cluster # 5178

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Oryza sativa
cluster # 5178 cluster # 5178 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5178#0 length = 2978 sequences # 3
consensusID : consensus_5178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2978
fasta sequence
                              [CCGCGAGGGTTTAGCTTTCCTTCTCCTCCCCGATGCCTCCGCCTCCGCCTCGCCGCGCGCTCCTCGTCCCCCTCCTCCGCCTCCGCGCCTTCTCCTCCTCCTCCTCCTCCCTCGCCCACCACCCCCCGTTGCCGCCTCCCCCGCGCCGCCACCAGTTCGTCGCCGCCGACGCCATCACCGGCCAGGGCGGCGGCGGCAATCCACTGGACCCGGCGCAGCTCCTCCGCGACGATCCGGTCGCCATAACCGCATCGCTGTGGGTCTCCTCCTTCCGCCCGCAGCCGACCGCCGCAGCGCCACCGCCGCCGTCGCTGTCGCCGTTCCTGTCGCGCCTCGAGCTCTGGGTGCTCGCGTACCAGAAGGCCTACGCCGACGAGACGGGCTCCTACCTGCCCCGCTCCTCCATCCCGGCCTCCACGCTCTCCTCCCTCCTCGCGCTCCGCAACGCCGTCCTCGACGCCCGCTTCCGCTTCGGCAACCGCCTCACCCCCTTCCTCCGCTCCCCGCGCGCCGCCGCCGCGGCGCAGGACCCCGCCACGCTCTCCAAGCGCAAGCTCCGCGCCCTCCTCACCACCCCGGGGCCGGCCCCGTTCCAGGACCGCGTCGTGCAGGAGCTCCTCCTCCTCCTGCTCGAGCCCGTCTACGAGGCGAGGTTCTCACCCAAGTCCTTCGCCTTTCGCCCCGGCCGATCTCCGCACGCCGCCATCCGCACCATCCGCCGCAGCTTCGCGCCCTACCTCTGGTACATCAAGGGTGACCTCTCCCCGCTCCTCCACTCCCCGGACCCTGCCCTGGTCGTCGGCGCGCTTATCCGCGATGTGCGCGACAAGAAGGTCGTTGATTTGGTTCGTTCGGCATTGCTCACCCCACCTGTGACCGCGAGGCCCGGCGATGAAGATGCGGCGAAGAAGAAGAAGAAGAGGAAGTACCAGAAGAAGAAGGTGCTTCCAGAGGGAGAGCCGAAGCCTGACCCCTACTGGTTACAGACATTCTTTGGGTTTGCGCCGGAGGAGGCACTCACCCAGCCTGATTGGGGGCATTGTGGAGTGCTGAGCCCATTGCTTGCCAATGTGTGCTTAGATGAGCTTGATAAATGGATGGAGGAGAAGATTAAGGAATTGTACAGGCCGTCCAAGTCGGATGTTGTGGGAGGGGAGGATGGAGTTGAGCAGGGGAACACTTCATGGCCAGAGTTTGTCCCCACGAGCGGCCCTGACAAAACGAGGAAGGTGGACTACATTCGATTCGGTGGCCATTTCTTAATCGGGGTGAGGGGTCCGAGGGCAGATGCAGCAGTGCTCCGAAAACAGCTTGTTGAATTCTGCGACCAGCGGTTCAGGATCAAGCTTGACAACGAGAGCCTCCCGATCGAGCATATCACTAAAGGGATCATGTTCCTTGATCATGTGCTGTGTCGTCGTGTTGTGTACCCGACTCTCCGTTACACAGCCACTGGAGGCAAGATCATCAGCGAGAAGGGGGTTGGGACTCTGCTCTCTGTGACAGCCAGTTTGAAGCAGTGCATCAAGCAGTTCCGGAAGCTTGAGTTTTTAAAGGGGGACCGTGAACCAGACCCACAACCGTGCTTCAGGATGTTCGATGCCACACAAGCTCACACAAACGCGCAGATGAATAAGCTCTTGCTGACAATGGCAGAATGGTATCGTTATGCTGATAACCGCAAGAAGGTTGTCAACTTCTGCTCATACATTATAAGGGGGTCCTTGGCAAAGTTATATGCTGCCAAATACTAATTGAGGTCGAGGGCAAAGGTCTACAAGATTGCTTCAAGGAATCTTAGTCGACCATTGAAGGATAAGAAAGGGCAGTCGCCGGAGTACCACAATCTGCTGAGAATGGGTCTTGTGGACTCAATTGATGGACTTCAGTATACACGGATGTCGATGGTTCCTGATCCTGATTACACACCATTACCAAGTGGATGGCGCCCTGACCATGAAAAGATTTTGCTGGAGTATATAAAGCTCACAGATCAACAAACCCTGGATGAGCAGCGAAGCTGCATTAGGGAGGAAGGACTTATAACTCCACAGGACTACATTTCAATGCTTGTATGGAGCTACAAGAAAAATGCAGTTTTACTACCTTCGTTCAAAGAGAATGATCACAAAGGATCCACAGAGGACTTGGGTTCAGATACAGATGAATTGGGTGATGAGGAAATAGGAAATCTGGACCATGTCGATTCCCCAAAGGTTGCTGAAATGCCATGAGTGTTGAA-TTGATGAAAATGACTACTACTCTCATACTCTGAAGGGGCAGTTAACAAGATAGCTGACTGATGCTGCTGGAGTTGCAAGAAATCAACTAACTCGTGGTGAACATAAACTATGGTATAGAGCTGTAATGTGCCTGTCAAATCTCTTGCAATCAGCTGGGCTGGTTCCTAAGTGCCTAACTAGATGTCTGATTCCTACTCAGGGACATCAAATTTTGTGCAGCTTCAACTTCAACAATATTTCTCAATACTCAGGATTATATTGGATGCTTGCTGCGGTGAGAAAGAAGCCAGAATGGACATTCAGAGGATCAAACTTTGCTGCCAGACTGTGCATCTGCATGCAGAACCAGCTGCTTACCGCCAAGCTTATATTTTAGTAAGACTAGCGGCCTTACCAATCCTATTTATACATCTCCAGCGCATTTGGAAAAATCACAGTGTACACATTCTGCCCAAACGTCCTGTTCGTGCAATTTTCTACTCATCTGTAGAATGTTTTACAGAAAGCAGAGGTCACAGAATTTACTTATAGATGATACTAAGTAGCATCCTTGCTTTTTGGTAGATTTGCTTATCTATTGCTTTTTACCATATTGTGGTCTAATTAGGCTGATTGGATGCTTGGTCAGTTATTCTTAAAGATATGACTGGAAACTCTATCTAATAGAATTGTATTTGTTCTATCTGTTGGTTCTTATGTTTATAACATTTGTCTTTTTAAGCAAAAAAAAGGAAA]

[+] EMBL AK072336             [CCGCGAGGGTTTAGCTTTCCTTCTCCTCCCCGATGCCTCCGCCTCCGCCTCGCCGCGCGCTCCTCGTCCCCCTCCTCCGCCTCCGCGCCTTCTCCTCCTCCTCCTCCTCCCTCGCCCACCACCCCCCGTTGCCGCCTCCCCCGCGCCGCCACCAGTTCGTCGCCGCCGACGCCATCACCGGCCAGGGCGGCGGCGGCAATCCACTGGACCCGGCGCAGCTCCTCCGCGACGATCCGGTCGCCATAACCGCATCGCTGTGGGTCTCCTCCTTCCGCCCGCAGCCGACCGCCGCAGCGCCACCGCCGCCGTCGCTGTCGCCGTTCCTGTCGCGCCTCGAGCTCTGGGTGCTCGCGTACCAGAAGGCCTACGCCGACGAGACGGGCTCCTACCTGCCCCGCTCCTCCATCCCGGCCTCCACGCTCTCCTCCCTCCTCGCGCTCCGCAACGCCGTCCTCGACGCCCGCTTCCGCTTCGGCAACCGCCTCACCCCCTTCCTCCGCTCCCCGCGCGCCGCCGCCGCGGCGCAGGACCCCGCCACGCTCTCCAAGCGCAAGCTCCGCGCCCTCCTCACCACCCCGGGGCCGGCCCCGTTCCAGGACCGCGTCGTGCAGGAGCTCCTCCTCCTCCTGCTCGAGCCCGTCTACGAGGCGAGGTTCTCACCCAAGTCCTTCGCCTTTCGCCCCGGCCGATCTCCGCACGCCGCCATCCGCACCATCCGCCGCAGCTTCGCGCCCTACCTCTGGTACATCAAGGGTGACCTCTCCCCGCTCCTCCACTCCCCGGACCCTGCCCTGGTCGTCGGCGCGCTTATCCGCGATGTGCGCGACAAGAAGGTCGTTGATTTGGTTCGTTCGGCATTGCTCACCCCACCTGTGACCGCGAGGCCCGGCGATGAAGATGCGGCGAAGAAGAAGAAGAAGAGGAAGTACCAGAAGAAGAAGGTGCTTCCAGAGGGAGAGCCGAAGCCTGACCCCTACTGGTTACAGACATTCTTTGGGTTTGCGCCGGAGGAGGCACTCACCCAGCCTGATTGGGGGCATTGTGGAGTGCTGAGCCCATTGCTTGCCAATGTGTGCTTAGATGAGCTTGATAAATGGATGGAGGAGAAGATTAAGGAATTGTACAGGCCGTCCAAGTCGGATGTTGTGGGAGGGGAGGATGGAGTTGAGCAGGGGAACACTTCATGGCCAGAGTTTGTCCCCACGAGCGGCCCTGACAAAACGAGGAAGGTGGACTACATTCGATTCGGTGGCCATTTCTTAATCGGGGTGAGGGGTCCGAGGGCAGATGCAGCAGTGCTCCGAAAACAGCTTGTTGAATTCTGCGACCAGCGGTTCAGGATCAAGCTTGACAACGAGAGCCTCCCGATCGAGCATATCACTAAAGGGATCATGTTCCTTGATCATGTGCTGTGTCGTCGTGTTGTGTACCCGACTCTCCGTTACACAGCCACTGGAGGCAAGATCATCAGCGAGAAGGGGGTTGGGACTCTGCTCTCTGTGACAGCCAGTTTGAAGCAGTGCATCAAGCAGTTCCGGAAGCTTGAGTTTTTAAAGGGGGACCGTGAACCAGACCCACAACCGTGCTTCAGGATGTTCGATGCCACACAAGCTCACACAAACGCGCAGATGAATAAGCTCTTGCTGACAATGGCAGAATGGTATCGTTATGCTGATAACCGCAAGAAGGTTGTCAACTTCTGCTCATACATTATAAGGGGGTCCTTGGCAAAGTTATATGCTGCCAAATACTAATTGAGGTCGAGGGCAAAGGTCTACAAGATTGCTTCAAGGAATCTTAGTCGACCATTGAAGGATAAGAAAGGGCAGTCGCCGGAGTACCACAATCTGCTGAGAATGGGTCTTGTGGACTCAATTGATGGACTTCAGTATACACGGATGTCGATGGTTCCTGATCCTGATTACACACCATTACCAAGTGGATGGCGCCCTGACCATGAAAAGATTTTGCTGGAGTATATAAAGCTCACAGATCAACAAACCCTGGATGAGCAGCGAAGCTGCATTAGGGAGGAAGGACTTATAACTCCACAGGACTACATTTCAATGCTTGTATGGAGCTACAAGAAAAATGCAGTTTTACTACCTTCGTTCAAAGAGAATGATCACAAAGGATCCACAGAGGACTTGGGTTCAGATACAGATGAATTGGGTGATGAGGAAATAGGAAATCTGGACCATGTCGATTCCCCAAAGGTTGCTGAAATGCCATGAGTGTTGAA