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Oryza sativa
cluster # 5092 cluster # 5092       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5092#0 length = 1652 sequences # 3  

consensusID : consensus_5092#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1652
fasta sequence
                              [TGCCCTGTTTTCTACTGTTTGGCACGCACATTTTCATGCATGCTCCCCTGCTTTTTTGGCATGGCTGGGTGAAAATCGATGGGCCAACAACTGCTCATGTGAAAGCCAAGATATTGACGCTAGCAAACGCTGCATCTCAATGCCTTGGCACGGCTCTGGTGCGAAACGACTGTTGGTCCTTCCTCAAGGGTGGTTTCACCCTCAACTCCGCTTCAGAAACCTCCGTCCTCTATTTCCAGACTGCAAGCCCAAATGCTTCAACGATCTCGATCAGAAGTGCCTCTTTGCAACCATTTTCACCTGAACAATGGAATCAGCACAGGGAGGACCGTATTCAGCTGAACCGGAAGCGCTCTGTCAATGTCCACGTGGCGGACAGCAACGGGAGTCGCGTGGTTGGTGCCAAGGTCGCGGTGCATCAGATCACCAGGGATTTCCCATTCGGCTCTGCCATCAGCAGGACAATCCTTGGGAACAAACTTTATCAGGAATGGTTCAACAAGAGGTTCAATGCGGCGGTGTTCGAGAACGAGCTCAAGTGGTATGCAACGGAGCCATACCCGGGGAAGGAGGACTATACGGTGGCGGACCAGCTGTTGCAGTTTGTGCAGGCCAACGACGCAGTGGCGCGCGGGCATAATATCTTCTGGGAGGACCCAAAGTACACGCCAGCATGGGTGAAGAATCTGACGGGGTCACAGCTACGTGCTGCCGTCTCTGGCCGCATCGAGAGCCTCCTCTCTCGGTACAAGGGCGACTTTGTGCATTGGGACGTCAGCAACGAGATGCTGCACTTCGACTTCTATGAGAACCGCCTTGGCGGCAACGCCACCGTCGACTTCTTCGACACAGCCAAGCGCGCCGACCCGCTAGCCACGCTCTTCCTCAACGACTTCAACGTCGTCGAGGTCTGCGATGACCTCAGCTCCAGTGCCGACTCCTACGTCTCCCGCCTCCGCCAACTCGCCGATGGCGGCGTCACCTTCGAAGGCATCGGCCTTGAGGGACACTTCGGCAAGCCCAACATCCCCTACGTCCGCGCCGTGCTCGATAAGCTCGGCACCCTGCGTCTCCCCATTTGGCTTACCGAGATCGACATCAGTAGCTCCTTCGACCCCAAAACGCAGGCTGCATACTTGGAAGAGGTGCTCCGAGAAGGGTTTGCCCATCCATCCGTGGATGGCATAATGCTGTGGACGGCAATGGACACCAATGCTAGCTGCTACCAGATGTGCCTGACCAACCAGAACTTCACCAACCTTCCTGCGGGAGATGTGGTGGACAAGCTGCTGGGGGAGTGGCAAACCAAGGAGACCCTGGGAACC-ACCAATGACCGCGGCTCCTTCAACTTTTCTGCCTTCTTGGGAGAATACAAGCTCTCGGTCACCTATCTCAACCTCACTGCCGAGGGAACCTTCTCGCTGGCCCATAGCGACGACACCAAGCATATCAACATCCGTCTATCACCATCATGTTGAAATTGAATTGATTCTTGTGTTATATAGAAGGATGTGATGATGAAAACTTGGTAGTGTACCTTAATTAGAGGGAGACTCCATACGTTTGTGTTGATACAATGGATTCATAATGTGTGTTCGTACAAGGCATATATATGTTGTATCTATATCAGGATTGAGGATTTCTATCAAAAA]

