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Oryza sativa
cluster # 518 cluster # 518       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_518#0 length = 1136 sequences # 2  

consensusID : consensus_518#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1136
fasta sequence
                              [AGGACCCCTCGGCCCTAGCTCGGGCGAGGCGGCGGCGGTGGTTTGGCGATGCGCGGCGGCGGCGGTGGCGCTGGGCGGCGGCTCTGGTTCGGCGACACGTGGCGCCGGGCTGCGGCTCAGCGGTGCGTGGCGGCGGCGGCGGTGCGGTGGCGAAGCGGCGAGGTGGTGCGGCGGCGCGTGGCAGCGGCGACGCTGGGCGGTGGCTCAGCGATGCGTGGCGGCGGCGAGGTGGTGCGGCGGCGGTACCCCCATCCTCCTCCCCCTTCTTTCTCCCCTCCTCCCCCTTCCCGATCCGGTTTTTCTTGCAGCGAGGTGGTTCCAACGGCGAGCGGCAGTTCGGCGGCCTGCATCCTCGACCGCGAGGAGGAGGTGAGCGGCGGCGCCGCGGCCTCAATCCCCGTCCGCCTGGCGCCGGATCCGTCGTCCTCAACTGCCGGGCGTCGTCTCCTCCGTCCGCCGGCTGCGTCCCCAACTGCCGGGTGCAGATCCGCCCGTACGCCGCTTCCCGGGTGCACAATGCGAAGAGGGCGGCGTCGAGCAGCAATGGGGACGAGGTCGCCTCCAGACCGAGCTCAAGAAGGTCCAGCATGCCAAGGAGTTCAAGCCCATCGTGATTATTCCTCTTGTGAAGGCATTGATCGAGAAAGACAAGGAAGGAGACAAGAAGAAGGGCACCTTCGTTTTTTTTTTGTTGCTCGTCAGGTGTTTGATGAATTGCTTGCTTGCCATGGCTGTTTTATGTGTGATATGTTCATAAAGACTTTTATCTGTGATGAAATGTTCTAGATTTTTGTGTGTGATGAATGCGATGGCAACTACCCAGAAATACTTTTTTTTTGTTTTTTTTCATCGGAATCTACATCAGTGACGGGTGTTGAGCTGTGGTTGTGGCTCTTTTTTGCTTTTTTTTTTGGGGTGATTTTTCTCATATGTGACGGGTCACATGATACAACTCGTCAGAGGGGAATGACACCTCTGACGGACCTCCACCCGTCAAAGATGACTTGAGTCATCAGTGACCACTGATCTGTGACGAGGGGGTGTATCCGTCACAGATGAGAGTTTGAGCCCGTCACTGCTAACTTGTTTTGAGGTAGTGAACCAAGCAAATTGCGTTTAAAAAAAAAAAAAAAAGA]