TTGATGAAAATGACTACTACTCTCATACTCTGAAGGGGCAGTTAACAAGATAGCTGACTGATGCTGCTGGAGTTGCAAGAAATCAACTAACTCGTGGTGAACATAAACTATGGTATAGAGCTGTAATGTGCCTGTCAAATCTCTTGCAATCAGCTGGGCTGGTTCCTAAGTGCCTAACTAGATGTCTGATTCCTACTCAGGGACATCAAATTTTGTGCAGCTTCAACTTCAACAATATTTCTCAATACTCAGGATTATATTGGATGCTTGCTGCGGTGAGAAAGAAGCCAGAATGGACATTCAGAGGATCAAACTTTGCTGCCAGACTGTGCATCTGCATGCAGAACCAGCTGCTTACCGCCAAGCTTATATTTTAGTAAGACTAGCGGCCTTACCAATCCTATTTATACATCTCCAGCGCATTTGGAAAAATCACAGTGTACACATTCTGCCCAAACGTCCTGTTCGTGCAATTTTCTACTCATCTGTAGAATGTTTTACAGAAAGCAGAGGTCACAGAATTT                                                                                                                                                                                                                    ]
[+] EMBL CB648134             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTCCTTGATCATGTGCTGTGTCGTCGTGTTGTGTACCCGACTCTCCGTTACACAGCCACTGGAGGCAAGATCATCAGCGAGAAGGGGGTTGGGACTCTGCTCTCTGTGACAGCCAGTTTGAAGCAGTGCATCAAGCAGTTCCGGAAGCTTGAGTTTTTAAAGGGGGACCGTGAACCAGACCCACAACCGTGCTTCAGGATGTTCCATGCCACACAAGCTCACACAAACGCGCAGATGAATAAGCTCTTGCTGACAATGGCAGAATGGTATCGTTATGCTGATAACCGCAAGAAGGTTGTCAACTTCTGCTCATACATTATAAGGGGGTCCTTGGCAAAGTTATATGCTGCCAAATACAAATTGAGGTCGAGGGCAAAGGTCTACAAGATTGCTTCAAGGAATCTTAGTCGACCATTGAAGGATAAGAAAGGGCAGTCGCCGGAGTACCACAATCTGCTGAGAATGGGTCTTGTGGACTCAATTGATGGACTTCAGTATACACGGATGTCGATGGTTCCTGATCCTGATTACACACCATTACCAAGTGGATGGCGCCCTGACCATGAAAAGATTTTGCTGGAGTATATAAAGCTCACAGATCAACAAACCCTGGATGAGCAGCGAAGCTGCATTAGGGAGGAAGGACTTATAACTCCACAGGACTACATTTCAATGCTTGTATGGAGCTACAAGAAAAATGCAGTTTTACTACCTTCGTTCAAAGAGAATGATCACAAAGGATCCACAGAGGACTTGGGTTCAGATACAGATGAATTGNGTGATGAGGAAATAGGAAATCTGGACCATGTCGATTCCCCAAAGGGTGCTGAAATGCCATGAGTGTTGAATTTGATG AAATGACTACTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB648135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGAA