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Oryza sativa
cluster # 5098 cluster # 5098       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5098#0 length = 1158 sequences # 3  

consensusID : consensus_5098#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1158
fasta sequence
                              [CCAACCGCCGAACCCCTCGCCGCCGCTGCCCCACCGGCGGCGATGGACCCCACGCCTCACCGCGGCGGCTCGCCGTCGCCGAGGTTCACGCTGCAGCCGAGCCGCCTCCCGCCGGAGGACATGCTCTTCTGCGTCGACGTCGACCTGGAGACGCGCTCCGAGATGAGGATCGCCCCGGGCCCCGCCGCCGCCGCCGCCGCGTCGCCGGGCGCCGCGGGGGCTTCCTCGGGGGCCGCGGCTGCTTCCAGGCAGGCCGCTCGGCCGCCGGTGAAGAGGATGGACGCCGTCAAGCAGGCGCTCCTGCTCTTCGTCCACAGCAAGCTCACCATGTGCCCCGATCACCGCTTCGCCTTCGCCTCCCTCGGCGACACCGTCTCCTTGGTAAAGAAGGATTTCAGCAGTGATGCTGGTTCTGCAGTGGAGGCAATCCAATCCCTGGATGCGTCGGAAACGAGATATGCGATGGCTGATCTCACTCAGCTCTTCAAGATAGCTTACCAGGAAGGGAAAAGAGCAGAATTGCAAGGCCGCCTACTCAGAGTGGTACTCATCTACTGCCGTTCCTCAACTAAGCCTCAACATCAGTGGCCCATCAAGCAAAAGAATTTCACCTTGGACATAATCTATCTTCATGACAAGCCTACTGCTGATAACTGTCCACAGAAGGTATATGATGCTTTGGTTGATGCACTTGAGCATGTCAGCCAGTATGAGGGATACATTCTAGAGACTGGTCAGGGGCTTGCTCGAATCCTGTTCCGTCAGACTTGCATTCTTCTGTCGCATCCCTTACAGCGTTGCATCCAAGATGACCTTGATATTCCCAAGCCACTTGCTAAGAAAAATATGGTTACTGAAGCTGCGCAGAACGAAGATGGCATGCCAGTCTCCACCCAGTAGGTAGTTAGGCCTTCTAGTTCAGTGGTTTGCATCATGAAGTCAACTCAAGAGCTTCATTTCGTTTTATTTGTTTGCATTAAGGTTGTTCTGTGTAATGCAAATGACCAATTGAATGTCAATTTGTTGCTGTGTCATGCTTGGTATTGCGTTGAACTTGCAGATGCACATCATACAGAAGTTCTCTGTGGTATGGCACTTAAGTTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK068890             [CCAACCGCCGAACCCCTCGCCGCCGCTGCCCCACCGGCGGCGATGGACCCCACGCCTCACCGCGGCGGCTCGCCGTCGCCGAGGTTCACGCTGCAGCCGAGCCGCCTCCCGCCGGAGGACATGCTCTTCTGCGTCGACGTCGACCTGGAGACGCGCTCCGAGATGAGGATCGCCCCGGGCCCCGCCGCCGCCGCCGCCGCGTCGCCGGGCGCCGCGGGGGCTTCCTCGGGGGCCGCGGCTGCTTCCAGGCAGGCCGCTCGGCCGCCGGTGAAGAGGATGGACGCCGTCAAGCAGGCGCTCCTGCTCTTCGTCCACAGCAAGCTCACCATGTGCCCCGATCACCGCTTCGCCTTCGCCTCCCTCGGCGACACCGTCTCCTTGGTAAAGAAGGATTTCAGCAGTGATGCTGGTTCTGCAGTGGAGGCAATCCAATCCCTGGATGCGTCGGAAACGAGATATGCGATGGCTGATCTCACTCAGCTCTTCAAGATAGCTTACCAGGAAGGGAAAAGAGCAGAATTGCAAGGCCGCCTACTCAGAGTGGTACTCATCTACTGCCGTTCCTCAACTAAGCCTCAACATCAGTGGCCCATCAAGCAAAAGAATTTCACCTTGGACATAATCTATCTTCATGACAAGCCTACTGCTGATAACTGTCCACAGAAGGTATATGATGCTTTGGTTGATGCACTTGAGCATGTCAGCCAGTATGAGGGATACATTCTAGAGACTGGTCAGGGGCTTGCTCGAATCCTGTTCCGTCAGACTTGCATTCTTCTGTCGCATCCCTTACAGCGTTGCATCCAAGATGACCTTGATATTCCCAAGCCACTTGCTAAGAAAAATATGGTTACTGAAGCTGCGCAGAACGAAGATGGCATGCCAGTCTCCACCCAGTAGGTAGTTAGGCCTTCTAGTTCAGTGGTTTGCATCATGAAGTCAACTCAAGAGCTTCATTTCGTTTTATTTGTTTGCATTAAGGTTGTTCTGTGTAATGCAAATGACCAATTGAATGTCAATTTG                                                                                                                                       ]