[+] EMBL AK105545             [TGCCCTGTTTTCTACTGTTTGGCACGCACATTTTCATGCATGCTCCCCTGCTTTTTTGGCATGGCTGGGTGAAAATCGATGGGCCAACAACTGCTCATGTGAAAGCCAAGATATTGACGCTAGCAAACGCTGCATCTCAATGCCTTGGCACGGCTCTGGTGCGAAACGACTGTTGGTCCTTCCTCAAGGGTGGTTTCACCCTCAACTCCGCTTCAGAAACCTCCGTCCTCTATTTCCAGACTGCAAGCCCAAATGCTTCAACGATCTCGATCAGAAGTGCCTCTTTGCAACCATTTTCACCTGAACAATGGAATCAGCACAGGGAGGACCGTATTCAGCTGAACCGGAAGCGCTCTGTCAATGTCCACGTGGCGGACAGCAACGGGAGTCGCGTGGTTGGTGCCAAGGTCGCGGTGCATCAGATCACCAGGGATTTCCCATTCGGCTCTGCCATCAGCAGGACAATCCTTGGGAACAAACTTTATCAGGAATGGTTCAACAAGAGGTTCAATGCGGCGGTGTTCGAGAACGAGCTCAAGTGGTATGCAACGGAGCCATACCCGGGGAAGGAGGACTATACGGTGGCGGACCAGCTGTTGCAGTTTGTGCAGGCCAACGACGCAGTGGCGCGCGGGCATAATATCTTCTGGGAGGACCCAAAGTACACGCCAGCATGGGTGAAGAATCTGACGGGGTCACAGCTACGTGCTGCCGTCTCTGGCCGCATCGAGAGCCTCCTCTCTCGGTACAAGGGCGACTTTGTGCATTGGGACGTCAGCAACGAGATGCTGCACTTCGACTTCTATGAGAACCGCCTTGGCGGCAACGCCACCGTCGACTTCTTCGACACAGCCAAGCGCGCCGACCCGCTAGCCACGCTCTTCCTCAACGACTTCAACGTCGTCGAGGTCTGCGATGACCTCAGCTCCAGTGCCGACTCCTACGTCTCCCGCCTCCGCCAACTCGCCGATGGCGGCGTCACCTTCGAAGGCATCGGCCTTGAGGGACACTTCGGCAAGCCCAACATCCCCTACGTCCGCGCCGTGCTCGATAAGCTCGGCACCCTGCGTCTCCCCATTTGGCTTACCGAGATCGACATCAGTAGCTCCTTCGACCCCAAAACGCAGGCTGCATACTTGGAAGAGGTGCTCCGAGAAGGGTTTGCCCATCCATCCGTGGATGGCATAATGCTGTGGACGGCAATGGACACCAATGCTAGCTGCTACCAGATGTGCCTGACCAACCAGAACTTCACCAACCTTCCTGCGGGAGATGTGGTGGACAAGCTGCTGGGGGAGTGGCAAACCAAGGAGACCCTGGGAACC ACCAATGACCGCGGCTCCTTCAACTTTTCTGCCTTCTTGGGAGAATACAAGCTCTCGGTCACCTATCTCAACCTCACTGCCGAGGGAACCTTCTCGCTGGCCCATAGCGACGACACCAAGCATATCAACATCCGTCTATCACCATCATGTTGAAATTGAATTGATTCTTGTGTTATATAGAAGGATGTGATGATGAAAACTTGGTAGTGTACCTTAATTAGAGGGAGACTCCATACGTTTGTGTTGATA                                                                              ]
[+] EMBL OSC201               [                                                                                                                                                                                                                                                            ATGCTTCAACGATCTCGATCAGAAGTGCCTCTTTGCAACCATTTTCACCTGAACAATGGAATCAGCACAGGGAGGACCGTATTCAGCTGAACCGGAAGCGCTTTGTCAATGTCCACGTGGCGGACA NAACGGGAGTCGCGTGGTTGGTGCCAAGGTCGCGGTGCATCAGATCACCAGGGATTTCCCATTCGGCTCTG CATCAGCAGGACAATCCTTGGGAACAAACTTTATCAGGAATGGTTCAACAAGAGGTTCAATGCGGCGGTGTTCGAGAACGAGCTCAAGTGGTATGCAACGGAGCCATACCCTNGGAAGGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU088708             