[+] EMBL CB654315             [AGGACCCCTCGGCCCTAGCTCGGGCGAGGCGGCGGCGGTGGTTTGGCGATGCGCGGCGGCGGCGGTGGCGCTGGGCGGCGGCTCTGGTTCGGCGACACGTGGCGCCGGGCTGCGGCTCAGCGGTGCGTGGCGGCGGCGGCGGTGCGGTGGCGAAGCGGCGAGGTGGTGCGGCGGCGCGTGGCAGCGGCGACGCTGGGCGGTGGCTCAGCGATGCGTGGCGGCGGCGAGGTGGTGCGGCGGCGGTACCCCCATCCTCCTCCCCCTTCTTTCTCCCCTCCTCCCCCTTCCCGATCCGGTTTTTCTTGCAGCGAGGTGGTTCCAACGGCGAGCGGCAGTTCGGCGGCCTGCATCCTCGACCGCGAGGAGGAGGTGAGCGGCGGCGCCGCGGCCTCAATCCCCGTCCGCCTGGCGCCGGATCCGTCGTCCTCAACTGCCGGGCGTCGTCTCCTCCGTCCGCCGGCTGCGTCCCCAACTGCCGGGTGCAGATCCGCCCGTACGCCGCTTCCCGGGTGCACAATGCGAAGAGGGCGGCGTCGAGCAGCAATGGGGACGAGGTCGCCTCCAGACCGAGCTCAAGAAGGTCCAGCATGCCAAGGAGTTCAAGCCCATCGTGATTATTCCTCTTGTGAAGGCATTGATCGAGAAAGACAAGGAAGGAGACAAGAAGAAGGGCACCTTCGTTTTTTTTTTGTTGCTCGTCAGGTGTTTGATGAATTGCTTGCTTGCCATGGCTGTTTTATGTGTGATATGTTCATAAAGACTTTTATCTGTGATGAAATGTTCTAGATTTTTGTGTGTGATGAATGCGATGGCAACTACCCAG                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB654316             [                                                                                                                                                                                                                                                                                                                                                                                                                     CTGGCGCCGGATCCGTCGTCCTCAACTGCCGGGGGTTGTCTCCTCCGTCCGCCGGCTGCGTCCCCAACTGCCGGGTGCAGATCCGCCCGTACGCCGCTTCCCGGGTGCAGAAGGCGAAGAGGGCGGCGTCGAGCAGCAATGGGGACGAGGTCGCCTCCAGACCGAGCTCAAGAAGGTCCAGCATGCCAAGGAGTTCAAGCCCATCGTGATTATTCCTCTTGTGAAGGCATTGATCGAGAAAGACAAGGAAGGAGAGAAGAAGAAGGGCCCCTTCGTTTTTTTTTTGTTGCTCGTCAGGTGTTTGATGAATTGCTTGCTTGCCATGGCTGTTTTATGTGTGATATGTTCATAAAGACTTTTATCTGTGATGAAATGTTCTAGATTTTTGTGTGTGATGAATGCGATGGCAACTACCCAGAAATACTTTTTTTTTGTTTTTTTTCATCGGAATCTACATCAGTGACGGGTGTTGAGCTGTGGTTGTGGCTCTTTTTTGCTTTTTTTTTTGGGGTGATTTTTCTCATATGTGACGGGTCACATGATACAACTCGTCAGAGGGGAATGACACCTCTGACGGACCTCCACCCGTCAAAGATGACTTGAGTCATCAGTGACCACTGATCTGTGACGAGGGGGTGTATCCGTCACAGATGAGAGTTTGAGCCCGTCACTGCTAACTTGTTTTGAGGTAGTGAACCAAGCAAATTGCGTTTAAAAAAAAAAAAAAAAGA]


>consensus_518#0 AGGACCCCTCGGCCCTAGCTCGGGCGAGGCGGCGGCGGTGGTTTGGCGATGCGCGGCGGC GGCGGTGGCGCTGGGCGGCGGCTCTGGTTCGGCGACACGTGGCGCCGGGCTGCGGCTCAG CGGTGCGTGGCGGCGGCGGCGGTGCGGTGGCGAAGCGGCGAGGTGGTGCGGCGGCGCGTG GCAGCGGCGACGCTGGGCGGTGGCTCAGCGATGCGTGGCGGCGGCGAGGTGGTGCGGCGG CGGTACCCCCATCCTCCTCCCCCTTCTTTCTCCCCTCCTCCCCCTTCCCGATCCGGTTTT TCTTGCAGCGAGGTGGTTCCAACGGCGAGCGGCAGTTCGGCGGCCTGCATCCTCGACCGC GAGGAGGAGGTGAGCGGCGGCGCCGCGGCCTCAATCCCCGTCCGCCTGGCGCCGGATCCG TCGTCCTCAACTGCCGGGCGTCGTCTCCTCCGTCCGCCGGCTGCGTCCCCAACTGCCGGG TGCAGATCCGCCCGTACGCCGCTTCCCGGGTGCACAATGCGAAGAGGGCGGCGTCGAGCA GCAATGGGGACGAGGTCGCCTCCAGACCGAGCTCAAGAAGGTCCAGCATGCCAAGGAGTT CAAGCCCATCGTGATTATTCCTCTTGTGAAGGCATTGATCGAGAAAGACAAGGAAGGAGA CAAGAAGAAGGGCACCTTCGTTTTTTTTTTGTTGCTCGTCAGGTGTTTGATGAATTGCTT GCTTGCCATGGCTGTTTTATGTGTGATATGTTCATAAAGACTTTTATCTGTGATGAAATG TTCTAGATTTTTGTGTGTGATGAATGCGATGGCAACTACCCAGAAATACTTTTTTTTTGT TTTTTTTCATCGGAATCTACATCAGTGACGGGTGTTGAGCTGTGGTTGTGGCTCTTTTTT GCTTTTTTTTTTGGGGTGATTTTTCTCATATGTGACGGGTCACATGATACAACTCGTCAG AGGGGAATGACACCTCTGACGGACCTCCACCCGTCAAAGATGACTTGAGTCATCAGTGAC CACTGATCTGTGACGAGGGGGTGTATCCGTCACAGATGAGAGTTTGAGCCCGTCACTGCT AACTTGTTTTGAGGTAGTGAACCAAGCAAATTGCGTTTAAAAAAAAAAAAAAAAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)