These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5091#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1098 fasta sequence [ACTCCCAAAAAGTGGCCGCGGAAAATTTCGAATTCCCCCCACCCGTCGTCGGCGGCGACCGCGGGTGCCCAAGCCCAACCCCCCGCCGCCGCTCCCCTCGCCGTCCGCCGACCCACACCACCACCACTCAGGACCCCCTCATACCAGGCATGGAGGAGAGCGACGAGACCGCCGTGGAGGCGGCGCTGGGGCTGAGCGCCTCGTTCTTCGTCAACTCGGTCCTCAACGCGGTCGACGACGTCCGCTACGGGGCCTTCGAGTACTGCCTCCAGGAAGGCGCCCCCGAGGCCGTCGGCGCCGCCATGGCGACCCAGAAGGCCGAGGAGCTGGAGCGGGGTGTAATCAGCATTCACAACTTGGTGAAGGATGTATTGGATAAGAGAATGAGCAATTGGGAGAAATACTGCCTTCGACATTGTTTCGCAATACCTGAAGGATTCCTGACACGTGAAGATGATATTCCTGC-AAAAAATCACTCAATGATGGGAATTCTGATTCGGATCTCGATGCTGAACTTGTTTCTCTTAGGAAAAAACTTGAAGATGCTAACAATGAATCTGAAGAACTTCAAAAAGAGCTTTCT-TCCTTAGAAAGACAAGCTGAGTG-CCAGAGAAATTTGGATTCCTCTATGGCTGAATTATTGAAGGTGTTTGAAAGCAAGGCCTTTCAAGACAATTTTCAAGATCTTGTGAACGTAATACCACTATTTCAGCGGAAACTGGAAGGTATGAAAAGGAAGATTGTTGAGAACATTGACGATCAAATTGATTGGAACGTCAATGGACACCACAAGCGGTTAGCATCAGGTTTCACTGCCAGAACAGAAGACAGTCAAGATGTTGTGAATGTCTTAAAGAAGTATTAGTAGCTCCCACTTTTATGCGACCTGTGCGATAACAGGACGCCTGCTATGTGCTATCCTTCGTAGCACGGGATAAGCTGGTTATATGTTTGGACTCTTGCTAACTGAGTACCGCCAATGCAGATCTTCAATGTAATCCTGAACTGCGATTCCTTCCGAACAATTTGTACGTAAACGTAAAGTACA-TGGGCTTTCCATAATTGGTTTATACGTGGTTATTTCTCCGGATGGCCGGA] [+] EMBL AK061245 [ACTCCCAAAAAGTGGCCGCGGAAAATTTCGAATTCCCCCCACCCGTCGTCGGCGGCGACCGCGGGTGCCCAAGCCCAACCCCCCGCCGCCGCTCCCCTCGCCGTCCGCCGACCCACACCACCACCACTCAGGACCCCCTCATACCAGGCATGGAGGAGAGCGACGAGACCGCCGTGGAGGCGGCGCTGGGGCTGAGCGCCTCGTTCTTCGTCAACTCGGTCCTCAACGCGGTCGACGACGTCCGCTACGGGGCCTTCGAGTACTGCCTCCAGGAAGGCGCCCCCGAGGCCGTCGGCGCCGCCATGGCGACCCAGAAGGCCGAGGAGCTGGAGCGGGGTGTAATCAGCATTCACAACTTGGTGAAGGATGTATTGGATAAGAGAATGAGCAATTGGGAGAAATACTGCCTTCGACATTGTTTCGCAATACCTGAAGGATTCCTGACACGTGAAGATGATATTCCTGC AAAAAATCACTCAATGATGGGAATTCTGATTCGGATCTCGATGCTGAACTTGTTTCTCTTAGGAAAAAACTTGAAGATGCTAACAATGAATCTGAAGAACTTCAAAAAGAGCTTTCT TCCTTAGAAAGACAAGCTGAGTG