[+] EMBL AU184625             [                                                                                                                                                                                                                                                                             GAAGAGGATGGACGCCGTCAAGCAGGCGCTCCTGCTCTTCGTCCACAGCAAGCTCACCATGTGCCCCGATCACCGCTTCGCCTTCGCCTCCCTCGGCGACACCGTCTCCTTGGTAAAGAAGGATTTCAGCAGTGATGCTGGTTCTGCAGTGGAGGCAATCCAATCCCTGGATGCGTCGGAAACGAGATATGCGATGGCTGATCTCACTCAGCTCTTCAAGATAGCTTACCAGGAAGGGAAAAGAGCAGAATTGCAAGGCCGCCTACTCAGAGTGGTACTCATCTACTGCCGTTCCTCAACTAAGCCTCAACATCAGTGGCCCATCAAGCAAAAGAATTTCACCTTGGACATAATCTATCTTCATGACAAGCCTACTGCTGATAACTGTCCACAGAAGGTATATGATGCTTTGGTTGATGCACTTGAGCATGTCAGCCAGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF336188             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTAGTTCAGTGGTTTGCATCATGAAGTCAACTCAAGAGCTTCATTTCGTTTTATTTGTTTGCATTAAGGTTGTTCTGTGTAATGCAAATGACCAATTGAATGTCAATTTGTTGCTGTGTCATGCTTGGTATTGCGTTGAACTTGCAGATGCACATCATACAGAAGTTCTCTGTGGTATGGCACTTAAGTTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_5098#0 CCAACCGCCGAACCCCTCGCCGCCGCTGCCCCACCGGCGGCGATGGACCCCACGCCTCAC CGCGGCGGCTCGCCGTCGCCGAGGTTCACGCTGCAGCCGAGCCGCCTCCCGCCGGAGGAC ATGCTCTTCTGCGTCGACGTCGACCTGGAGACGCGCTCCGAGATGAGGATCGCCCCGGGC CCCGCCGCCGCCGCCGCCGCGTCGCCGGGCGCCGCGGGGGCTTCCTCGGGGGCCGCGGCT GCTTCCAGGCAGGCCGCTCGGCCGCCGGTGAAGAGGATGGACGCCGTCAAGCAGGCGCTC CTGCTCTTCGTCCACAGCAAGCTCACCATGTGCCCCGATCACCGCTTCGCCTTCGCCTCC CTCGGCGACACCGTCTCCTTGGTAAAGAAGGATTTCAGCAGTGATGCTGGTTCTGCAGTG GAGGCAATCCAATCCCTGGATGCGTCGGAAACGAGATATGCGATGGCTGATCTCACTCAG CTCTTCAAGATAGCTTACCAGGAAGGGAAAAGAGCAGAATTGCAAGGCCGCCTACTCAGA GTGGTACTCATCTACTGCCGTTCCTCAACTAAGCCTCAACATCAGTGGCCCATCAAGCAA AAGAATTTCACCTTGGACATAATCTATCTTCATGACAAGCCTACTGCTGATAACTGTCCA CAGAAGGTATATGATGCTTTGGTTGATGCACTTGAGCATGTCAGCCAGTATGAGGGATAC ATTCTAGAGACTGGTCAGGGGCTTGCTCGAATCCTGTTCCGTCAGACTTGCATTCTTCTG TCGCATCCCTTACAGCGTTGCATCCAAGATGACCTTGATATTCCCAAGCCACTTGCTAAG AAAAATATGGTTACTGAAGCTGCGCAGAACGAAGATGGCATGCCAGTCTCCACCCAGTAG GTAGTTAGGCCTTCTAGTTCAGTGGTTTGCATCATGAAGTCAACTCAAGAGCTTCATTTC GTTTTATTTGTTTGCATTAAGGTTGTTCTGTGTAATGCAAATGACCAATTGAATGTCAAT TTGTTGCTGTGTCATGCTTGGTATTGCGTTGAACTTGCAGATGCACATCATACAGAAGTT CTCTGTGGTATGGCACTTAAGTTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)