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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5053 cluster # 5053       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5053#0 length = 715 sequences # 3  

consensusID : consensus_5053#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 715
fasta sequence
                              [ATCCTCCCCTCCGGCCTCCACCCGCCGTCGTCCGTCGCCGTTGCGCGCGCGCCACCCCCTCCCTCCTTCCCGTGCGCCGCCGCCTCGTCGTTCCATCTAAGTCGCGAGGGAACGAGCTGAACCCCATCTGCGCTGGTAAGCGCGATGGCGAACCCGCTGCACGGCTCGGGTCCGCTTCGATCCAGGAATGCGTCGAGCTCGGACGAGATCCAGCTGCGGATCGATCCGGTGCACGGCGATCTTGATGAGGAGATCGATGGGCTGCACTCGAGGGTTCGCCTACTGAAAGGCGTGGCCCAGGAGATAAATGCTGAAGCCAAGTTCCAGAATGATTTCCTCAGCCAACTGCAAATGACCCTCATAAAAGCTCAGGCTGGAGTGAAGCATAACATGCGAAGGATGAACAAGAGCATCATCCAACAGGGCTCGAATCATGTTGTGCACGTGGTCCTTTTTGCTCTGTTTTGCTTCTTCGTTGTCTATCTCTTGTCAAAGTTCTCTAGAAGATAATAACACTGTTAGACATATGGCTATAAGATAGTTGAGTTCTGTCAACCTAGTGACCATGAGGGTATACCATTGGTTTTAACTTGTATACTACATATGGACACATCTCTGAAGTTTATGTAATGGCTTCTGTGATATGGATATAATATATCCTGACATAGGTATGTTACTCTATGGATTAATGCATACAAGCTATACTCTTAATTCC]

[+] EMBL AK062833             [ATCCTCCCCTCCGGCCTCCACCCGCCGTCGTCCGTCGCCGTTGCGCGCGCGCCACCCCCTCCCTCCTTCCCGTGCGCCGCCGCCTCGTCGTTCCATCTAAGTCGCGAGGGAACGAGCTGAACCCCATCTGCGCTGGTAAGCGCGATGGCGAACCCGCTGCACGGCTCGGGTCCGCTTCGATCCAGGAATGCGTCGAGCTCGGACGAGATCCAGCTGCGGATCGATCCGGTGCACGGCGATCTTGATGAGGAGATCGATGGGCTGCACTCGAGGGTTCGCCTACTGAAAGGCGTGGCCCAGGAGATAAATGCTGAAGCCAAGTTCCAGAATGATTTCCTCAGCCAACTGCAAATGACCCTCATAAAAGCTCAGGCTGGAGTGAAGCATAACATGCGAAGGATGAACAAGAGCATCATCCAACAGGGCTCGAATCATGTTGTGCACGTGGTCCTTTTTGCTCTGTTTTGCTTCTTCGTTGTCTATCTCTTGTCAAAGTTCTCTAGAAGATAATAACACTGTTAGACATATGGCTATAAGATAGTTGAGTTCTGTCAACCTAGTGACCATGAGGGTATACCATTGGTTTTAACTTGTATACTACATATGGACACATCTCTGAAGTTTATGTAATGGCTTCTGTGATATGGATATAATATATCCTGACATAGGTATGTTACTCTATGGATTAATGCATACAAGCTATACTCTTAATTCC]
[+] EMBL CF291829             [        CTCCGGCCTCCACCCGCCGTCGTCCGTCGCCGTTGCGCGCGCGCCACCCCCTCCCTCCTTCCCGTGCGCCGCCGCCTCGTCGTTCCATCTAAGTCGCGAGGGAACGAGCTGAACCCCATCTGCGCTGGTAAGCGCGATGGCGAACCCGCTGCACGGCTCGGGTCCGCTTCGATCCAGGAATGCGTCGAGCTCGGACGAGATCCAGCTGCGGATCGATCCGGTGCACGGCGATCTTGATGAGGAGATCGATGGGCTGCACTCGAGGGTTCGCCTACTGAAAGGCGTGGCCCAGGAGATAAATGCTGAAGCCAAGTTCCAGAATGATTTCCTCAGCCAACTGCAAATGACCCTCATAAAAGCTCAGGCTGGAGTGAAGCATAACATGCGAAGGATGAACAAGAGCATCATCCAACAGGGCTC                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF291828             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TACCATTGGTTTTAACTTGTATACTACATATGGACACATCTCTGAAGTTTATGTAATGGCTTCTGTGATATGGATATAATATATCCTGACATAGGTATGTTACTCTA GGATTAATGCATACAAGCTATACTCTTAAaaaa]


>consensus_5053#0 ATCCTCCCCTCCGGCCTCCACCCGCCGTCGTCCGTCGCCGTTGCGCGCGCGCCACCCCCT CCCTCCTTCCCGTGCGCCGCCGCCTCGTCGTTCCATCTAAGTCGCGAGGGAACGAGCTGA ACCCCATCTGCGCTGGTAAGCGCGATGGCGAACCCGCTGCACGGCTCGGGTCCGCTTCGA TCCAGGAATGCGTCGAGCTCGGACGAGATCCAGCTGCGGATCGATCCGGTGCACGGCGAT CTTGATGAGGAGATCGATGGGCTGCACTCGAGGGTTCGCCTACTGAAAGGCGTGGCCCAG GAGATAAATGCTGAAGCCAAGTTCCAGAATGATTTCCTCAGCCAACTGCAAATGACCCTC ATAAAAGCTCAGGCTGGAGTGAAGCATAACATGCGAAGGATGAACAAGAGCATCATCCAA CAGGGCTCGAATCATGTTGTGCACGTGGTCCTTTTTGCTCTGTTTTGCTTCTTCGTTGTC TATCTCTTGTCAAAGTTCTCTAGAAGATAATAACACTGTTAGACATATGGCTATAAGATA GTTGAGTTCTGTCAACCTAGTGACCATGAGGGTATACCATTGGTTTTAACTTGTATACTA CATATGGACACATCTCTGAAGTTTATGTAATGGCTTCTGTGATATGGATATAATATATCC TGACATAGGTATGTTACTCTATGGATTAATGCATACAAGCTATACTCTTAATTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)