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGCAAACCNAGGAGACCCTGGGAACCNCCCAATGACCGCGGCTCCTTCAACTTTTCTGCCTTCTTGGGAGAATACAAGCTCTCGGTCACCTATCTCAACCTCACTGCCGAGGGAACCTTCTCGCTGGCCCATNGCGACGACACCAAGCATATCNACATCCGTCTATCNCCATCATGTTGAAATTGAATTGATTCTTGTGTTATATAGAAGGATGTGATGATGAAAACTTGGTAGTGTACCTTAATTAGAGGGAGACTCCATACGTTTGTGTTGATACAATGGATTCATAATGTGTGTTCGTACAAGGCATATATATGTTGTATCTATATCAGGATTGAGGATTTCTATCAAAAA]


>consensus_5092#0 TGCCCTGTTTTCTACTGTTTGGCACGCACATTTTCATGCATGCTCCCCTGCTTTTTTGGC ATGGCTGGGTGAAAATCGATGGGCCAACAACTGCTCATGTGAAAGCCAAGATATTGACGC TAGCAAACGCTGCATCTCAATGCCTTGGCACGGCTCTGGTGCGAAACGACTGTTGGTCCT TCCTCAAGGGTGGTTTCACCCTCAACTCCGCTTCAGAAACCTCCGTCCTCTATTTCCAGA CTGCAAGCCCAAATGCTTCAACGATCTCGATCAGAAGTGCCTCTTTGCAACCATTTTCAC CTGAACAATGGAATCAGCACAGGGAGGACCGTATTCAGCTGAACCGGAAGCGCTCTGTCA ATGTCCACGTGGCGGACAGCAACGGGAGTCGCGTGGTTGGTGCCAAGGTCGCGGTGCATC AGATCACCAGGGATTTCCCATTCGGCTCTGCCATCAGCAGGACAATCCTTGGGAACAAAC TTTATCAGGAATGGTTCAACAAGAGGTTCAATGCGGCGGTGTTCGAGAACGAGCTCAAGT GGTATGCAACGGAGCCATACCCGGGGAAGGAGGACTATACGGTGGCGGACCAGCTGTTGC AGTTTGTGCAGGCCAACGACGCAGTGGCGCGCGGGCATAATATCTTCTGGGAGGACCCAA AGTACACGCCAGCATGGGTGAAGAATCTGACGGGGTCACAGCTACGTGCTGCCGTCTCTG GCCGCATCGAGAGCCTCCTCTCTCGGTACAAGGGCGACTTTGTGCATTGGGACGTCAGCA ACGAGATGCTGCACTTCGACTTCTATGAGAACCGCCTTGGCGGCAACGCCACCGTCGACT TCTTCGACACAGCCAAGCGCGCCGACCCGCTAGCCACGCTCTTCCTCAACGACTTCAACG TCGTCGAGGTCTGCGATGACCTCAGCTCCAGTGCCGACTCCTACGTCTCCCGCCTCCGCC AACTCGCCGATGGCGGCGTCACCTTCGAAGGCATCGGCCTTGAGGGACACTTCGGCAAGC CCAACATCCCCTACGTCCGCGCCGTGCTCGATAAGCTCGGCACCCTGCGTCTCCCCATTT GGCTTACCGAGATCGACATCAGTAGCTCCTTCGACCCCAAAACGCAGGCTGCATACTTGG AAGAGGTGCTCCGAGAAGGGTTTGCCCATCCATCCGTGGATGGCATAATGCTGTGGACGG CAATGGACACCAATGCTAGCTGCTACCAGATGTGCCTGACCAACCAGAACTTCACCAACC TTCCTGCGGGAGATGTGGTGGACAAGCTGCTGGGGGAGTGGCAAACCAAGGAGACCCTGG GAACCACCAATGACCGCGGCTCCTTCAACTTTTCTGCCTTCTTGGGAGAATACAAGCTCT CGGTCACCTATCTCAACCTCACTGCCGAGGGAACCTTCTCGCTGGCCCATAGCGACGACA CCAAGCATATCAACATCCGTCTATCACCATCATGTTGAAATTGAATTGATTCTTGTGTTA TATAGAAGGATGTGATGATGAAAACTTGGTAGTGTACCTTAATTAGAGGGAGACTCCATA CGTTTGTGTTGATACAATGGATTCATAATGTGTGTTCGTACAAGGCATATATATGTTGTA TCTATATCAGGATTGAGGATTTCTATCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)