cluster # 5127

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Oryza sativa
cluster # 5127 cluster # 5127 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5127#0 length = 1241 sequences # 3
consensusID : consensus_5127#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1241
fasta sequence
                              [CCAATCAAACTCCAACCAAACTCACCTACCTACCCCCAACCCATCCAGAGCTAGAGCTATGTGCGGCGGCGCGATCCTCGCCGACCTCATACCGTCGCCGCGCTCCGGCGGCCACACCAAAAAGAACAAGCGGCGGCGGATCAGCGACGACGAGGACTTCGAGGCCGCCTTCGAGGAGTTCGACGCCGGCGACGACGACTCCGACTCCGACTCCGAGTCCGAGGAGGTAGACGAGTACGACGTCGTCGTCGACGACGACGACAGCGAGGACGGCGTGGTGGTTCTTCCGCCGCCGCCGCCGCCGCCGCCGGTGATTCCACATGAGCGCCATGGCGCGAGGCGGTTCCGCGGCGTGAGGAAGCGGCCGTGGGGGAAGTGGGCGGCGGAGATCCGCGACCCCGTGCGCGGCGTGCGCGTCTGGCTCGGTACCTTCCCCACCGCCGAGTCCGCCGCGCGCGCCTACGACGCCGCCGCCCGCCGCCTCCGCGGCGCCAAGGCCAAGCCCAACTTCCCCTCCGCGCCGCCGCCCTCGGCTGCTGCTCACCGCCGCAAGAAGCGCCGCGCCCACGCCGCCACGCGCTCGCCGTCGTCTCCGCCCGCCACCAGCGAGGTCACGGCGGCGTCCGCGTCCGCGTCCAGCGATGTCCCCGCGCCGGCGTTCGCTTCCTTCGTCGGCGAGCCCGGGCACGGCGGCGCCAAGTCGATGCCGACGACGAGCCACACCTCGCAGCCAGCCCCGCCGGCGACGGTGGCGTCCGAGAACGTCGACGACCCGGAGGTGTTCGACCCGTACGACGTCCACGGCGGCCTCGCCTCCTACTTCGCCGGCGGCGCGTACGAGTCCCTGGAGAGCCTGTTCGCGCACGGCGGCGACAGCGCCGCCGTCGACCAAGCGGCGAGCGACCACTGGCCGGCGGCGCTATGGAGCTTCGCAGACGACGGCTCGTTCTGCTTCTGATGCTGTCAAATCACATCGCCATTGGCGGCCATTGCAAGCCATGGCATGGCACCTGATGATGCTGATCCAGCGAACTGGTCACTCGTTCTTGATGCGTTTTCAGTTTCTTGTACAGTGTTTTTCCCCAGCAACAGTGAAGTAGTATTCAGTTATTCACTGTTCAGTCATGAGTTCATCGCAAAATATGATGTAAGTATGTGTCTTGAGATTGTTTTAGCAGTGGCTTTTGTTTGTATAATGTATTTCTCTGTAATTAATTAATAGCTGTTTTCAGTGATGAACT]

[+] EMBL AK110269             [CCAATCAAACTCCAACCAAACTCACCTACCTACCCCCAACCCATCCAGAGCTAGAGCTATGTGCGGCGGCGCGATCCTCGCCGACCTCATACCGTCGCCGCGCTCCGGCGGCCACACCAAAAAGAACAAGCGGCGGCGGATCAGCGACGACGAGGACTTCGAGGCCGCCTTCGAGGAGTTCGACGCCGGCGACGACGACTCCGACTCCGACTCCGAGTCCGAGGAGGTAGACGAGTACGACGTCGTCGTCGACGACGACGACAGCGAGGACGGCGTGGTGGTTCTTCCGCCGCCGCCGCCGCCGCCGCCGGTGATTCCACATGAGCGCCATGGCGCGAGGCGGTTCCGCGGCGTGAGGAAGCGGCCGTGGGGGAAGTGGGCGGCGGAGATCCGCGACCCCGTGCGCGGCGTGCGCGTCTGGCTCGGTACCTTCCCCACCGCCGAGTCCGCCGCGCGCGCCTACGACGCCGCCGCCCGCCGCCTCCGCGGCGCCAAGGCCAAGCCCAACTTCCCCTCCGCGCCGCCGCCCTCGGCTGCTGCTCACCGCCGCAAGAAGCGCCGCGCCCACGCCGCCACGCGCTCGCCGTCGTCTCCGCCCGCCACCAGCGAGGTCACGGCGGCGTCCGCGTCCGCGTCCAGCGATGTCCCCGCGCCGGCGTTCGCTTCCTTCGTCGGCGAGCCCGGGCACGGCGGCGCCAAGTCGATGCCGACGACGAGCCACACCTCGCAGCCAGCCCCGCCGGCGACGGTGGCGTCCGAGAACGTCGACGACCCGGAGGTGTTCGACCCGTACGACGTCCACGGCGGCCTCGCCTCCTACTTCGCCGGCGGCGCGTACGAGTCCCTGGAGAGCCTGTTCGCGCACGGCGGCGACAGCGCCGCCGTCGACCAAGCGGCGAGCGACCACTGGCCGGCGGCGCTATGGAGCTTCGCAGACGACGGCTCGTTCTGCTTCTGATGCTGTCAAATCACATCGCCATTGGCGGCCATTGCAAGCCATGGCATGGCACCTGATGATGCTGATCCAGCGAACTGGTCACTCGTTCTTGATGCGTTTTCAGTTTCTTGTACAGTGTTTTTCCCCAGCAACAGTGAAGTAGTATTCAGTTATTCACTGTTCAGTCATGAGTTCATCGCAAAATATGATGTAAGTATGTGTCTTGAGATTGTTTTAGCAGTGGCTTTTGTTTGTATAATGTATTTCTCTGTAATTAATTAATAGCTGTTTTCAGTGATGAACT]
[+] EMBL CB644252             [                        CCTACCTACCCCCAACCCATCCAGAGCTAGAGCTATGTGCGGCGGCGCGATCCTCGCCGACCTCATACCGTCGCCGCGCTCCGGCGGCCACACCAAAAAGAACAAGCGGCGGCGGATCAGCGACGACGAGGACTTCGAGGCCGCCTTCGAGGAGTTCGACGCCGGCGACGACGACTCCGACTCCGACTCCGAGTCCGAGGAGGTAGACGAGTACGACGTCGTCGTCGACGACGACGACAGCGAGGACGGCGTGGTGGTTCTTCCGCCGCCGCCGCCGCCGCCGCCGGTGATTCCACATGAGCGCCATGGCGCGAGGCGGTTCCGCGGCGTGAGGAAGCGGCCGTGGGGGAAGTGGGCGGCGGAGATCCGCGACCCCGTGCGCGGCGTGCGCGTCTGGCTCGGTACCTTCCCCACCGCCGAGTCCGCCGCGCGCGCCTACGACGCCGCCGCCCGCCGCCTCCGCGGCGCCAAGGCCAAGCCCAACTTCCCCTCCGCGCCGCCGCCCTCGGCTGCTGCTCACCGCCGCAAGAAGCGCCGCGCCCACGCCGCCACGCGCTCGCCGTCGTCTCCGCCCGCCACCAGCGAGGTCACGGCGGCGTCCGCGTCCGCGTCCAGCGATGTCCCCGCGCCGGCGTTCGCTTCCTTCGTCGGCGAGCCCGGGCACGGCGGCGCCAAGTCGATGCCGACGACGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB644253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGAAGCGCCGCGCCCACGCCGCCACGCGCTCGCCGTCGTCTCCGCCCGCCACCAGCGAGGTCACGGCGGCGTCCGCGTCCGCGTCCAGCGATGTCCCCGCGCCGGCGTTCGCTTCCTTCGTCGGCGAGCCCGGGCACGGCGGCGCCAAGTCGATGCCGACGACGAGCCACACCTCGCAGCCAGCCCCGCCGGCGACGGTGGCGTCCGAGAACGTCGACGACCCGGAGGTGTTCGACCCGTACGACGTCCACGGCGGCCTCGCCTCCTACTTCGCCGGCGGCGCGTACGAGTCCCTGGAGAGCCTGTTCGCGCACGGCGGCGACAGCGCCGCCGTCGACCAAGCGGCGAGCGACCACTGGCCGGCGGCGCTATGGAGCTTCGCAGACGACGGCTCGTTCTGCTTCTGATGCTGTCAAATCACATCGCCATTGGCGGCCATTGCAAGCCATGGCATGGCACCTGATGATGCTGATCCAGTGAACTGGTCACTCGTTCTTGATGCGTTTTCAGTTTCTTGTACAGTGTTTTTCCCCAGCAACAGTGAAGTAGTATTCAGTTATTCACTGTTCAGTCATGAGTTCATCGCAAAATATGATGTAAGTATGTGTCTTGAGATTGTTTTAGCAGTGGCTTTTGTTTGTATAATGTATTTCTCTGTAATTAATTAAaaaaaaaa              ]




>consensus_5127#0
CCAATCAAACTCCAACCAAACTCACCTACCTACCCCCAACCCATCCAGAGCTAGAGCTAT
GTGCGGCGGCGCGATCCTCGCCGACCTCATACCGTCGCCGCGCTCCGGCGGCCACACCAA
AAAGAACAAGCGGCGGCGGATCAGCGACGACGAGGACTTCGAGGCCGCCTTCGAGGAGTT
CGACGCCGGCGACGACGACTCCGACTCCGACTCCGAGTCCGAGGAGGTAGACGAGTACGA
CGTCGTCGTCGACGACGACGACAGCGAGGACGGCGTGGTGGTTCTTCCGCCGCCGCCGCC
GCCGCCGCCGGTGATTCCACATGAGCGCCATGGCGCGAGGCGGTTCCGCGGCGTGAGGAA
GCGGCCGTGGGGGAAGTGGGCGGCGGAGATCCGCGACCCCGTGCGCGGCGTGCGCGTCTG
GCTCGGTACCTTCCCCACCGCCGAGTCCGCCGCGCGCGCCTACGACGCCGCCGCCCGCCG
CCTCCGCGGCGCCAAGGCCAAGCCCAACTTCCCCTCCGCGCCGCCGCCCTCGGCTGCTGC
TCACCGCCGCAAGAAGCGCCGCGCCCACGCCGCCACGCGCTCGCCGTCGTCTCCGCCCGC
CACCAGCGAGGTCACGGCGGCGTCCGCGTCCGCGTCCAGCGATGTCCCCGCGCCGGCGTT
CGCTTCCTTCGTCGGCGAGCCCGGGCACGGCGGCGCCAAGTCGATGCCGACGACGAGCCA
CACCTCGCAGCCAGCCCCGCCGGCGACGGTGGCGTCCGAGAACGTCGACGACCCGGAGGT
GTTCGACCCGTACGACGTCCACGGCGGCCTCGCCTCCTACTTCGCCGGCGGCGCGTACGA
GTCCCTGGAGAGCCTGTTCGCGCACGGCGGCGACAGCGCCGCCGTCGACCAAGCGGCGAG
CGACCACTGGCCGGCGGCGCTATGGAGCTTCGCAGACGACGGCTCGTTCTGCTTCTGATG
CTGTCAAATCACATCGCCATTGGCGGCCATTGCAAGCCATGGCATGGCACCTGATGATGC
TGATCCAGCGAACTGGTCACTCGTTCTTGATGCGTTTTCAGTTTCTTGTACAGTGTTTTT
CCCCAGCAACAGTGAAGTAGTATTCAGTTATTCACTGTTCAGTCATGAGTTCATCGCAAA
ATATGATGTAAGTATGTGTCTTGAGATTGTTTTAGCAGTGGCTTTTGTTTGTATAATGTA
TTTCTCTGTAATTAATTAATAGCTGTTTTCAGTGATGAACT
clustalw multiple alignements is not computed in this case