CCAGAGAAATTTGGATTCCTCTATGGCTGAATTATTGAAGGTGTTTGAAAGCAAGGCCTTTCAAGACAATTTTCAAGATCTTGTGAACGTAATACCACTATTTCAGCGGAAACTGGAAGGTATGAAAAGGAAGATTGTTGAGAACATTGACGATCAAATTGATTGGAACGTCAATGGACACCACAAGCGGTTAGCATCAGGTTTCACTGCCAGAACAGAAGACAGTCAAGATGTTGTGAATGTCTTAAAGAAGTATTAGTAGCTCCCACTTTTATGCGACCTGTGCGATAACAGGACGCCTGCTATGTGCTATCCTTCGTAGCACGGGATAAGCTGGTTATATGTTTGGACTCTTGCTAACTGAGTACCGCCAATGCAGATCTTCAATGTAATCCTGAACTGCGATTCCTTCCGAACAATTTGTACGTAAACGTAAAGTACA TGGGCTTTCCATAATTGGTTTATACGTGGTTATTTCTCCGGATGGCCGGA] [+] EMBL AK099327 [ TCGGCGGCGACCGCGGGTGCCCAAGCCCAACCCCCCGCCGCCGCTCCCCTCGCCGTCCGCCGACCCACACCACCACCACTCAGGACCCCCTCATACCAGGCATGGAGGAGAGCGACGAGACCGCCGTGGAGGCGGCGCTGGGGCTGAGCGCCTCGTTCTTCGTCAACTCGGTCCTCAACGCGGTCGACGACGTCCGCTACGGGGCCTTCGAGTACTGCCTCCAGGAAGGCGCCCCCGAGGCCGTCGGCGCCGCCATGGCGACCCAGAAGGCCGAGGAGCTGGAGCGGGGTGTAATCAGCATTCACAACTTGGTGAAGGATGTATTGGATAAGAGAATGAGCAATTGGGAGAAATACTGCCTTCGACATTGTTTCGCAATACCTGAAGGATTCCTGACACGTGAAGATGATATTCCTGCAAAAAAATCACTCAATGATGGGAATTCTGATTCGGATCTCGATGCTGAACTTGTTTCTCTTAGGAAAAAACTTGAAGATGCTAACAATGAATCTGAAGAACTTCAAAAAGAGCTTTCT TCCTTAGAAAGACAAGCTGAGTG CCAGAGAAATTTGGATTCCTCTATGGCTGAATTATTGAAGGTGTTTGAAAGCAAGGCCTTTCAAGACAATTTTCAAGATCTTGTGAACGTAATACCACTATTTCAGCGGAAACTGGAAGGTATGAAAAGGAAGATTGTTGAGAACATTGACGATCAAATTGATTGGAACGTCAATGGACACCACAAGCGGTTAGCATCAGGTTTCACTGCCAGAACAGAAGACAGTCAAGATGTTGTGAATGTCTTAAAGAAGTATTAGTAGCTCCCACTTTTATGCGACCTGTGCGATAACAGGACGCCTGCTATGTGCTATCCTTCGTAGCACGGGATAAGCTGGTTATATGTTTGGACTCTTGCTAACTGAGTACCGCCAATGCAGATCTTCAATGTAATCCTGAACTGCGATTCCTTCCGAACAATTTGTACGTAAACGTAAAGTAC ] [+] EMBL BI807269 [ TTCTCCCCTTAGAAAGACAAGCTGAGTGCCCAGAGAAATTTGGATTCCTCTAT GCTGAATTATTGAAGGTGTTTGAAAGCAAGGCATTTCAAGAC ATTTTCAAGATCTTGTGAACGTAATACCACTATTTCAGCGGAAACTGGAAGGTATGAAAAGGAAGATTGTTGAGAACATTGACGATCAAATTGATTGGAACGTCAATGGACACCACAACCGGTTAGCATCAGGTTTCACTGCCAGAACAGAAGACAGTCAAGATGTTGTGAATGTCTTAAAGAAGTATTAGTAGCTCCCACTTTTATGCGACCTGTGCGATAACAGGACGCCTGCTATGTGCTATCCTTCGTAGCACGGGATAAGCTGGTTATATGTTTGGACTCTTGCTAACTGAGTACCGCC AT CAGATCTTCAATGTAATCCTGAACTGCGATTCCTTCCGAACAATTTGTACGTAAACGTAATGTACACTGGGCTTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||