGCCAAGGGCTAAACCTGTGTTCAGTTCAACCCAGCATCACATATGTTTGTATCATCATC ATGTAGGCATTGGGTACTTGAGAGATCGATTGAGCTTTGGAATAGTTTATACAAATGAAA TAGCATTTGCATTTGTTTTTTTTATGGAAATAAAGGTGTTCAAAGTACAGACTCTTTCTC CTAGCTCCTATTATGTTGTGAAGTGTGTGATATGATTGATCATTGTACATCTATTAGTCC TGTTGTTCCATCTGCCTGCTTGACTACAAGCATGGGAATTTTGCATGCGCGGCACGCTGA TCACTTGCCAGTTGTATGTATGATCTTTGGTGCTAAATCACCCGAAATGAAGGAATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)