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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5108 cluster # 5108       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5108#0 length = 872 sequences # 3  

consensusID : consensus_5108#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 872
fasta sequence
                              [TTTTCTCTCCCGGCTCTCTCTCTCTCCCCCTCCCCTCAAACTCCTCTGCCCCTCTCCTCCCTCCTCCCTCCCTGCGGTGGGCTCTGCCAACGGCGGCGGCGGCGGCGACGATGGTCTATGGCGACAACGACAGCTTCCTCCTCTCCTCCCCTCTCCTCCCTCCCAACGGCAGTGGAGCGCTCAGGCAGTGCAAGAGGACGGAGGAGGTGTGCCATGACTTCCTCTTCTTCTCCCCTCTCCTCTTCCTTCCAACGGTGGTGGAGGGCTCAGGCAATGGTGGAGAGCAGAGGAGGCGCGCAACGGCGGCGGCGTTTGCCGCCCGCGTGGATCCGACAGCGGTCACCCT-CCCCCTTCACGGCAGTGGCGGATCCGGTGGTGGGGAGGCGCAGCGGTGGCGGATCCGGTGATAGGGAGGTGCGGTGGTGGTCCGGGGGGGGGGAGGCATGAGTCACCCAGCCGCCTGCGAAAACCGGATTTGATCATATGGGAAAATGCATTTCGTAGCCGTGTAAATTTATATATATACTTCTAATACCAGTATGTTTCCTTTATTTTGCGTGAATTCATATCTCGAGTTTGAACCATCCCCATCGAAGCATGGAGAATCGGATACAACGAGACAGAGAATTGACTTTGCAATTTTGATGTGAATTGTATCCAGCTGGGAATTAATGTACTCTATCACAATCATTTTTTGTAATCATATTCTGTTTTTCTACAATACTTATAACACTGTAGTCTGTAGAGGCATGGTAGTGAAAATTGTAATAAATCACTGTAGTCTTGTGATGAATTGTCTTCAAAAATGATGAGGCGTTTTATAATAAGCCTTCATGTCTTGTAATATTTCTTTAGATGCATTTGTGAAAAAA]

[+] EMBL CF292469             [TTTTCTCTCCCGGCTCTCTCTCTCTCCCCCTCCCCTCAAACTCCTCTGCCCCTCTCCTCCCTCCTCCCTCCCTGCGGTGGGCTCTGCCAACGGCGGCGGCGGCGGCGACGATGGTCTATGGCGACAACGACAGCTTCCTCCTCTCCTCCCCTCTCCTCCCTCCCAACGGCAGTGGAGCGCTCAGGCAGTGCAAGAGGACGGAGGAGGTGTGCCATGACTTCCTCTTCTTCTCCCCTCTCCTCTTCCTTCCAACGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK063142             [                                         TCCTCTGCCCCTCTCCTCCCTCCTCCCTCCCTGCGGTGGGCTCTGCCAACGGCGGCGGCGGCGGCGACGATGGGCAAGGGCGACAACGACAGCTTCCTCCTCTCCTCCCCTCTCCTCCCTCCCAACGGCAGTGGAGCGCTCAGGCAGTGCAAGAGGACGGAGGAGGTGTGCCATGACTTCCTCTTCTTCTCCCCTCTCCTCTTCCTTCCAACGGTGGTGGAGGGCTCAGGCAATGGTGGAGAGCAGAGGAGGCGCGCAACGGCGGCGGCGTTTGCCGCCCGCGTGGATCCGACAGCGGTCACCCT CCCCCTTCACGGCAGTGGCGGATCCGGTGGTGGGGAGGCGCAGCGGTGGCGGATCCGGTGATAGGGAGGTGCGGTGGTGGTCCGGGGGGGGGGAGGCATGAGTCACCCAGCCGCCTGCGAAAACCGGATTTGATCATATGGGAAAATGCATTTCGTAGCCGTGTAAATTTATATATATACTTCTAATACCAGTATGTTTCCTTTATTTTGCGTGAATTCATATCTCGAGTTTGAACCATCCCCATCGAAGCATGGAGAATCGGATACAACGAGACAGAGAATTGACTTTGCAATTTTGATGTGAATTGTATCCAGCTGGGAATTAATGTACTCTATCACAAT                                                                                                                                                                                        ]
[-] EMBL CF292468             [                                                                                                                                                                                                                                                                                                               CGGCGGCGTTTGCCGCCCGCGTGGATCCGACAGCGGTCACCCTCCCCCCTTCACGGCAGTGGCGGATCCGGTGGTGGGGAGGCGCAACGGTGGCGGATCCGGTGATAGGGAGGTGCGGTGGTGGTCCGGGGGGGGGGAGGCATGAGTCGCCCAGCCGCCTGCGAAAACCGGATTTGATCATATGGGAAAATGCATTTCGTAGCCGTGTAAATTTATATATATACTTCTAATACCAGTATGTTTCCTTTATTTTGCGTGAGTTCATATCTCGAGTTTGAACCATCCCCATCGAAGCATGGAGAATCGGATACAACGAGACAGAGAATTGACTTTGCAATTTTGATGTGAATTGTATCCAGCTGGGAATTAATGTACTCTATCACAATCATTTTTTGTAATCATATTCTGTTTTTCTACAATACTTATAACACTGTAGTCTGTAGAGGCATGGTAGTGAAAATTGTAATAAATCACTGTAGTCTTGTGATGAATTGTCTTCAAAAATGATGAGGCGTTTTATAATAAGCCTTCATGTCTTGTAATATTTCTTTAGATGCATTTGTGAAAAAA]


>consensus_5108#0 TTTTCTCTCCCGGCTCTCTCTCTCTCCCCCTCCCCTCAAACTCCTCTGCCCCTCTCCTCC CTCCTCCCTCCCTGCGGTGGGCTCTGCCAACGGCGGCGGCGGCGGCGACGATGGTCTATG GCGACAACGACAGCTTCCTCCTCTCCTCCCCTCTCCTCCCTCCCAACGGCAGTGGAGCGC TCAGGCAGTGCAAGAGGACGGAGGAGGTGTGCCATGACTTCCTCTTCTTCTCCCCTCTCC TCTTCCTTCCAACGGTGGTGGAGGGCTCAGGCAATGGTGGAGAGCAGAGGAGGCGCGCAA CGGCGGCGGCGTTTGCCGCCCGCGTGGATCCGACAGCGGTCACCCTCCCCCTTCACGGCA GTGGCGGATCCGGTGGTGGGGAGGCGCAGCGGTGGCGGATCCGGTGATAGGGAGGTGCGG TGGTGGTCCGGGGGGGGGGAGGCATGAGTCACCCAGCCGCCTGCGAAAACCGGATTTGAT CATATGGGAAAATGCATTTCGTAGCCGTGTAAATTTATATATATACTTCTAATACCAGTA TGTTTCCTTTATTTTGCGTGAATTCATATCTCGAGTTTGAACCATCCCCATCGAAGCATG GAGAATCGGATACAACGAGACAGAGAATTGACTTTGCAATTTTGATGTGAATTGTATCCA GCTGGGAATTAATGTACTCTATCACAATCATTTTTTGTAATCATATTCTGTTTTTCTACA ATACTTATAACACTGTAGTCTGTAGAGGCATGGTAGTGAAAATTGTAATAAATCACTGTA GTCTTGTGATGAATTGTCTTCAAAAATGATGAGGCGTTTTATAATAAGCCTTCATGTCTT GTAATATTTCTTTAGATGCATTTGTGAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)