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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5107 cluster # 5107       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5107#0 length = 421 sequences # 3  

consensusID : consensus_5107#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 421
fasta sequence
                              [AGCAGCTTTGGGGAGGGTGGTGTCAGGCGCCGCAGTTGCTTACGCCGCGCTCTGCATCTTCTGCCTCTACATGTTTGCACAAAGCACTGATCTTTTCGATCAGCTCCCTTCTTGGGTTCCCGTAGGAAGAGATTCTCTTGGCGGCTCTCAGGATACAACATGATTCTGTACATCAGCTAGTTTGTGTGTACGATCGACTCTGCAGGTCAATATATAGCTTCTTGAACTGTATGTATAGCATCTGTTGCTTCTTTCACGGCTCACCTCTGCATTGCAGTTGTTCATGGTGTCCTGTAACGGCAGCATCACCTCTGTATATCATATGCTGTTGCTAGCAACTTTGTGGAAAAGAAAAATATCATTTGTGGTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCCG]

[+] EMBL AU070756             [AGCAGCTTTGGGGAGGGTGGTGTCAGGCGCCGCAGTTGCTTACGCCGCGCTCTGCATCTTCTGCCTCTACATGTTTGCACAAAGCACTGATCTTTTCGATCAGCTCCCTTCTTGGGTTCCCGTAGGAAGAGATTCTCTTGGCGGCTCTCAGGATACAACATGATTCTGTACATCAGCTAGTTTGTGTGTACGATCGACTCTGCAGGTCAATATATAGCTTCTTGAACTGTATGTATAGCATCTGTTGCTTCTTTCACGGCTCACCTCTGCATTGCAGTTGTTCATGGTGTCCTGTAACAGCAGCATCACCTCTGTATATCATATGCTGTTGCTAGCAACTTTGTGGAAAAGAAAAATATCATTTGTGGTTCTAAAAAAAAAAAAA                                    ]
[+] EMBL CF336473             [                                                                                                                                                                                                                                                                                                 TCCTGTAACGGCAGCATCACCTCTGTATATCATATGCTGTTGCTAGCAACTTTGTGGAAAAGAAAAATAT ATTTGTGGTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCCG]
[-] EMBL CF336474             [                                                                                                                                                                                                                                                                                                  CCTGTAACGGCAGCATCACCTCTGTATATCATATGCTGTTGCTAGCAACTTTGTGGAAAAGAAAAATATCATTTGTGGTTTTAAAAAAAAAAAAAAAAAAAAAAAA                         ]


>consensus_5107#0 AGCAGCTTTGGGGAGGGTGGTGTCAGGCGCCGCAGTTGCTTACGCCGCGCTCTGCATCTT CTGCCTCTACATGTTTGCACAAAGCACTGATCTTTTCGATCAGCTCCCTTCTTGGGTTCC CGTAGGAAGAGATTCTCTTGGCGGCTCTCAGGATACAACATGATTCTGTACATCAGCTAG TTTGTGTGTACGATCGACTCTGCAGGTCAATATATAGCTTCTTGAACTGTATGTATAGCA TCTGTTGCTTCTTTCACGGCTCACCTCTGCATTGCAGTTGTTCATGGTGTCCTGTAACGG CAGCATCACCTCTGTATATCATATGCTGTTGCTAGCAACTTTGTGGAAAAGAAAAATATC ATTTGTGGTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCC G



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)