TTGATGAAAATGACTATTACTCTCATACTCTGAAGGGGCAGTTAACAAGATAGCTGACTGATGCTGCTGGAGTTGCAAGAAATCAACTAACTCGTGGTGAACATAAACTATGGTATAGAGCTGTAATGTGCCTGTCAAATCTCTTGCAATCAGCTGGGCTGGTTCCTAAGTGCCTAACTAGATGTCTGATTCCTACTCAGGGACATCAAATTTTGTGCAGCTTCAACTTCAACAATATTTCTCAATACTCAGGATTATATTGGATGCTTGCTGCGGTGAGAAAGAAGCCAGAATGGACATTCAGAGGATCAAACTTTGCTGCCAGACTGTGCATCTGCATGCAGAACCAGCTGCTTACCGCCAAGCTTATATTTTAGTAAGACTAGCGGCCTTACCAATCCTATTTATACATCTCCAGCGCATTTGGAAAAATCACAGTGTACACATTCTGCCCAAACGTCCTGTTCGTGCAATTTTCTACTCATCTGTAGAATGTTTTACAGAAAGCAGAGGTCACAGAATTTACTTATAGATGATACTAAGTAGCATCCTTGCTTTTTGGTAGATTTGCTTATCTATTGCTTTTTACCATATTGTGGTCTAATTAGGCTGATTGGATGCTTGGTCAGTTATTCTTAAAGATATGACTGGAAACTCTATCTAATAGAATTGTATTTGTTCTATCTGTTGGTTCTTATGTTTATAACATTTGTCTTTTTAAGCAAAAAAAAGGAAA]




>consensus_5178#0
CCGCGAGGGTTTAGCTTTCCTTCTCCTCCCCGATGCCTCCGCCTCCGCCTCGCCGCGCGC
TCCTCGTCCCCCTCCTCCGCCTCCGCGCCTTCTCCTCCTCCTCCTCCTCCCTCGCCCACC
ACCCCCCGTTGCCGCCTCCCCCGCGCCGCCACCAGTTCGTCGCCGCCGACGCCATCACCG
GCCAGGGCGGCGGCGGCAATCCACTGGACCCGGCGCAGCTCCTCCGCGACGATCCGGTCG
CCATAACCGCATCGCTGTGGGTCTCCTCCTTCCGCCCGCAGCCGACCGCCGCAGCGCCAC
CGCCGCCGTCGCTGTCGCCGTTCCTGTCGCGCCTCGAGCTCTGGGTGCTCGCGTACCAGA
AGGCCTACGCCGACGAGACGGGCTCCTACCTGCCCCGCTCCTCCATCCCGGCCTCCACGC
TCTCCTCCCTCCTCGCGCTCCGCAACGCCGTCCTCGACGCCCGCTTCCGCTTCGGCAACC
GCCTCACCCCCTTCCTCCGCTCCCCGCGCGCCGCCGCCGCGGCGCAGGACCCCGCCACGC
TCTCCAAGCGCAAGCTCCGCGCCCTCCTCACCACCCCGGGGCCGGCCCCGTTCCAGGACC
GCGTCGTGCAGGAGCTCCTCCTCCTCCTGCTCGAGCCCGTCTACGAGGCGAGGTTCTCAC
CCAAGTCCTTCGCCTTTCGCCCCGGCCGATCTCCGCACGCCGCCATCCGCACCATCCGCC
GCAGCTTCGCGCCCTACCTCTGGTACATCAAGGGTGACCTCTCCCCGCTCCTCCACTCCC
CGGACCCTGCCCTGGTCGTCGGCGCGCTTATCCGCGATGTGCGCGACAAGAAGGTCGTTG
ATTTGGTTCGTTCGGCATTGCTCACCCCACCTGTGACCGCGAGGCCCGGCGATGAAGATG
CGGCGAAGAAGAAGAAGAAGAGGAAGTACCAGAAGAAGAAGGTGCTTCCAGAGGGAGAGC
CGAAGCCTGACCCCTACTGGTTACAGACATTCTTTGGGTTTGCGCCGGAGGAGGCACTCA
CCCAGCCTGATTGGGGGCATTGTGGAGTGCTGAGCCCATTGCTTGCCAATGTGTGCTTAG
ATGAGCTTGATAAATGGATGGAGGAGAAGATTAAGGAATTGTACAGGCCGTCCAAGTCGG
ATGTTGTGGGAGGGGAGGATGGAGTTGAGCAGGGGAACACTTCATGGCCAGAGTTTGTCC
