cluster # 5093

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Oryza sativa
cluster # 5093 cluster # 5093 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5093#0 length = 444 sequences # 3

consensusID : consensus_5093#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 444
fasta sequence

                              [ATCACTGAGCTGAGCTCAGTTCAGTTCAGTTCATGGAAGTATATCTCCTTCTTGGCTTCATTTGACAACTTCCAACACAAGCAGAACAAGGTGATCAAATCATCCTCAAGGCTTGTCTTTTTTTTCCTTCTCTGGTTATCTCCAATGGAGGCTCCCCCTTCTCTTTCCATCGTCGACGAAGACGGCTTCGTCATCGACCTCTCGCTGACGCTGGGCCTGACATCGCCTCCGCCCTCTCCAGGCGGCGCGTCTCCTTCCATTCCTCCGGG-AAGAGGCGGCGGCGGCGGCACGAGTGGTGGTGACAACAACAGAGGCAGCAGAGGTGGTGGCAATGGTGGTGGTGGTGGTGGTGTGAAGCTCTTCCCTTGCCTCTTCTGCAACAAGAAGTTTCTCAAGTCGCAAGCGCTAAGGGGACACCAGAATGCACACNAGAAGGAGAAGANC]

[+] EMBL AU091433             [ATCACTGAGCTGAGCTCAGTTCAGTTCAGTTCATGGAAGTATATCTCCTTCTTGGCTTCATTTGACAACTTCCAACACAAGCAGAACAAGGTGATCAAATCATCCTCAAGGCTTGTCTTTTTTTTCCTTCTCTGGTTATCTCCAATGGAGGCTCCCCCTTCTCTTTCCATCGTCGACGAAGACGGCTTCGTCATCGACCTCTCGCTGACGCTGGGCCTGACATCGCCTCCGCCCTCTCCAGGCGGCGCGTCTCCTTCCATTCCTCCGGG AAGAGGCGGCGGCGGCGGCACGAGTGGTGGTGACAACAACAGAGGCAGCAGAGGTGGTGGCAATGGTGGTGGTGGTGGTGGTGTGAAGCTCTTCCCTTGCCTCTTCTGCAACAAGAAGTTTCTCAAGTCGCAAGCGCTAAGGGGACACCAGAATGCACACNAGAAGGAGAAGANC]
[+] EMBL AU065720             [ATCACTGAGCTGAGCTCA TTCAGTTCAGTTCATGGAAGTATATCTCCTTCTTGGCTTCATTTGACAACTTCCAACACAAGCAGAACAAGGTGATCAAATCATCCTCAAGGCTTGTCTTTTTTTTCCTTCTCTGGTTATCTCCAATGGAGGCTCCCCCTTCTCTTTCCATCGTCGACGAAGACGGCTTCGTCATCGACCTCTCGCTGACGCTGGGCCTGACATCGCCTCCGCCCTCTCCAGGCGGCG GTCTCCTTCCATTCCTCCGGG AAGAAGCGGCGGCGG GGCACGAGTGGTGGTGACAACAACAGAGGCAGCA AAGTGGTGGC ATGGTGGTGGTGGTGGTG                                                                                               ]
[+] EMBL AU065636             [ATCACTGAGCTGAGCTCAGTTCAGTTCAGTTCATGGAAGTATATCTCCTTCTTGGCTTCATTTGACAACTTCCAACACAAGCAGAACAAGGTGATCAAATCATCCTCAAGGCTTGTCTTTTTTTTCCTTCTCTGGTTATCTCCAATGGAGGCTCCCCCTTCTCTTTCCATCGTCGACGAAGACGGCTTCGTCATCGACCTCTCGCTGACGCTGGGCCTGACATCGCCTNCGCCCTCTCCAGGCGGCGCGTCTCCTTCCATTCCTCCGGGAAAAAGGCGGCGGCGGCGGCACGAGTG                                                                                                                                                     ]




>consensus_5093#0
ATCACTGAGCTGAGCTCAGTTCAGTTCAGTTCATGGAAGTATATCTCCTTCTTGGCTTCA
TTTGACAACTTCCAACACAAGCAGAACAAGGTGATCAAATCATCCTCAAGGCTTGTCTTT
TTTTTCCTTCTCTGGTTATCTCCAATGGAGGCTCCCCCTTCTCTTTCCATCGTCGACGAA
GACGGCTTCGTCATCGACCTCTCGCTGACGCTGGGCCTGACATCGCCTCCGCCCTCTCCA
GGCGGCGCGTCTCCTTCCATTCCTCCGGGAAGAGGCGGCGGCGGCGGCACGAGTGGTGGT
GACAACAACAGAGGCAGCAGAGGTGGTGGCAATGGTGGTGGTGGTGGTGGTGTGAAGCTC
TTCCCTTGCCTCTTCTGCAACAAGAAGTTTCTCAAGTCGCAAGCGCTAAGGGGACACCAG
AATGCACACNAGAAGGAGAAGANC

clustalw multiple alignements is not computed in this case