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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5106 cluster # 5106       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5106#0 length = 476 sequences # 3  

consensusID : consensus_5106#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 476
fasta sequence
                              [CNNGNGNCTNTANTNGCTNGCANAANAACNTTCAACACGTCCAGACCGTCGTCAAAGGTGCCGACAATCTCCATCTGGCTGTGCTCTTTAATTAGCCAGCTCAGTTCCTGTTGTGCCAGGAATTCGTCTTCAACAATGATGACTTTCACAATATCACTCCGGCTCAAAGCAATAACGTAGCCTGTGAGGCGA-CTGGGGTGCGTTGGTTAGGAATGTAAAACGCAATTTCCGTCCCCGGCTCCAGGCGGCGGATATGCAGCCCCTCGCC-ATACAATAACTTCACGCGATGAT-GGACATTCAGCAGGCCAATTTTATTGCCCGGCATTTCATTCGCTTCGACCC-GCTCAATCACCTTT-GGATCGATGCCGTGCCCGGTATCTCGCACCGCAATGCGTACCCGATTTCCGCACTCTGGCAACGCTG-ATGGTGACAACGCCTTTACCTTTGNCAAGGCTGAATACCGTGGACAATGGCGT]

[+] EMBL OSC056               [CNNGNGNCTNTANTNGCTNGCANAANAACNTTCAACACGTCCAGACCGTCGTCAAAGGTGCCGACAATCTCCATCTGGCTGTGCTCTTTAATTAGCCAGCTCAGTTCCTGTTGTGCCAGGNATTCGTCTTCAACAATGATGACTTTCACAATATCACTCCGGCTCAAAGCAATAACGTAGCCTGTGAGGCGACCTGGGGTGCGTTGGTTAGGAATGTAAAACGCAATTTCCGTCCCCGGCTCCAGGCGGCGGATATGCAGCCCCTCGCCAATACAATAACTTCACGCGATGATGGGACATTCAGCAGGCCAATTTTATTGCCCGGCATTTCATTCGCTTCGACCCGGTTCAATCANCTTTGGGATCGATGNCGTGCCCGGTATCTCG                                                                                               ]
[+] EMBL AU069922             [                   ctgcAAAAAC TTCAACACGTCCAGACCGTCGTCAAAGGTGCCGACAATCTCCATCTGGCTGTGCTCTTTAATTAGCCAGCTCAGTTCCTGTTGTGCCAGGAATTCGTCTTCAACAATGATGACTTTCACAATATCACTCCGGCTCAAAGCAATAACGTAGCCTGTGAGGCGA CTGGGGTGCGTTGGTTAGGAATGTAAAACGCAATTTCCGTCCCCGGCTCCAGGCGGCGGATATGCAGCCCCTCGCC ATACAATAACTTCACGCGATGAT GGACATTCAGCAGGCCAATTTTATTGCCCGGCATTTCATTCGCTTCGACCC GCTCAATCACCTTT GGATCGATGCCGTGCCCGGTATCTCGCACCGCAATGCGTACCCGATTTCCGCACTCTGGCAACGCTG ATGGTGACAACGCCTTTACCTTTGNCAAGGCTGAATACCGTGGACAATGGCGT]
[+] EMBL AU069923             [                                                                                              GCCAGCTCAGTTCCTGTTGTGCCAGGAATTCGTCTTCAACAATGATGACTTTCACAATATCACTCCGGCTCAAAGCAATAACGTAGCCTGTGANGCGA CTGGGGTGCGTTGGTTAGGAATGTAAAACGCAATTTCCGTCCCCGGCTCCAGGCGGCGGATATGCAGCCCCTCGCC ATACAATAACTTCACGCGATGAT GGACATTCAGCAGGCCAATTTTATTGCCCGGCATTTCATTCGCTTCGACCC GCTCAATCACCTTT GGATCGATGCCGTGCCCGGTATCTCGCACCGCAATGCGTACCCGATTTCCGCACTCT GCAACGCTGTATGGTGACAACGCCTTTACCTTTG CAAGGCTGAATACCGTGGACAATGGCGT]


>consensus_5106#0 CNNGNGNCTNTANTNGCTNGCANAANAACNTTCAACACGTCCAGACCGTCGTCAAAGGTG CCGACAATCTCCATCTGGCTGTGCTCTTTAATTAGCCAGCTCAGTTCCTGTTGTGCCAGG AATTCGTCTTCAACAATGATGACTTTCACAATATCACTCCGGCTCAAAGCAATAACGTAG CCTGTGAGGCGACTGGGGTGCGTTGGTTAGGAATGTAAAACGCAATTTCCGTCCCCGGCT CCAGGCGGCGGATATGCAGCCCCTCGCCATACAATAACTTCACGCGATGATGGACATTCA GCAGGCCAATTTTATTGCCCGGCATTTCATTCGCTTCGACCCGCTCAATCACCTTTGGAT CGATGCCGTGCCCGGTATCTCGCACCGCAATGCGTACCCGATTTCCGCACTCTGGCAACG CTGATGGTGACAACGCCTTTACCTTTGNCAAGGCTGAATACCGTGGACAATGGCGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)