CCACGAGCGGCCCTGACAAAACGAGGAAGGTGGACTACATTCGATTCGGTGGCCATTTCT
TAATCGGGGTGAGGGGTCCGAGGGCAGATGCAGCAGTGCTCCGAAAACAGCTTGTTGAAT
TCTGCGACCAGCGGTTCAGGATCAAGCTTGACAACGAGAGCCTCCCGATCGAGCATATCA
CTAAAGGGATCATGTTCCTTGATCATGTGCTGTGTCGTCGTGTTGTGTACCCGACTCTCC
GTTACACAGCCACTGGAGGCAAGATCATCAGCGAGAAGGGGGTTGGGACTCTGCTCTCTG
TGACAGCCAGTTTGAAGCAGTGCATCAAGCAGTTCCGGAAGCTTGAGTTTTTAAAGGGGG
ACCGTGAACCAGACCCACAACCGTGCTTCAGGATGTTCGATGCCACACAAGCTCACACAA
ACGCGCAGATGAATAAGCTCTTGCTGACAATGGCAGAATGGTATCGTTATGCTGATAACC
GCAAGAAGGTTGTCAACTTCTGCTCATACATTATAAGGGGGTCCTTGGCAAAGTTATATG
CTGCCAAATACTAATTGAGGTCGAGGGCAAAGGTCTACAAGATTGCTTCAAGGAATCTTA
GTCGACCATTGAAGGATAAGAAAGGGCAGTCGCCGGAGTACCACAATCTGCTGAGAATGG
GTCTTGTGGACTCAATTGATGGACTTCAGTATACACGGATGTCGATGGTTCCTGATCCTG
ATTACACACCATTACCAAGTGGATGGCGCCCTGACCATGAAAAGATTTTGCTGGAGTATA
TAAAGCTCACAGATCAACAAACCCTGGATGAGCAGCGAAGCTGCATTAGGGAGGAAGGAC
TTATAACTCCACAGGACTACATTTCAATGCTTGTATGGAGCTACAAGAAAAATGCAGTTT
TACTACCTTCGTTCAAAGAGAATGATCACAAAGGATCCACAGAGGACTTGGGTTCAGATA
CAGATGAATTGGGTGATGAGGAAATAGGAAATCTGGACCATGTCGATTCCCCAAAGGTTG
CTGAAATGCCATGAGTGTTGAATTGATGAAAATGACTACTACTCTCATACTCTGAAGGGG
CAGTTAACAAGATAGCTGACTGATGCTGCTGGAGTTGCAAGAAATCAACTAACTCGTGGT
GAACATAAACTATGGTATAGAGCTGTAATGTGCCTGTCAAATCTCTTGCAATCAGCTGGG
CTGGTTCCTAAGTGCCTAACTAGATGTCTGATTCCTACTCAGGGACATCAAATTTTGTGC
AGCTTCAACTTCAACAATATTTCTCAATACTCAGGATTATATTGGATGCTTGCTGCGGTG
AGAAAGAAGCCAGAATGGACATTCAGAGGATCAAACTTTGCTGCCAGACTGTGCATCTGC
ATGCAGAACCAGCTGCTTACCGCCAAGCTTATATTTTAGTAAGACTAGCGGCCTTACCAA
TCCTATTTATACATCTCCAGCGCATTTGGAAAAATCACAGTGTACACATTCTGCCCAAAC
GTCCTGTTCGTGCAATTTTCTACTCATCTGTAGAATGTTTTACAGAAAGCAGAGGTCACA
GAATTTACTTATAGATGATACTAAGTAGCATCCTTGCTTTTTGGTAGATTTGCTTATCTA
TTGCTTTTTACCATATTGTGGTCTAATTAGGCTGATTGGATGCTTGGTCAGTTATTCTTA
AAGATATGACTGGAAACTCTATCTAATAGAATTGTATTTGTTCTATCTGTTGGTTCTTAT
GTTTATAACATTTGTCTTTTTAAGCAAAAAAAAGGAAA
clustalw multiple alignements is not computed in this case